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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0465700 |
| Transcript ID | LotjaGi4g1v0465700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | AT-rich interactive domain-containing protein 1A; TAIR: AT1G73470.3 hypothetical protein; Swiss-Prot: sp|Q1LZA1|CAH1_BOVIN Carbonic anhydrase 1; TrEMBL-Plants: tr|A0A151TK42|A0A151TK42_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0465700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83626803..83632031) extracted from Lotus japonicus Gifu genome v1.2.
ATCAGTCATTTCTCAATTTTTTCTTTTCAAATCGTGGATTCAGGTTGAAAACATTATTCCATGAATCTATGGCTTCAATA GAACTCCAATTGTATAATTTTGATTAGTGATTGGGGGTAAACAATATTGAAAAAATATGCGATAATATATTTGGAGCAGA AACGACATGGTTATGGATTTTGCATTGGTTATGTGTGGGTGGTGAGGATTGGTGAAAGCTGAGCCCTAGAAGAAGAAGAA GTGTACATGGAAGAAAGGTAGAAATTGGTTGAAAAGATGAGGTGGTGTGGGATTGCAAGTGTGCCGTTAGGTTTGGGGTG CTGCTGGAGATGGAAAGTGTTTGAGTGCTACCCAGTAAGCGTAAGCTTCTTCTTATCTCTGATATTTCATTCTGATTCTA TTGGCATTCATTAAGATTAGAGATTAGAACGATCTGTCTTGTTAATTTACTCAATGTAGTTGTGCTGAGCTGAGAGAGAG TTCCCTTACCCTGTCCTCATTCCTCAACCCAATTCTTTTCTTTTTTTTTCTGAAACGCTAAAGGAATTGGTTCCGCCTAA GCGCAATTGGAATGGTAAGGTCTTTTGTCAGAAAAGGCCAAATGCAGACGGAAATTCTCGTTGTGATCCGGAGCTGCGGT CGGTGCTTGAACTTGCGACCGAGTCGGAGTTGTATGAGATTGAAAGAATCCTTTTCGGTCCCAGGTGAATTGAGTTTCTA TGGTGTATTGTTCTATTCATTTATGTATAATCATAATCATAATCATCATGTAATTAGTTTTAGTACTATTACTATTTTAT ACAAATACATTTTGTATCAGCTATTTGAGTCCTTTGCTGAAATCCATGACATTCACAACCACAAATACCCCGGAGGACCT CGATCGGTCCATGATTGGACTCGACCTTCAACTACGCCAACAATTTATAGCGGCCCTCGAGTCCCGCTTTTTCTTTCTTG CCGCTGATGCCCGCTCTACATTGAGGTTTTTGTTTGATTATAATTATAATCCTATATTATTACTTTCACCATCATACTCC ACATATATATATATATAATATTCTTTCGCAGGGGTTGGAGACCATCTTATAGAAATGTCTTACTTCACCTGAGGAAAAAA TTGAACATTCCTTGCTCAACTCAATTGTCAACTCAGGACCTTGAGCTTGAAATTTTTCTCCACCTTTTGCACTACAACTC AACGTGAGTGTTAGTAAAACCCTTTATTGTTATTTTCAAACGAAAAGAAAGTGAAATATTTTGTAGTTCTCTAGTCATCA TCGAAAGCTTGAATATTCGTGTAGTGAAGAATCAGGAAACTATCCAGGCTTGTCGGATGTATGCACTGCATTAGACTGTC AGGGCAGTCTACAACATGGACTCAGTCAGTGGAAAATGCAGTCAAAAGTTGGCGTAGAAGACCTTCGATCAATTTTTTTG AAGGTTTTTTTACTTCAATTATTCAATTTACAAGTGACTGTTTTATTTGATCATAAATGTTAGGTGATAAGTTTTTTCCA TTTTGTTCATCTTGTTTTTTTAAGGGAGGTGGCATATTTACATTGGCAAAGATATATCAACTGGTAAGAGAATTATGTCT