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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0465700 |
| Transcript ID | LotjaGi4g1v0465700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | AT-rich interactive domain-containing protein 1A; TAIR: AT1G73470.1 hypothetical protein; Swiss-Prot: sp|Q1LZA1|CAH1_BOVIN Carbonic anhydrase 1; TrEMBL-Plants: tr|C6TKL7|C6TKL7_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0465700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83626777..83631923) extracted from Lotus japonicus Gifu genome v1.2.
GTTAGAGACAAAAATATATTTATCCTATCAGTCATTTCTCAATTTTTTCTTTTCAAATCGTGGATTCAGGTTGAAAACAT TATTCCATGAATCTATGGCTTCAATAGAACTCCAATTGTATAATTTTGATTAGTGATTGGGGGTAAACAATATTGAAAAA ATATGCGATAATATATTTGGAGCAGAAACGACATGGTTATGGATTTTGCATTGGTTATGTGTGGGTGGTGAGGATTGGTG AAAGCTGAGCCCTAGAAGAAGAAGAAGTGTACATGGAAGAAAGGTAGAAATTGGTTGAAAAGATGAGGTGGTGTGGGATT GCAAGTGTGCCGTTAGGTTTGGGGTGCTGCTGGAGATGGAAAGTGTTTGAGTGCTACCCAGTAAGCGTAAGCTTCTTCTT ATCTCTGATATTTCATTCTGATTCTATTGGCATTCATTAAGATTAGAGATTAGAACGATCTGTCTTGTTAATTTACTCAA TGTAGTTGTGCTGAGCTGAGAGAGAGTTCCCTTACCCTGTCCTCATTCCTCAACCCAATTCTTTTCTTTTTTTTTCTGAA ACGCTAAAGGAATTGGTTCCGCCTAAGCGCAATTGGAATGGTAAGGTCTTTTGTCAGAAAAGGCCAAATGCAGACGGAAA TTCTCGTTGTGATCCGGAGCTGCGGTCGGTGCTTGAACTTGCGACCGAGTCGGAGTTGTATGAGATTGAAAGAATCCTTT TCGGTCCCAGGTGAATTGAGTTTCTATGGTGTATTGTTCTATTCATTTATGTATAATCATAATCATAATCATCATGTAAT TAGTTTTAGTACTATTACTATTTTATACAAATACATTTTGTATCAGCTATTTGAGTCCTTTGCTGAAATCCATGACATTC ACAACCACAAATACCCCGGAGGACCTCGATCGGTCCATGATTGGACTCGACCTTCAACTACGCCAACAATTTATAGCGGC CCTCGAGTCCCGCTTTTTCTTTCTTGCCGCTGATGCCCGCTCTACATTGAGGTTTTTGTTTGATTATAATTATAATCCTA TATTATTACTTTCACCATCATACTCCACATATATATATATATAATATTCTTTCGCAGGGGTTGGAGACCATCTTATAGAA ATGTCTTACTTCACCTGAGGAAAAAATTGAACATTCCTTGCTCAACTCAATTGTCAACTCAGGACCTTGAGCTTGAAATT TTTCTCCACCTTTTGCACTACAACTCAACGTGAGTGTTAGTAAAACCCTTTATTGTTATTTTCAAACGAAAAGAAAGTGA AATATTTTGTAGTTCTCTAGTCATCATCGAAAGCTTGAATATTCGTGTAGTGAAGAATCAGGAAACTATCCAGGCTTGTC GGATGTATGCACTGCATTAGACTGTCAGGGCAGTCTACAACATGGACTCAGTCAGTGGAAAATGCAGTCAAAAGTTGGCG TAGAAGACCTTCGATCAATTTTTTTGAAGGTTTTTTTACTTCAATTATTCAATTTACAAGTGACTGTTTTATTTGATCAT AAATGTTAGGTGATAAGTTTTTTCCATTTTGTTCATCTTGTTTTTTTAAGGGAGGTGGCATATTTACATTGGCAAAGATA TATCAACTGGTAAGAGAATTATGTCTCCTTTATTTATTCTTTATCTTCAATGTATCTCCAAGAGAAAGCATTTTAGTCTT TTTTACCCTTTTTCATGACCGGATGCTGACTTGCAGTTAGCTAGGAAATTATCTGGGAAAGTGCTGGTAGAAGCTGCTAA TTACCAGGTTAAGAAAGAGATAATGAAGAAGGTATACATGGGTACTGCTGGCTGTTTTGGTAGCATGGGTAATATTTCTC AAGAATAAACTTAAGCATACATTTGCTCCTTGTGATTTCCAGGGTGGACAGTTGGCTATGATCAATCTAGAATCCAGAAC AGCCTTGCTTGCAGCAAAACAGGTGCCAGATAAGACAATTTATATGCTTCTATTGTTATGAAATTCTTTTATAGGATGTA