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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0451500 |
| Transcript ID | LotjaGi4g1v0451500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT1G77210.1 sugar transporter 14; Swiss-Prot: sp|Q8GW61|STP14_ARATH Sugar transport protein 14; TrEMBL-Plants: tr|A0A072TUZ6|A0A072TUZ6_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi4g1v0451500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82364173..82367021) extracted from Lotus japonicus Gifu genome v1.2.
GGAATAGCAGATGGAGGGCCAAGGAAAAGGGCTCATCTTTATACGCACAAGTTCACTCCCTATTGCGCTGTCAATTGCTT CTTTGGATCTCTTGGTGGCTTTCTTTTCGGTTATAATCTCCGTGTTTCAGGTCTGTTTTCTATGATCTCTCTCGGTTATA GATTTTTTTTCTTTTCAAAGTAATAAAATAAACCAAACCCTGTTTCTGCATTGTCTCTTTCTTTTTATTTATTCACTATC ACTGATTAATGGTTAGTATTGTATTGTTATTAGAAAATTCACCATAAGTCTTACGCATGAATGTTAATGTTATTATTCAT ATTCATGTTGCTGCACAGAAATTTACTTTACCTGGTGTGCTCATTTTTCAGATGGGGTGACTTCAAGGGATGATTTCCTC CAGGAATTCTTCCCAACAGTGTTGGAGAGGAAGAACATGCATCTGAAGGAGACTGATTATTGTAAATTTCATGATCAAGT TCTGACACTGTTTACATCATCACTTTATTTCTCAGCACTTTTCACAACATTCTTTGCATCCTACTTAACAAGAAAGAAGG GCAGAAAGGCCAGTATCATAGTGGCAGCACATGGCTTCTTGGTTGGAGCTATCCTCAGTACATGTGCAAAGAGCATTGCA ACGCTGATCATTGCTAGGATCCTTCTTGGTGTAGGCATTGGATTTGGCAACCAAGTAAGTGAATTGATGCAAAATACATA TAGATCATCATTGATATTGACATAATAATTACTTGAACCAATTAATGATAAACATGTGTATGCTTGGTTCCTCGCCTCAG AATCAATTATTTTCACCGAGTAAAATCACTTTTGGATGATATATGCATGTTTGGATATTCCGTGGAAAACCACGGTGGTG AGGCCAAAATCACGGGGAACCGTCGCAAAAAGCTAAGGAAAGTTGTTTCTGTCCTGCGTGATTTTGGCTTCGCCGTGATT TTGCACAGTGATTTGGCTTGAGAGTCTTCCTGGAGAAGAATCAATTCTTTATAGAAGCTAGAGAGAGTAGCTTTTGTGTT AGATAGAATCAGTTGTGAGATTTTACAACAGGATTTTACGGTATTTACCCTACAAAAATCACTTTTTTCATGGATGTATG ATGTATCCAAACAGAAATCACTTCACTCTCAACTCACTTTTCCCAAAATCAATTGTGATAACACATATGCATCTCGTTAC TTATTTTCTTACAGACACACCTAATTATGCAGGCTATTCCTTTGTACCTATCTGAAATGGCTCCAGCTAAAACCCGTGGA GCTGTGAACCAACTGTTTCAGTTGACAACCTGTGCTGGAATTCTAATAGCAAGCCTCATGAATTATTCCACTGAAACAAT CTACCCCGGTGGATGGAGAATATCAATGGGTTTTGCAGCTTTTCCAGCAATGATTATGCTTAAGGGAGGTATTCTTTGTG CTGAGACGCCTAACAGCCTTGTGGAACAAGGATGGTTAGAGGAAGCAAGGAGGGTATTGGAGAACGTTAGAGGAACCAAG AATGTTGATGCTGAATTTGAAGATCTTAAGGATGCAAGTGAACAAGCAAGAGCCATCACTAGTCCATTTAGGACACTCCT TCAGAGGAAGTACACGCCTCAACTAGTAATAGGTGCCTTGGGAATTCCAGCATTCCAGCAACTAACTGGGAACAATTCCA TCCTCTTCCTTGCCCCTGTCATTTTCCAGAGTCTTGGATTTGGTAACAATGCAGCTCTCTTTTTATCTTTCATTACCATT GGAGCTCTACTTGTTGCCACTGTGATCTCCATGTTTTTAGTTGACAAGTTTGGTAGAAGAAAATTCTTTATGGAAGCTGG TTTTGAAATGATATGCTGCATGGTAACTAACTACATTTTGTCCTATATAGTATATAGCATGTTTGGATCAGCTTATTTTT