CCTTTATTTATTCTTTATCTTCAATGTATCTCCAAGAGAAAGCATTTTAGTCTTTTTTACCCTTTTTCATGACCGGATGC TGACTTGCAGTTAGCTAGGAAATTATCTGGGAAAGTGCTGGTAGAAGCTGCTAATTACCAGGTTAAGAAAGAGATAATGA AGAAGGTATACATGGGTACTGCTGGCTGTTTTGGTAGCATGGGTAATATTTCTCAAGAATAAACTTAAGCATACATTTGC TCCTTGTGATTTCCAGGGTGGACAGTTGGCTATGATCAATCTAGAATCCAGAACAGCCTTGCTTGCAGCAAAACAGGTGC CAGATAAGACAATTTATATGCTTCTATTGTTATGAAATTCTTTTATAGGATGTATTCTTGTGGTACTAAATTTCTAAATT ATCTCCAGGTTGATAGATAGAATTGACTTTTTGAAGCCTAAATGTGTTATGTTGTAACCAATGTTTTGCACCAGTTACTT AAATGGCGAAATATGAAATATGGTTAAATTTCGACTCTCTCATTGTGGAACCTCATAAATTGTCAGTTAATAAAAGACTT TTACCGCATTTGAGGAGCTAAAGTACTTTGTAGTAAAAAATTTGAGCACCAATTCGTTTTTAATGTTACTACCTGAATTC CATAACTTATCTTAAGAATTAGTTATTTTCTTTGTCTCTTTCTTCTGTCTGTGTGTGTGTGTATTTTCAAAAGTAAATTG GTGTTTCAGTTTATGTTGATTATATAGTATGATTCTTATCTGAAGTTTGATTTATTTTAGGGTTTCCTTGGTGCTGCATC AAGATATCTGGGTTTTAGAAGCATGATTACATTACTTGGACCTGTGTATGTCCTACTCCTCACCTTGTTTTCTGACTTCA ATTTATAGCAGCTTTTGTATTTTTGTTACACTAACATGCTTTTCATTTATATGAATTACAAAATAATATCACTAGGTTGA ATCATGTATAATGACAAACCATACAAATCTAAAGCTTGTTTAATGGTTTGACCTACAAATTTTATTTACTCACTGATAGA AAATAATCGGAGACATATTTACATATCAATAGCAATCTCAGCTTGAGTGCGTATTCATATTTTATATAGAAGAATTTTTA AGTATTTTTTTGTTGACCGTATGAATCATCTGTTCACTTTCCATAGTACAAAGTGCAGCATTTTCTTGGTGATTTGCTGT CGTAGTATTTTAGTTGAGATTTGGGGAAGGACCGATCTACATCAAAGGTTCTTTTTACGAGAATGTGCATGAAGGAAACT GTGTTTCCTCAAAAAGAAAAAACTATTGGGCATTTCAATTCTTTTGTAAGGACAACTGTCTCACCCACGCCTTGCTCTGT TAGTAACATGTAAGTTATTGTTCTTTGTCTAGTTAGTTTTGCGATCGGTAAGTTAATATGAAGCACCGATTCTGACACAA CACTGCGATAAGACATGACATCCGGACACAGCTAACCTCCAAAAAGTAGGACACCAGAACACCGCGCGCGCATGCACACA CACACACATATATATAAACCCACATTCTCAAAGTCAAGACAAGTTAGATTCTTTACAAAGACAACATAAAAACAATTTCC TAAGCTCTGTGAGCTTCACAAAAAAAAATACTAAGAGAAATTTACAGAGTAACCACTTTGTCTAAACAAAAATGAGCTAA TCTCATTGGTGAAAAGTATAACCTTTAGCTCCGTTTCGTCAAGTGACAAATTAGCAATTTCTTTCATGGTGTAACTTTTA AGAAATAGTTTTTGAAAGATATAAGTGTGTGTCCAGCCAATAAGAGGTGTCGACTCGAGTGTCCGAGCTGAAAAAAATAT TATTTTATTCGGACACCGCGAAGAAGTGTCTGACACGTGTCATGAGTGTCGGTGTCCGACACCGGGACACTCCATGTCTC AAAGGTGTCCGTGCTTCATAGAATTCACTAGAACCATGGTTGAACGTAGAAAGGAGCCTCGTAGAGAAGTCCTAGTGTGA AATATGGCATTTCTTTTATGTAATTTGGTGCACTTTATTTTGTCATGCTACTTAACATGGAGTCTGAATATTTCACTTGG TTTAAAAGAAAATGGAAGCTTTGAAAAGTGGTCATGGTTTCTTGTGTGGAACTGAAATAACTTTGTCCGGCTCTTCATTT