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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0447800 |
| Transcript ID | LotjaGi4g1v0447800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT4G29100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68; TrEMBL-Plants: tr|K7KRP1|K7KRP1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0447800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82022767..82027131) extracted from Lotus japonicus Gifu genome v1.2.
AAGAGAGGAAGCAAAGACAAAAAAGGTTCTCAAAACTCCATAATTATTCAAATTCTCCTAAAAAAACAGTACCAATAAGC AGTAGTGTTCCCCCCTACTTAATCAACCACAGGAAGACCTCACAAAGTTTCTAGCTACAAAGACCATAGACATAAGAAAG AAAAAGATAGAAAGAGGGAGAGAGGGGGAAAGAGAAAGGAAAACATCTTTTTTTTCCTTTACAGTGATCATCTCAGGGAA AGAAAAAGAAAGGCATGAATAGAAGTGTCTTGCAAAGCTCCCCGGTGCAACAAATGATGGCTGGGAACCCTAACAACTTG TGGAACTTCAACACCATGCACTCTCCTTCTCAACAACCTTCTCCTAATTTCTTTTCCAATTCTTCTAATAACTTCCTAAC CCCACATCATGCCCCTCCTTCTTCTTTTCCTTTTCCTCCTTGGCATGACAATCAAGAGCTTCCTGAGTCATGGAGCCAAT TACTCATGTAACTATCTCTATCTCTTCCTCCCTCCCTCCCTCCCTCTCTTTGGGGGTTGAATTTGGGCAGAGTTAGAATT AACCCGAATTCTAAGATGATCCATATATTAGACTGGGAGGAATTACCACACAATAATTTGATTTATTCTTAACATTATAT GTATATTAAGTGTATTAATTGCTTCCAAAATAAATTTATTATTTCAATACTACATCTTTATGCATGTGTGTGTGTGTGTA TATATACATGCTATCTGCTAAACTTAAAGTTTTTGGATCAGTCCTGGTCGCTTCGCTGCATATAGACAACCATATGCATG GCAAGGCATGGTGTTGAAATCTATGTTTGAGTGCTTGAAGAATATCAAGTCTAATGGCTTTGTTTTTTGATCTTTTGGTA TTGTGTTGGAAACTGCAGGAGTGGACTTATGTCTGAAGAAGACAAGGCTGGCATGTGCCAAATGCTAATAAGTCAGGCTT CAAATACTTCTCTTGTTGATGTTAAGCAAGAAAGCTCAGCAAATAGCTATGTTTTTGGACATGGTAATGAAGAATTTCAG GCAGCAAACCCCACCTGGTCTCAACTAGGATCTGGTTCTTCTTCTTCTTCCAAATCTAGTGGTACAAGTTTCAGCAGCAG TGTGTTGGATTTCTCTAACAATAAGACAGATGCAAGGCCTCTTGCATCAGATCCATCTTCTGAGGTACAAGAAATTAAGA TAACTCATGTAAATCCCTGATTAAAAGTGAGAATTAATTTGCAATTATGCATATTTGTTTATATTTTTTCTTTTCTTAGT TTGGGTGAGTTAATTACTCATAATATTTAATTTTCATGAAACTTTACTAATTTTCATTTGAAACCTTCAAATTAAGCCAT GCTTTCACATTTCAGAATACTTGATCAAATTAATTAAGTTTTATTTCCCAAAAAATTAACATGTTAATTAATATATATTT ACTAAAGCTAGCCTCTAACTAATTCTTTTAACTAAAATATGAACATATACAAAGAGGTTCTTCTTTATATTCTTTTCTTT GTTTGAGATAAAAAAAAATGGATTGCTTTGTTTTCTTTATCTTTTTAAAATCAAAACAAGTGCTAATGTATACCTCCTGG GTGAGTTTTTAGTTTAATTTAGTTAAGATTATGAATCCTCACGCAATAAAATTCCATTTTTTCCTTTTGGTTTTTACTCT TTTTTAATCTTCTATTTTTATTATAATGTTTAATTAATTACATGTCATTCTTTCTTTCTCATGAAGTGCAATAGCACTGG AGCTGGTGGGGCATTCAAGAAAGCTAGGGTTCAACCATCTACAACTCAATCTACCTTCAAGGTATATACTATTGAAAACA