CATCATAAACAAGTTTGACTCCCAGAAACAAGCTTCAACCCATAATCGATTTTGACTTTAGAATTGATTTTAAGTGCATG TTTGGAAATTCTTCTACAATTGATTCTAAAGTTAGAATCAATTTAACGGTAGAATTTATTCTGATTTAAAAGTTGATCTA AACATGCTATTAGTCTCATTCAACAAATGCTATACTAACCAGTGCTTATATTGAATTGTTTATGTGACTTTATTTTTGTT GATTTGCAGATTTGTATTGCTGTGGTTTTGGCTCTGGAGTTTGGACATGGTAAAGAGCTCTCTAAAGGAGTCAGTACCTT CCTTGTTGTGGTGATTTTCTTGTTTGTGTTGGCATATGGAAGATCTTGGGGTCCCCTAGGGTGGTTGGTTCCAAGTGAGC TGTTTCCATTGGAGATAAGGTCAGCTGGACAGAGTATTGTGGTCTGTGTCAACATGATCTTCACTGCTCTTGTTGCACAA TTGTTTCTCGTGTCACTCTGTCACCTCAAATATGGGATCTTTTTGCTGTTTGGTGGCTTAATTGTGGTCATGAGTTGCTT TATCTTCTTCCTTTTGCCGGAAACAAAACAAGTTCCGATCGAGGAGATTTATCTTCTTTTTGAAGACCACTGGTTCTGGA AGAAAATTGTGAGGACAGACCAAGATCTTAAGCATCAAATGGGAAGCCAACAAACAGACCAAGATCTTGAGCATCAAATG GAATGCCAACAACTTTTTAACATTCCCAACAAGATAGATTGAACATTTTTAGTTTCTCCTTTTGTTTTTGGTCAATTGTG TATGTTTTCTTTATAGGCATTTCTTTTAAATATGGTCGGTTTAATGATTATTGACTCTATTTTCCTCAACAACGAGAACC TGTTAATACTAAAAAGACCATTTAAGCTATGTTTAAATTGATAGAAAAA
CDS sequence (LotjaGi4g1v0451500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATCTGAAGGAGACTGATTATTGTAAATTTCATGATCAAGTTCTGACACTGTTTACATCATCACTTTATTTCTCAGC ACTTTTCACAACATTCTTTGCATCCTACTTAACAAGAAAGAAGGGCAGAAAGGCCAGTATCATAGTGGCAGCACATGGCT TCTTGGTTGGAGCTATCCTCAGTACATGTGCAAAGAGCATTGCAACGCTGATCATTGCTAGGATCCTTCTTGGTGTAGGC ATTGGATTTGGCAACCAAGCTATTCCTTTGTACCTATCTGAAATGGCTCCAGCTAAAACCCGTGGAGCTGTGAACCAACT GTTTCAGTTGACAACCTGTGCTGGAATTCTAATAGCAAGCCTCATGAATTATTCCACTGAAACAATCTACCCCGGTGGAT GGAGAATATCAATGGGTTTTGCAGCTTTTCCAGCAATGATTATGCTTAAGGGAGGTATTCTTTGTGCTGAGACGCCTAAC AGCCTTGTGGAACAAGGATGGTTAGAGGAAGCAAGGAGGGTATTGGAGAACGTTAGAGGAACCAAGAATGTTGATGCTGA ATTTGAAGATCTTAAGGATGCAAGTGAACAAGCAAGAGCCATCACTAGTCCATTTAGGACACTCCTTCAGAGGAAGTACA CGCCTCAACTAGTAATAGGTGCCTTGGGAATTCCAGCATTCCAGCAACTAACTGGGAACAATTCCATCCTCTTCCTTGCC CCTGTCATTTTCCAGAGTCTTGGATTTGGTAACAATGCAGCTCTCTTTTTATCTTTCATTACCATTGGAGCTCTACTTGT TGCCACTGTGATCTCCATGTTTTTAGTTGACAAGTTTGGTAGAAGAAAATTCTTTATGGAAGCTGGTTTTGAAATGATAT GCTGCATGATTTGTATTGCTGTGGTTTTGGCTCTGGAGTTTGGACATGGTAAAGAGCTCTCTAAAGGAGTCAGTACCTTC CTTGTTGTGGTGATTTTCTTGTTTGTGTTGGCATATGGAAGATCTTGGGGTCCCCTAGGGTGGTTGGTTCCAAGTGAGCT GTTTCCATTGGAGATAAGGTCAGCTGGACAGAGTATTGTGGTCTGTGTCAACATGATCTTCACTGCTCTTGTTGCACAAT TGTTTCTCGTGTCACTCTGTCACCTCAAATATGGGATCTTTTTGCTGTTTGGTGGCTTAATTGTGGTCATGAGTTGCTTT ATCTTCTTCCTTTTGCCGGAAACAAAACAAGTTCCGATCGAGGAGATTTATCTTCTTTTTGAAGACCACTGGTTCTGGAA GAAAATTGTGAGGACAGACCAAGATCTTAAGCATCAAATGGGAAGCCAACAAACAGACCAAGATCTTGAGCATCAAATGG AATGCCAACAACTTTTTAACATTCCCAACAAGATAGATTGA
