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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0461500 |
| Transcript ID | LotjaGi4g1v0461500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT5G52450.1 MATE efflux family protein; Swiss-Prot: sp|Q9FHB6|DTX16_ARATH Protein DETOXIFICATION 16; TrEMBL-Plants: tr|A0A151T335|A0A151T335_CAJCA Protein TRANSPARENT TESTA 12; Found in the gene: LotjaGi4g1v0461500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83198276..83202203) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAATTCATCTAGACAACATCATGTAACATTTTGACAATGACAGAATCTTAATCTAGTGCTAAATATATTCCTTACTA AGGTAATGCCAAGAACACAGTTTCAGAGCAGCCCTATTATTTAAAACTTCTGATTCAGTGTGTAAAATTAGAACACTGCA GACATGGATCAAAGAGTAGATCAAACAGGACCTCTACGGTCTCCCTTGATTCAAATCTTGGGGCAAGATGGAATAAGAGT CGATAATGATAGCAAGAAGAGTATAGTAGAACTAGAAAGAAGAGATGTTTTTGAAGAAGTTAAGAAGCAGTTATGGCTGG CAGGGCCTTTGGTATCAGCAGGTCTGCTGAACTTTTGCATACAGATCATATCTGTTATGTTTGTGGGCCATCTAGGTGAG CTGCCTCTGGCTGGTGCTTCAATGGCCACTTCTTTTGCTTCTGTCACTGGTATTAGCTTGTTGGTGAGTGTTTTTGTTGT GCTTCCCTATTGCTTTTATCTTTGGATCTCTAAATTCCCTTGTATCAAGTTAGATTCTTTGTTTTATGTTGTTGGTTAGA TGAGAAATGGAAATTTTATGGTGTTTAGTAATTTATTTGCAATGAAGCTTAAAATAGTTTCTGATGTATTAACTTAGTGC GTGTTCAGATACTGGTATTGTAATGTGAATAGACTTCTAACTCAATCTGTAATAAGAGTTTCTAAGATGGATTAACTTAG TGTGTGTTCAGATACTGGTTGATTGTAATGTGAATAGACTTCTAACTCAATCTGTAATAAGAGTTTCTAACACTTTTTGT TTTGAAGTGCGTGTAAAAGAGATATCCAAACACACCCTTATGGAGCAAAAGAGTGTAAGGTATCAGAGGCAATATGAAGA AGAAGATAACATAATCAAGAGAGAGAGTTCTGTGAGAACTTGTGATTTTTGAAATGACCAGAAGATCATTATTAAACTGC GGAGTTTCAACTTGCAAGTCATTATTTATGACAAGAGGATGCAAACTATATTTGAACAAATAGACTTTTAAAAAACTCAA ATGAATAACAGAAATGTCTAACTAATTCTGACAGAATAAACTGACTAACTAACTTTAGTTTCTCTACAATCAGAACCTTT CTAGTTTTTAACTTCCATGCCATAATATGACTGAGTCAATATAATTAGTTCAAAATAAAGTTGTTGACCATTGCCAACAT TATAGTAAACTGTTGTATGTTATAAGCTGTTAGATATGAGACTTTTCTATCTATAAATACCTCATTAGGAATGATAGCCT AGTAGTTATAATGACTTAATAGCTAATAATGAATTTGCTTTATGTATTGGTAAAGGTAAACATTATTTGCTTAGTAGCTT ATTACTTTTGCTCTGCAAGACCTTTTCATATAGTCTATCATTTATGTACAAAAGCTTGTAAGCTATCAATGAAATACTCG TAACAATTTATACTTTATACATAAGCTTGTAATTTTCTCTCTTCACTTGTAAGTCTGCTACCCGCGTGCGTTTACTCACT TTTCTTAACACAAACTTATTGTTGGTTTTTTATTAGGACAGCTGGGAATGGCCAGTGCCTTGGATACCTTTTGTGGGCAG