ATACTAGGCAGAAACTTCCAATCCTGAACTCTCTTTCATGCAAAACACACACAATTAAACACTCAAAAACATCATATGTG GTTGGTGACTGTTGTCTTTCTTGATTGTCTTATTCCCAATAATCATCATGGTATTTTATCTCTCTTTCTCATTTTTATCT CAAAGAAAGTGGAGAATATTATCAACACAAGCCAACACATTGAAACAATTAAAATATATTTAACTTTTAAGCTTTTACTT GTCCAACACAGTTATGCATATGATATCTTTCTCTGCGTTTCAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACAGCCC TTCATCAACTCGTTTCCCCATTTGGGAAGGTACACCTAGTTTATTCAATTGAAAATTAATGCATATTATAAACACACACA ATATATCTTACAAACTGTTCGAACCTATTGTTAATTAAACCTCTCATAATTATTTTTCTCCTCATACAACCTACTCTTTT GGATTGACAAAAACACACAATTCAAAGCACAGTAATTCTAAAAGCTACATTTTGTTGCTTTTCTTTACAATTATAGAACT TCTCACTTCCAAACCAAACATACTATTAGTACCTTCTCTTTTATTAACTTTTTTTCTCAAGAAAATCAACCTAATTGCTA AACATGGTTGAATCCAAACATACTATTAGTACCTTCTCTTTTATTAACTTTTTTTCTCAAGAAAATCAACCTAATTACTA AACATGGTTGAATCAGCTTCTCTTTTAGCAAAATTAATTCTGAACCCCAAGAACCTACTTATAAAAACTTCTCCGTATAA TTAGCTATGTCTTCAAAATTAATTGGGGAAGACTTTTCAAACATGCACATTTCAAACACACTTAATAAATTTGAGCATTA CATGGATGAATGCGTGGGAATATGACAGTGGTGGTATGGTGTGGTATTTTTTTTCACTTTTGCAGACTGACACAGCCTCT GTCTTATTAGAGGCTATTGGTTACATCAGATTCCTTCAGAGTCAAATTGAGGTAATGTTTCTTCTTTTTCCCACTCTGCT TTTTCCAAACAACCACGAGTAACTGCAGAATAGTGATGGCACGCTGTTAGAAAGTACATTCACCTTGTGCTTCTACATGT TTACACCTTTACTTTTCAAAGTTCTGTCTTAAAAATACTCTTTTCCTTTTTTTTCAGGCTCTTAGCTTGCCATACTTGGG GAGTGGATCAGGGAACATGAGGCATCAACAATCTGTAAGAAATAAAATATATTATCAACCCATTTCTGGTTAATTACCAC ATAAAGCTGTTTTTCACTTCCCAAAGCAACAAAGAATAATCACTCTTTCTTATTCCTGCATGTGCACGACCAGCACAAAT ACTAATTGAGTAATTATGTGGTACTAATTGAGTTATATTATTTTAATGGTAGGTTCAAGGAGATCAGAGGAATTGTATAT TCCCTGAAGACCCTGGTCAGGTATCCTTTTACCTTGGATCCATTAAACCCTTCATGATCACTTTTAGATAGAAGTCACAA ATTGTGGTTTATGATGTTTGGAAATCATTTTACACAATTGATTGTGAAATAAAATAAATTATGTGAAGAAGAGTAGCTTC TGAATGTTAGAATTAATTATGAAATCTGAGAAAAGATAACTTGATTCAAATATGTTAGAAGATTTCGTACTTTGAATTGT ATGGTAACCGCAATCCAAACACGCTATTACATAGTTGAATTCTTATCAAAATCCCATTTTACTTTACTTTCTGGTTTGTA GCTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAGCTGGTGATCAGGTAAATATGCATGTGGGTTCAATTATTATTTTTC CTTCTTAATATAATGATCAAAATAATTCAACAATATGTTCTGATTAATTTTACTGTCTTAATTGTTAGGATTCACAAGAA GAACAAAAGAAGGATCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTTTCATGCACACTCCAAGTTGGAAGTGACAATGG AGCTGATTATTGGGCTCCTGCTTTTGGAGGGGGATTTCGTTAATTAGATCTGGTTTTAGCCTATTAACTGATGCAGCATA TATACATATATCTATCTAGCTATATATATGTGGGCAGCATTTAGAGAGAAAATTGATGGAAATTGTATAACATCATGAGC AGTCAATCTGCAACAAGATCCAAGGCTGATTGCTCATGATGCTATATATGCACACCATTCCTCATGAATAATTTGTGTGT TGCTCGCTGCAGTCAACTATACATTTGCAAACCCTTGTTAATTAGCAGTCTTCAATTTATGCAAATCAAGCTTTTACTTA GTTTCATTACCCTAACTATAGTAGTATATTATATAACGTCATATATATGCGCTAGATCAGTTCTAATTTTAATTTATGCA TGCAATAATTGTTATGAATATTAATCATCTACCTCATATTATATAAATGTTTGATTTTCAGTTAGTCCCCTCACATTACT TATAACTTTGTGTTTTTGGATAATTTAAAAGCACATTCACCTATC