Protein sequence (LotjaGi4g1v0451500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHLKETDYCKFHDQVLTLFTSSLYFSALFTTFFASYLTRKKGRKASIIVAAHGFLVGAILSTCAKSIATLIIARILLGVG IGFGNQAIPLYLSEMAPAKTRGAVNQLFQLTTCAGILIASLMNYSTETIYPGGWRISMGFAAFPAMIMLKGGILCAETPN SLVEQGWLEEARRVLENVRGTKNVDAEFEDLKDASEQARAITSPFRTLLQRKYTPQLVIGALGIPAFQQLTGNNSILFLA PVIFQSLGFGNNAALFLSFITIGALLVATVISMFLVDKFGRRKFFMEAGFEMICCMICIAVVLALEFGHGKELSKGVSTF LVVVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSAGQSIVVCVNMIFTALVAQLFLVSLCHLKYGIFLLFGGLIVVMSCF IFFLLPETKQVPIEEIYLLFEDHWFWKKIVRTDQDLKHQMGSQQTDQDLEHQMECQQLFNIPNKID
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 409 | 409 | 39.026 | ||
| CDD | 1 | 407 | 407 | 5.28024E-158 | – | |
| Phobius | 1 | 14 | 14 | - | – | |
| Gene3D | 2 | 423 | 422 | 8.2E-101 | – | |
| PANTHER | 8 | 433 | 426 | 1.1E-250 | – | |
| PANTHER | 8 | 433 | 426 | 1.1E-250 | – | |
| Pfam | 12 | 417 | 406 | 7.7E-101 | ||
| SUPERFAMILY | 13 | 415 | 403 | 7.19E-54 | ||
| Phobius | 15 | 38 | 24 | - | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| TIGRFAM | 16 | 416 | 401 | 4.8E-93 | ||
| Phobius | 39 | 44 | 6 | - | – | |
| Phobius | 45 | 61 | 17 | - | – | |
| Phobius | 62 | 66 | 5 | - | – | |
| Phobius | 67 | 92 | 26 | - | – | |
| TMHMM | 70 | 92 | 23 | - | – | |
| PRINTS | 71 | 90 | 20 | 1.2E-22 | ||
| ProSitePatterns | 76 | 101 | 26 | - | ||
| Phobius | 93 | 103 | 11 | - | – | |
| Phobius | 104 | 124 | 21 | - | – | |
| TMHMM | 107 | 126 | 20 | - | – | |
| Phobius | 125 | 135 | 11 | - | – | |
| Phobius | 136 | 156 | 21 | - | – | |
| Phobius | 157 | 252 | 96 | - | – | |
| PRINTS | 228 | 238 | 11 | 1.2E-22 | ||
| Phobius | 253 | 276 | 24 | - | – | |
| TMHMM | 253 | 275 | 23 | - | – | |
| ProSitePatterns | 272 | 289 | 18 | - | ||
| Phobius | 277 | 287 | 11 | - | – | |
| TMHMM | 285 | 307 | 23 | - | – | |
| Phobius | 288 | 305 | 18 | - | – | |
| Phobius | 306 | 316 | 11 | - | – | |
| Phobius | 317 | 335 | 19 | - | – | |
| TMHMM | 320 | 342 | 23 | - | – | |
| PRINTS | 322 | 343 | 22 | 1.2E-22 | ||
| Phobius | 336 | 354 | 19 | - | – | |
| PRINTS | 345 | 357 | 13 | 1.2E-22 | ||
| Phobius | 355 | 377 | 23 | - | – | |
| TMHMM | 357 | 379 | 23 | - | – | |
| Phobius | 378 | 383 | 6 | - | – | |
| Phobius | 384 | 405 | 22 | - | – | |
| TMHMM | 384 | 406 | 23 | - | – | |
| Phobius | 406 | 466 | 61 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0451500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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