TCATATGGAGCAAAGCAGCACAGAATGTTAGGCATACACATGCAAAGGGCCATGCTCACTCTTGTGATTGTCAGCATACC CTTAGCAATCATTTGGGCAAACACAAGGTCCATTCTGGTTTTCTTTGGCCAAGATCCTGAAATATCTGCAGAAGCAGGGA AATATGCTCAGTTAATGGTTCCAAGCCTTTTTGCCTATGGTCTTCTTCAATGTCTAAACAGATTCTTACAAACACAAAAT ATTGTATTGCCAACTATGTTCAGCTCTGGAGTTACTACTTTGCTACATCTTGTTGTGTGTTGGATTTTGGTATTCAAATG CGGTTTAGGGAGTAGAGGAGCTGCCATAGCAAATTCTATATCTTATTCGGTGAATGTTTTGATACTATCACTCTATGTCA AGTTTTCTCCTTTGTGTGCAAAAACTTGGACAGGGTTTTCAAAAGAGGCACTGCATAACATTCCCTCTTTTCTGAGACTG GCCATTCCTTCAGCTATTATGGTTTGGTATTCCCATTCTCTAATATTTCAAGAGTAGCTAGTATAAATGACCATGATTTA CTCGGATTCAGATTCTCTCCGGCCTCTCCTGTCTCTCCGGCCAACAGATCATCATAAACTCTTTTATTTGATAAGGCTAT TTTCAATTTAGATTAATCTTAACCACTGATTGCGAGAATCAATGGCTATGATTATGCAGGAGAGACATTGAGATGCTGCA GTGGATCCAAACACGATTTACACTATGAATTCAGTTTGAGATCCTAATGATGTTTGAAATTTTTGTCTCCAACTTTGCTG AACAGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTATCTGGTCTTCTACCAAATCCAAAGTTGGAAACATCAGT GCTTTCTATCTGGTTAGTTTCATATTTGAGATATTTTTCAAAATTCTTATATCAGCTAGGAGGTACCAAACACACTTAAC TTTAAGTATCATTATTTTGACCAATACAATATGGTTTTCTCAGCTTGAATACAGCAGAAACTGTTTGGATGATCCCCTTC GGTTTCAGTGCAGCTGTGAGGTAAGTAGTGCTTATCATATTTTAGAATTCTGCAGCAATCTTTCTGTTTTCTGACTAAGT GTGTGTTTGCTTCCACTTTTAGTAACCTTAGAGTCAACTCTCATTGACCATAATCACTTTTAGGTGGTTATATAGATGTT TGGCAATCGATATGTCAAAATCAATTCTGTGAGAAGTTGGAGAGATTAGCTTCTGTGTGGATACAATCAATTGTGAAATT TCATAACTCAATTTCACAACACTACTCTAGAGAAATAATTTTTCTCATAAATGTATTATAACATAAACTAATTCAATTTC AACTCACTTTTACCCTAATTAATTTTACTAGAATAAACTTTATCTAAAATCAATTCTCACAACGCTAATAATTTACCTGC TTGATTCTTTGCAGCACTCGCATATCAAATGAACTAGGAGGTGGTCATCCTTTGGCTGCAAATTTAGCAGTGTATATTGT GTTAGTATTGGCCCTCATCGAGGGAAGCTTGGTTGGAACTGTGATGATACTAATGCGCTATATTTGGGCCTACGCCTATA GTAATGAAGCAGAAGTGGTCGAATATGTAGCAATCATGTTGCCAATTCTTGCAGTATCCAACTTCTTGGATGGATTTCAG TGTGTACTTTCAGGTTTTTTCTTCTTTCTTCTTTTTTCTCATCTTGAATTTATGAAATAGCTACATGTTTTGAAGTAATC TTCAACTGGTTAAATCTAATTTATGCAGGCACAGTTAGAGGATGTGGTCGGCAGAAAATTGGTGCATTCATCAATTTAGG CTCTTATTATCTAGTTGGGATTCCATCAGCTATCCTGCTAGCTTTTGTATTGAATATTGGAGGGAAGGTAAAAGAAGTCT ATCATTTGAAGCATAGCAACATGACATGCACTAGTAATTGTATTGAAACAATTATCTCAAAACTCAATGCACATGTTCAA CTTTCATGTGTTAAAATTCAACTTTAATTTTTATTAGAATAATGAATTACGCGTAGATCAAACTTCAGACTACTTGGTGA CAAATACTCTTATACTATATCATGTACTATCTGAAAAGTTTAAAATGTTTAGCAAAGATAAATAAATGATTTTATATTAT ATTTCAAACCTTGTCATTTTCACAAAGTTTGCAACAATTTGAATTGTTTTTATCTGCTAAAAATAATTATACAGGGGCTC TGGCTGGGGATCATTTGTGCACTCATTGTTCAAGTATTATCTCTATTGATCATCACCTTACGTACTGATTGGGAGCAAGA GGTGAATT
