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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0451100 |
| Transcript ID | LotjaGi4g1v0451100.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-hydroxyisobutyryl-CoA hydrolase-like protein; TAIR: AT4G13360.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Swiss-Prot: sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial; TrEMBL-Plants: tr|A0A0B2Q5M9|A0A0B2Q5M9_GLYSO 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial; Found in the gene: LotjaGi4g1v0451100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82318415..82323725) extracted from Lotus japonicus Gifu genome v1.2.
GAACTAATCGAATTCTGAGCTTACTCACTTTCTCTCTCACCAAACCTTCTTCTTCTTCTTCTTCTTCCTCCATCACTTTC CGATCATTCTCCGCCATGGCCGCCGAAGATGATTTCGTCAAGGGCACTGTTCATTCCAACGGCGTCGCTGTCATCACGCT CGATCGCCCCAAAGCTCTCAACGCCATGAACCTAGGTTTTTTCCTCATCCCTCTAATTATTATGCATGCTGTGTTGTGTG TTCTCTCTAGAACAATTGCTCGAGCTTCTCGATTACTTGGAAATTGCTGTTTCAGATTAGTGTCATTAGGTCCAGTACAA TTTAGGTCAATTTTCATTCAATTTGATGGGAATCAATGATGATCATAGAAATTGATTGTTGAGAAAACTAGGGTTTCTGG TGATGTATATGTTGTAAATTAGTTCATTTTTTTGAAATAGTTTTGAGTTAATTATGTAGGATTTGAAGGGGGGAAATGAG GATTTCTCTGTGTAAGTAGTTACCTTACCTCCTGTTGATTTTGACTTGACAATCTTAATGGTGCAGATATGGATGTAAAG TATAAAAGTTATCTTGATCAATGGGAATTGGACCCGAGGGTCAAATGTGTGCTGGTTGACAGCAGCTCGCCTCGCGCCTT TTGTGCTGGTATGGTTTTTGAGAGTCGTCGTTGTGAGAAATAATGCGTAGTTCGTCTATCTTTTAATGCAACATTTTATG GAAAGCATGCTTCTAGCTTGGATAGATTATGAATTAACTTCTTTTGCAGATGTTCTGTTTTAGATTTGAGATTATTTTGG TTTAGAGTGCTGGGTAAGGTTTTGAGAGTCACCTCTGATGGTCAATGCAGGTATGGATATTAAAGGGGTTGTTGCTGAAA TACAAAAGGACAAAAGCACACCTTTAGTGCAGAAGGTCTCATTATATTATTTGTTTTCAACCTCAAGTGTATTAATGCAA TGCATGCATGTCCAGTTGCAGTTTTGATGTGCTTCATTGGATATATAGTTTGCTTTTCTGTCAACATCAACATCTTCTTT GGATGCTACACTGCCTGCTGTTTTATAGTTTATGTTTTGTTAAATAATTTTTTTCTCTATCCCCAAATCTTCTTTCTTGG TGACCGAGATCTTAGTTTATCTGCAGGCGGTGATGTGAAGCAGATAATAACCAAGAACCACCTGTCAGATATGATTGAGG TCTAGTTGTGTCCTTTGAAATTAAATGCTATCAGACTCATACCCCCTTTGCTTTATTAAAACCATGCCAATACTAGATGA ATATATTTTTTGTTGGAATATTTTGCATTTATAAACTATAATCTCTTTACTTAATCACTAGTATGTTTGGATATGCAATA GAACAACCCAAACATGATTTTGGAAGCATTTAATGTGATTTTACACGAAAATTATGTCTTTTCTAAAACCAAAACTAAGT