CDS sequence (LotjaGi4g1v0447800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATAGAAGTGTCTTGCAAAGCTCCCCGGTGCAACAAATGATGGCTGGGAACCCTAACAACTTGTGGAACTTCAACAC CATGCACTCTCCTTCTCAACAACCTTCTCCTAATTTCTTTTCCAATTCTTCTAATAACTTCCTAACCCCACATCATGCCC CTCCTTCTTCTTTTCCTTTTCCTCCTTGGCATGACAATCAAGAGCTTCCTGAGTCATGGAGCCAATTACTCATGAGTGGA CTTATGTCTGAAGAAGACAAGGCTGGCATGTGCCAAATGCTAATAAGTCAGGCTTCAAATACTTCTCTTGTTGATGTTAA GCAAGAAAGCTCAGCAAATAGCTATGTTTTTGGACATGGTAATGAAGAATTTCAGGCAGCAAACCCCACCTGGTCTCAAC TAGGATCTGGTTCTTCTTCTTCTTCCAAATCTAGTGGTACAAGTTTCAGCAGCAGTGTGTTGGATTTCTCTAACAATAAG ACAGATGCAAGGCCTCTTGCATCAGATCCATCTTCTGAGTGCAATAGCACTGGAGCTGGTGGGGCATTCAAGAAAGCTAG GGTTCAACCATCTACAACTCAATCTACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACAGCCCTTCATCAAC TCGTTTCCCCATTTGGGAAGACTGACACAGCCTCTGTCTTATTAGAGGCTATTGGTTACATCAGATTCCTTCAGAGTCAA ATTGAGGCTCTTAGCTTGCCATACTTGGGGAGTGGATCAGGGAACATGAGGCATCAACAATCTGTTCAAGGAGATCAGAG GAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAGCTGGTGATCAGGATT CACAAGAAGAACAAAAGAAGGATCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTTTCATGCACACTCCAAGTTGGAAGT GACAATGGAGCTGATTATTGGGCTCCTGCTTTTGGAGGGGGATTTCGTTAA
Protein sequence (LotjaGi4g1v0447800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRSVLQSSPVQQMMAGNPNNLWNFNTMHSPSQQPSPNFFSNSSNNFLTPHHAPPSSFPFPPWHDNQELPESWSQLLMSG LMSEEDKAGMCQMLISQASNTSLVDVKQESSANSYVFGHGNEEFQAANPTWSQLGSGSSSSSKSSGTSFSSSVLDFSNNK TDARPLASDPSSECNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQ IEALSLPYLGSGSGNMRHQQSVQGDQRNCIFPEDPGQLLNENCLKRKAAGDQDSQEEQKKDLRSRGLCLVPVSCTLQVGS DNGADYWAPAFGGGFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 332 | 332 | 5.5E-117 | – | |
| PANTHER | 1 | 332 | 332 | 5.5E-117 | – | |
| MobiDBLite | 29 | 52 | 24 | - | – | |
| MobiDBLite | 29 | 53 | 25 | - | – | |
| MobiDBLite | 160 | 196 | 37 | - | – | |
| MobiDBLite | 160 | 178 | 19 | - | – | |
| ProSiteProfiles | 188 | 237 | 50 | 11.553 | ||
| Gene3D | 195 | 247 | 53 | 1.7E-5 | ||
| CDD | 198 | 242 | 45 | 3.08386E-6 | ||
| SUPERFAMILY | 198 | 248 | 51 | 4.71E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi4g1v0447800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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