TTCTTGTGGTACTAAATTTCTAAATTATCTCCAGGTTGATAGATAGAATTGACTTTTTGAAGCCTAAATGTGTTATGTTG TAACCAATGTTTTGCACCAGTTACTTAAATGGCGAAATATGAAATATGGTTAAATTTCGACTCTCTCATTGTGGAACCTC ATAAATTGTCAGTTAATAAAAGACTTTTACCGCATTTGAGGAGCTAAAGTACTTTGTAGTAAAAAATTTGAGCACCAATT CGTTTTTAATGTTACTACCTGAATTCCATAACTTATCTTAAGAATTAGTTATTTTCTTTGTCTCTTTCTTCTGTCTGTGT GTGTGTGTATTTTCAAAAGTAAATTGGTGTTTCAGTTTATGTTGATTATATAGTATGATTCTTATCTGAAGTTTGATTTA TTTTAGGGTTTCCTTGGTGCTGCATCAAGATATCTGGGTTTTAGAAGCATGATTACATTACTTGGACCTGTGTATGTCCT ACTCCTCACCTTGTTTTCTGACTTCAATTTATAGCAGCTTTTGTATTTTTGTTACACTAACATGCTTTTCATTTATATGA ATTACAAAATAATATCACTAGGTTGAATCATGTATAATGACAAACCATACAAATCTAAAGCTTGTTTAATGGTTTGACCT ACAAATTTTATTTACTCACTGATAGAAAATAATCGGAGACATATTTACATATCAATAGCAATCTCAGCTTGAGTGCGTAT TCATATTTTATATAGAAGAATTTTTAAGTATTTTTTTGTTGACCGTATGAATCATCTGTTCACTTTCCATAGTACAAAGT GCAGCATTTTCTTGGTGATTTGCTGTCGTAGTATTTTAGTTGAGATTTGGGGAAGGACCGATCTACATCAAAGGTTCTTT TTACGAGAATGTGCATGAAGGAAACTGTGTTTCCTCAAAAAGAAAAAACTATTGGGCATTTCAATTCTTTTGTAAGGACA ACTGTCTCACCCACGCCTTGCTCTGTTAGTAACATGTAAGTTATTGTTCTTTGTCTAGTTAGTTTTGCGATCGGTAAGTT AATATGAAGCACCGATTCTGACACAACACTGCGATAAGACATGACATCCGGACACAGCTAACCTCCAAAAAGTAGGACAC CAGAACACCGCGCGCGCATGCACACACACACACATATATATAAACCCACATTCTCAAAGTCAAGACAAGTTAGATTCTTT ACAAAGACAACATAAAAACAATTTCCTAAGCTCTGTGAGCTTCACAAAAAAAAATACTAAGAGAAATTTACAGAGTAACC ACTTTGTCTAAACAAAAATGAGCTAATCTCATTGGTGAAAAGTATAACCTTTAGCTCCGTTTCGTCAAGTGACAAATTAG CAATTTCTTTCATGGTGTAACTTTTAAGAAATAGTTTTTGAAAGATATAAGTGTGTGTCCAGCCAATAAGAGGTGTCGAC TCGAGTGTCCGAGCTGAAAAAAATATTATTTTATTCGGACACCGCGAAGAAGTGTCTGACACGTGTCATGAGTGTCGGTG TCCGACACCGGGACACTCCATGTCTCAAAGGTGTCCGTGCTTCATAGAATTCACTAGAACCATGGTTGAACGTAGAAAGG AGCCTCGTAGAGAAGTCCTAGTGTGAAATATGGCATTTCTTTTATGTAATTTGGTGCACTTTATTTTGTCATGCTACTTA ACATGGAGTCTGAATATTTCACTTGGTTTAAAAGAAAATGGAAGCTTTGAAAAGTGGTCATGGTTTCTTGTGTGGAACTG AAATAACTTTGTCCGGCTCTTCATTTATTATTCTCAGGTGTTCTTGTGCAATCTCTGAATTTTCTGCATTTTACCTTAAA AGTTTTCTTGTGGGGCTTGGGACTGAGAATGAAACATACAGGCAAATAGTTTCTGACACTTCTCCTTTAGTCCTTTTTAA GTGTCAAAATAATCTAGTGCAAGTTTTTCCAATTTTTCTTGCATCTTTAAGCTTTGCTTTTATTTCTCACCTTGTCCAAT TGAGCCATTTTTTAATTGTGATTTGTGGCTAGTATCAACAGTCATTAGACAGATTTCTGTTATGCCATTCAGTAAGTTCG GTTAACTGGATCTTGTCTGGTACAGTTCACCATTAAGACTTGTCAGCAGCATATCTATTTCCTCTTTGCTTTCACAGTTT GGTACTGTTGAGGTACTATAAGTTACTATTTCTGATCATTTTATTTGAATGCGAAACAGGCTTTGGGGGACATTTTTGGC TGATCTTGTCATTCAAATGCTTGGAACAGATTATTCTAGAATCTTGCGAACAATTTATGCTTTGGCTCAGGCAATATATA TACTCTGTTCTTCCATTTTACACTTGTAGCATTGCCATCCTTGGTTTACCCGCACACCCAACTTGATATGATTTGCTTTA TGTTGTGCTTATTTGGTATTTATACTGCACTTGTGGTCTCCGATCTACTATTTTTTCTTGTTTAATTGTTGGCCTTTGGG GGCAAAAGATGATATTGGCATATAACTATTTGCTCCTTTTTACAATCACATGGTTATTTTACCTATCATAGAATCATGTC CATAAATGTCCTGTTTCTGGAGGAAATTTCAATTTTGTTGTCGTGCACCATTTGAATATCAATCTTAATATACTGAGATA