TGTCTTGAAAGCATGGTTGTGTTGAAATGTAAAGATGATACTTTTACGTTGAGTTTAGATTTTTGTACTAATTTATATTT CTAGCTTACTTTTAAGATAAAAGCTTCCAAACACATTATATCACTTGAAACTTAATTCCAGTCAAAATCAACTTGTAAAA TCAAGATCAACAATCAAGTTGTCAAACACTCATCCATGTCAAATTTTGCTCGTGTCAGCATTGATGGCTTTTAAAAACTT CGACATTTTAAAATGATTTGTAATATCTAGTTATTGAGGAAGTTTCATACTAACGTTAATCCAAAATGAAGTGTATAAGA TATGCAACTCTTACTCTATGATTGAAGAAGTCATCACTGCGACATTGTTTTTGTTAAGCCACAAGGTAATCCCACACCCA AAGATGTGTGGGACTAATAACTGCTTGGGTGTTGGTTTTCCCTTGGCCACAAGGTGTTTCAAGTGGAGGTCCTACTAATT CCCCATATGTTGCAAATGTACTAGTTTCTTTCATTTCAAGACCACCATTTTGACAGTCTTTTGCCCCTCGATGTTGAATT TCTTTTGGGTGTTTTATTGTTTGTACTGCTAGAATTACATCTGTAGTGTTAGAAATGTAATATAATATAAAATAATTCAT GTTTTCACTCAAAACTTACAGTTTTGAGATAGTTGGTTCTTAACATGGTATCAGAGTGGTCTAGAGTTCGATCATTGTTG CCATAATTATTTATAGTAAAAAAGTTAAATTTAGCACAAGGTAGGGGAGCTTGTGCATTATCCATGCTTCAAGCCCAACA AGCTCTTGCGTAATGGGGAATGTTAGAAATAGAATATAAAATCATCCAGTGTCTTCACTCAACTGGTTAAGATTTTGGGA TGTTGGTTCATGAATTACCGTTTGGCTGACCTTAGACAGGTTCTTTTCTCAGTTAGGTTTTAGAATTACCTGCTGAGTGA TCTCATATAGAAAAATACCACTCAAACTTAAAGGAAATTTTATTGCATATAACCTGCAATGTCATATGTGACTAAATGCT GAGTTGTTAAGAGCCAATGAGAAAGTAAACTAAGTGTTGTAAGGATGAGAATATTTTGACTTATGCTGGATGAGAGGTTA AATAAGATGAAATTGAATTAGGAATACAATTATTAGAGACAAAATTAGAGTAGCTCCTGTTGTAGGAAAGATGGTAAACA TGTAAAGTATCTTCGTTAGTGGTAAGGTATGTGGGAAAGCACTGGCTAGGATGGTTGATCAAATGGAAGATAGTCCAATA ATTAGTAGAGGGAGACCAGGGAAAACTGTAAGTCAAACAATTAAGAGAGATTTATTGGTAAACTGTCTATGTTTAAACTT AACACATAGCATTATGGGATTGCATGGCTCTTGTAACGGACTCCACCTTGTTTAAAATGTCCATGTGTGTTGCTGGTTTC ATACTGATTGCTGTCAGAACTATGTTGGATTGTGTGTTTTGCTGCATTTTATATTTTTGCATTAGTTGCTTGTACTGTGT TGAAATAATATATCTATTATGCTGCATATTTTAGGTCTTCACGGCTGAGTATTCTTTGATATGCAAAATTGCTGAGTACA AGAAGCCATATATAAGCTTCATGGATGGAATTACAATGGGTTTTGGAATTGGCTTATCTGGTCATGGCCGCTATCGTATC ATAACAGAGGTAAGCTCAACATGTAATTAGTTGCCTCGTTTTATTATATATATTTAATGAACTCATAAATAGCCATTCTA GATCTTGTTTATGACTTTCTTTTACTTTAACATATTTCCAGAGAACTGTTCTTGCAATGCCCGAAAATGGAATTGGCTTG TTCCCAGATGTAGGTTTTGCTTATATCGCGGCTCAAAGTCCAGGAGAAGGATCTGTTGGTATTTTTCTTAATATAACACA GCGTGTGTAGTTTTTATTGCTTTTATTAGACGTGCTGATAAGGATTTAAGGGTTTTTAAAGTACAAACCCTTCATGTTCT TCTTTTTGTGCATTATTCTGTCATAATTTGCCTGATGAATACATGTGTGCTGCACTACTGAAGCATCTAGATGTGGTCTC