CDS sequence (LotjaGi4g1v0461500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAGTGCCTTGGATACCTTTTGTGGGCAGTCATATGGAGCAAAGCAGCACAGAATGTTAGGCATACACATGCAAAG GGCCATGCTCACTCTTGTGATTGTCAGCATACCCTTAGCAATCATTTGGGCAAACACAAGGTCCATTCTGGTTTTCTTTG GCCAAGATCCTGAAATATCTGCAGAAGCAGGGAAATATGCTCAGTTAATGGTTCCAAGCCTTTTTGCCTATGGTCTTCTT CAATGTCTAAACAGATTCTTACAAACACAAAATATTGTATTGCCAACTATGTTCAGCTCTGGAGTTACTACTTTGCTACA TCTTGTTGTGTGTTGGATTTTGGTATTCAAATGCGGTTTAGGGAGTAGAGGAGCTGCCATAGCAAATTCTATATCTTATT CGGTGAATGTTTTGATACTATCACTCTATGTCAAGTTTTCTCCTTTGTGTGCAAAAACTTGGACAGGGTTTTCAAAAGAG GCACTGCATAACATTCCCTCTTTTCTGAGACTGGCCATTCCTTCAGCTATTATGGTTTGGTATTCCCATTCTCTAATATT TCAAGAGTAG
Protein sequence (LotjaGi4g1v0461500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASALDTFCGQSYGAKQHRMLGIHMQRAMLTLVIVSIPLAIIWANTRSILVFFGQDPEISAEAGKYAQLMVPSLFAYGLL QCLNRFLQTQNIVLPTMFSSGVTTLLHLVVCWILVFKCGLGSRGAAIANSISYSVNVLILSLYVKFSPLCAKTWTGFSKE ALHNIPSFLRLAIPSAIMVWYSHSLIFQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 113 | 113 | 6.5E-28 | ||
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 1 | 182 | 182 | 2.0E-90 | – | |
| PANTHER | 1 | 182 | 182 | 2.0E-90 | – | |
| Phobius | 28 | 46 | 19 | - | – | |
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 47 | 65 | 19 | - | – | |
| Phobius | 66 | 83 | 18 | - | – | |
| TMHMM | 66 | 87 | 22 | - | – | |
| Phobius | 84 | 91 | 8 | - | – | |
| Phobius | 92 | 115 | 24 | - | – | |
| TMHMM | 94 | 116 | 23 | - | – | |
| Phobius | 116 | 126 | 11 | - | – | |
| TMHMM | 126 | 144 | 19 | - | – | |
| Phobius | 127 | 146 | 20 | - | – | |
| Phobius | 147 | 166 | 20 | - | – | |
| Phobius | 167 | 187 | 21 | - | – | |
| Phobius | 188 | 189 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0461500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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