TTATCAGAATTATTATTGCTATGAAACATTACTAGCTAGTTTTCTTACTTCCACCTTTTTGTGTTTGCTTCAGATTCGAG CCATCCGCACGTATAGGCTGCCATCTGATGTTACTGATGAATAGCTAAGTAGGTTCATTTCACTGATTTGGTGGCTATGT TGGAATTTGGGCATCGTGGAAGTGGAGAATATAATAAATATCAAAACAAGACAAGCAGCACTTTTAAAATTTGTAAATAT CTATATATTGGTATTTAGTGCTGAGCTAGGTCCTTCCATTGAAGATTTATTTATAGGCTGGGGTTTGGCTTGAAAGAGTC ACTATAAGGTAAAGTATCACCACAATCTTTAATTGAGATATTAATTGTTGGAATTGTGATCAAGTGCTTATACAATACTC TCTTCGTTCCTATATATAAGTCTATTTTACCTAATTCTCTTAGATTAAGAAAAGTAGTTACAAGCAATAAATTTGTAAAA GAATTTATTCACTTTCCTAGACTACCC
CDS sequence (LotjaGi4g1v0465700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGTGGTGTGGGATTGCAAGTGTGCCGTTAGGTTTGGGGTGCTGCTGGAGATGGAAAGTGTTTGAGTGCTACCCAGT AAGCGAATTGGTTCCGCCTAAGCGCAATTGGAATGGTAAGGTCTTTTGTCAGAAAAGGCCAAATGCAGACGGAAATTCTC GTTGTGATCCGGAGCTGCGGTCGGTGCTTGAACTTGCGACCGAGTCGGAGTTGTATGAGATTGAAAGAATCCTTTTCGGT CCCAGCTATTTGAGTCCTTTGCTGAAATCCATGACATTCACAACCACAAATACCCCGGAGGACCTCGATCGGTCCATGAT TGGACTCGACCTTCAACTACGCCAACAATTTATAGCGGCCCTCGAGTCCCGCTTTTTCTTTCTTGCCGCTGATGCCCGCT CTACATTGAGGGGTTGGAGACCATCTTATAGAAATGTCTTACTTCACCTGAGGAAAAAATTGAACATTCCTTGCTCAACT CAATTGTCAACTCAGGACCTTGAGCTTGAAATTTTTCTCCACCTTTTGCACTACAACTCAACTGAAGAATCAGGAAACTA TCCAGGCTTGTCGGATGTATGCACTGCATTAGACTGTCAGGGCAGTCTACAACATGGACTCAGTCAGTGGAAAATGCAGT CAAAAGTTGGCGTAGAAGACCTTCGATCAATTTTTTTGAAGGGAGGTGGCATATTTACATTGGCAAAGATATATCAACTG TTAGCTAGGAAATTATCTGGGAAAGTGCTGGTAGAAGCTGCTAATTACCAGGTTAAGAAAGAGATAATGAAGAAGGGTGG ACAGTTGGCTATGATCAATCTAGAATCCAGAACAGCCTTGCTTGCAGCAAAACAGGGTTTCCTTGGTGCTGCATCAAGAT ATCTGGGTTTTAGAAGCATGATTACATTACTTGGACCTGTGCTTTGGGGGACATTTTTGGCTGATCTTGTCATTCAAATG CTTGGAACAGATTATTCTAGAATCTTGCGAACAATTTATGCTTTGGCTCAGATTCGAGCCATCCGCACGTATAGGCTGCC ATCTGATGTTACTGATGAATAG
Protein sequence (LotjaGi4g1v0465700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRWCGIASVPLGLGCCWRWKVFECYPVSELVPPKRNWNGKVFCQKRPNADGNSRCDPELRSVLELATESELYEIERILFG PSYLSPLLKSMTFTTTNTPEDLDRSMIGLDLQLRQQFIAALESRFFFLAADARSTLRGWRPSYRNVLLHLRKKLNIPCST QLSTQDLELEIFLHLLHYNSTEESGNYPGLSDVCTALDCQGSLQHGLSQWKMQSKVGVEDLRSIFLKGGGIFTLAKIYQL LARKLSGKVLVEAANYQVKKEIMKKGGQLAMINLESRTALLAAKQGFLGAASRYLGFRSMITLLGPVLWGTFLADLVIQM LGTDYSRILRTIYALAQIRAIRTYRLPSDVTDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 15 | 15 | 5.0 | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 3 | 13 | 11 | - | – | |
| Phobius | 14 | 18 | 5 | - | – | |
| Phobius | 19 | 353 | 335 | - | – | |
| PANTHER | 45 | 349 | 305 | 1.5E-148 | – | |
| PANTHER | 45 | 349 | 305 | 1.5E-148 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0465700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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