AGCTCCTGTTACACAGCTTATTAATTTTCTTAAATATGGTTTGAAGGTTCTTCGACTTCTTTTCTATGGAATATCTGAAT TCCGATATATTGAAATTTTTACTGATTGCAGGTGCTTATCTTGGATTGACTGGAAAGAGGATTTCTACTCCTTCAGATGC AATATATGTTGGCCTTGGAACACATTATGTGACATCTGGAAAGTTAGGTTTATTCAAGGAGGCTCTTTTGGCAACTAACT TGTATGTCAGCTTGAACTTTTTATTCGTTATTGAGACTCTTACTCAAGATATCTCCCTTTAACCTCATCATTTTGATTGA GTTGGACCCCTGAAATGAAAATAATACATTGACTTGTTTGTGTAGACACAAGTCATTTACTTTCTGCAGCATGCATTTCA CTCATGGTCATCTTGGATGTTTGTTGAAATAATCTATCATAGTATTTACTTTGTTAAGAAGTACATAATTGCAATGAGGG CATACATAATTATCTAACAAACTCATTGATTATTCAGTTCCCAGGACCCCCATCAGGACATCAAAGTACTCTTAGCAAGA TATGAGTCCAACCCAGAGTCTGAGGCACAATTGAAATTGCTTTTACCCGAGATAATTTCTTCATTTGGAGGAAATAAATC TGTTACTAAGACTGTTGATGAGCTTAAAAAACACCAGTCAAGTGCTGACTCTAACGGTATACTTATTGATCTATTATTTA TTTACATTATTCTGAAATGTCCAGATACAGCTGTTGTTGGCTTGTTTCGTATATCAAATATTTATGCTTGAAATTGTATG TTTGAATTTGTTGTAAATTGCTTGTCTAGTCGTTGTAATTTTCTTGTATTTTTCTATTTCTAGTTGTGGAGTGGGCTAAT GAAGCTCTCCAAGGCCTTGGAAAAGGTGCTCCTTTTTCCCTTTTCTTGACCAATAAGCACTTCTCTGCAGTTGCCTCCGC AGTAGCGAAAAATGACGTTGAATTATCCACAGTAAGCACTTTTTTTGGGGGGATTGGGTGGGTTAAGGTTTCCATGTTTC AAAATTAATTCAATGTCTATTCTCTACATTTGAAATAATCCAGCTTAATGCCGTAATGAAAACTGAGTATCGGATTGCCT TGAGGTCTTCACTGCGACATGATTTTGCAGAAGGTGTCCGAGCAGTATTGGTTGACAAGGATCAGGTTTTCTCTTTTTCT CATGATTTTTATACTTTTTATCTGGTAGTCAAACTTCAATTCTAGTTTTCCCTAAACTAGGAAATGATAGATACAATTGA TATGTCTGCAGAAGGCTAGTGTATGTATTACTCTATTACTAATACTAATAGTTAATACTATCTGTTTTACCTTGGGGGGG GGGGGACTTATTGTCGGTGAAGTGAAATCATGTGAACATATGTTTCTTCTGTGTTTATACTTTATACTTATACTTCCTTT CTTCCCTAGCTTCACAAATACTTGAATCTTCCGTTGAAAGTACACGTGTCTGATTTATCTGCATATGAATCTACAGTTTA AAGTATTTAAATTTGGTTCTGTCTTCATATAGTTCCTTCTGTGTGCTATCTTTCTAGTGCTATGAATCTTTTATATGTTC TCTTTAATCCATGAAGTTATTTATCCTTCAATATTTGGTAAATTTTGTTTCCTGCTTGAGTAATAGATTCAATTACTATT CTCCTGCAGAACCCTAAGTGGAAACCATCAAGATTGGAAGAAGTTGATCCAGGTGAGGTGGAAGAAGTTCTTAAACCACT AGGACCCCAGGTTGGGGAGTTGTCTGTGTAA
CDS sequence (LotjaGi4g1v0451100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCCGAAGATGATTTCGTCAAGGGCACTGTTCATTCCAACGGCGTCGCTGTCATCACGCTCGATCGCCCCAAAGC TCTCAACGCCATGAACCTAGATATGGATGTAAAGTATAAAAGTTATCTTGATCAATGGGAATTGGACCCGAGGGTCAAAT GTGTGCTGGTTGACAGCAGCTCGCCTCGCGCCTTTTGTGCTGGTATGGATATTAAAGGGGTTGTTGCTGAAATACAAAAG GACAAAAGCGGTGATGTGAAGCAGATAATAACCAAGAACCACCTGTCAGATATGATTGAGGTCTTCACGGCTGAGTATTC TTTGATATGCAAAATTGCTGAGTACAAGAAGCCATATATAAGCTTCATGGATGGAATTACAATGGGTTTTGGAATTGGCT TATCTGGTCATGGCCGCTATCGTATCATAACAGAGAGAACTGTTCTTGCAATGCCCGAAAATGGAATTGGCTTGTTCCCA GATGTAGGTTTTGCTTATATCGCGGCTCAAAGTCCAGGAGAAGGATCTGTTGGTGCTTATCTTGGATTGACTGGAAAGAG GATTTCTACTCCTTCAGATGCAATATATGTTGGCCTTGGAACACATTATGTGACATCTGGAAAGTTAGGTTTATTCAAGG AGGCTCTTTTGGCAACTAACTTTTCCCAGGACCCCCATCAGGACATCAAAGTACTCTTAGCAAGATATGAGTCCAACCCA GAGTCTGAGGCACAATTGAAATTGCTTTTACCCGAGATAATTTCTTCATTTGGAGGAAATAAATCTGTTACTAAGACTGT TGATGAGCTTAAAAAACACCAGTCAAGTGCTGACTCTAACGTTGTGGAGTGGGCTAATGAAGCTCTCCAAGGCCTTGGAA AAGGTGCTCCTTTTTCCCTTTTCTTGACCAATAAGCACTTCTCTGCAGTTGCCTCCGCAGTAGCGAAAAATGACGTTGAA TTATCCACACTTAATGCCGTAATGAAAACTGAGTATCGGATTGCCTTGAGGTCTTCACTGCGACATGATTTTGCAGAAGG TGTCCGAGCAGTATTGGTTGACAAGGATCAGAACCCTAAGTGGAAACCATCAAGATTGGAAGAAGTTGATCCAGGTGAGG TGGAAGAAGTTCTTAAACCACTAGGACCCCAGGTTGGGGAGTTGTCTGTGTAA
Protein sequence (LotjaGi4g1v0451100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAEDDFVKGTVHSNGVAVITLDRPKALNAMNLDMDVKYKSYLDQWELDPRVKCVLVDSSSPRAFCAGMDIKGVVAEIQK DKSGDVKQIITKNHLSDMIEVFTAEYSLICKIAEYKKPYISFMDGITMGFGIGLSGHGRYRIITERTVLAMPENGIGLFP DVGFAYIAAQSPGEGSVGAYLGLTGKRISTPSDAIYVGLGTHYVTSGKLGLFKEALLATNFSQDPHQDIKVLLARYESNP ESEAQLKLLLPEIISSFGGNKSVTKTVDELKKHQSSADSNVVEWANEALQGLGKGAPFSLFLTNKHFSAVASAVAKNDVE LSTLNAVMKTEYRIALRSSLRHDFAEGVRAVLVDKDQNPKWKPSRLEEVDPGEVEEVLKPLGPQVGELSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 390 | 388 | 1.2E-210 | – | |
| PANTHER | 3 | 390 | 388 | 1.2E-210 | – | |
| SUPERFAMILY | 5 | 364 | 360 | 1.67E-47 | ||
| Gene3D | 8 | 388 | 381 | 1.1E-101 | – | |
| CDD | 15 | 209 | 195 | 3.40888E-41 | – | |
| Pfam | 18 | 377 | 360 | 1.4E-103 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 3-hydroxyisobutyryl-CoA hydrolase activity | Catalysis of the reaction: 3-hydroxy-2-methylpropanoyl-CoA + H2O = CoA + 3-hydroxy-2-methylpropanoate. |
Expression pattern of LotjaGi4g1v0451100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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