ATTATTCTCAGGTGTTCTTGTGCAATCTCTGAATTTTCTGCATTTTACCTTAAAAGTTTTCTTGTGGGGCTTGGGACTGA GAATGAAACATACAGGCAAATAGTTTCTGACACTTCTCCTTTAGTCCTTTTTAAGTGTCAAAATAATCTAGTGCAAGTTT TTCCAATTTTTCTTGCATCTTTAAGCTTTGCTTTTATTTCTCACCTTGTCCAATTGAGCCATTTTTTAATTGTGATTTGT GGCTAGTATCAACAGTCATTAGACAGATTTCTGTTATGCCATTCAGTAAGTTCGGTTAACTGGATCTTGTCTGGTACAGT TCACCATTAAGACTTGTCAGCAGCATATCTATTTCCTCTTTGCTTTCACAGTTTGGTACTGTTGAGGTACTATAAGTTAC TATTTCTGATCATTTTATTTGAATGCGAAACAGGCTTTGGGGGACATTTTTGGCTGATCTTGTCATTCAAATGCTTGGAA CAGATTATTCTAGAATCTTGCGAACAATTTATGCTTTGGCTCAGGCAATATATATACTCTGTTCTTCCATTTTACACTTG TAGCATTGCCATCCTTGGTTTACCCGCACACCCAACTTGATATGATTTGCTTTATGTTGTGCTTATTTGGTATTTATACT GCACTTGTGGTCTCCGATCTACTATTTTTTCTTGTTTAATTGTTGGCCTTTGGGGGCAAAAGATGATATTGGCATATAAC TATTTGCTCCTTTTTACAATCACATGGTTATTTTACCTATCATAGAATCATGTCCATAAATGTCCTGTTTCTGGAGGAAA TTTCAATTTTGTTGTCGTGCACCATTTGAATATCAATCTTAATATACTGAGATATTATCAGAATTATTATTGCTATGAAA CATTACTAGCTAGTTTTCTTACTTCCACCTTTTTGTGTTTGCTTCAGATTCGAGCCATCCGCACGTATAGGCTGCCATCT GATGTTACTGATGAATAGCTAAGTAGGTTCATTTCACTGATTTGGTGGCTATGTTGGAATTTGGGCATCGTGGAAGTGGA GAATATAATAAATATCAAAACAAGACAAGCAGCACTTTTAAAATTTGTAAATATCTATATATTGGTATTTAGTGCTGAGC TAGGTCCTTCCATTGAAGATTTATTTATAGGCTGGGGTTTGGCTTGAAAGAGTCACTATAAGGTAAAGTATCACCACAAT CTTTAATTGAGATATTAATTGTTGGAATTGTGATCAAGTGCTTATACAATACTCTCTTCGTTCCTATATATAAGTCTATT TTACCTAATTCTCTTAGATTAAGAAAAGTAGTTACAAGCAATAAATTTGTAAAAGAATTTATTCACTTTCCTAGACTACC CTTATTTGATTTCTTATAAATTTCTCTCTCCAAGTTATTATTTCAAAACCTCATTGTCTCTTTCATATTAAATAATATGA TGATAGTTTTGGAAAAAAATAATTAATGC
CDS sequence (LotjaGi4g1v0465700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGTGGTGTGGGATTGCAAGTGTGCCGTTAGGTTTGGGGTGCTGCTGGAGATGGAAAGTGTTTGAGTGCTACCCAGT AAGCGAATTGGTTCCGCCTAAGCGCAATTGGAATGGTAAGGTCTTTTGTCAGAAAAGGCCAAATGCAGACGGAAATTCTC GTTGTGATCCGGAGCTGCGGTCGGTGCTTGAACTTGCGACCGAGTCGGAGTTGTATGAGATTGAAAGAATCCTTTTCGGT CCCAGCTATTTGAGTCCTTTGCTGAAATCCATGACATTCACAACCACAAATACCCCGGAGGACCTCGATCGGTCCATGAT TGGACTCGACCTTCAACTACGCCAACAATTTATAGCGGCCCTCGAGTCCCGCTTTTTCTTTCTTGCCGCTGATGCCCGCT CTACATTGAGGGGTTGGAGACCATCTTATAGAAATGTCTTACTTCACCTGAGGAAAAAATTGAACATTCCTTGCTCAACT CAATTGTCAACTCAGGACCTTGAGCTTGAAATTTTTCTCCACCTTTTGCACTACAACTCAACTGAAGAATCAGGAAACTA TCCAGGCTTGTCGGATGTATGCACTGCATTAGACTGTCAGGGCAGTCTACAACATGGACTCAGTCAGTGGAAAATGCAGT CAAAAGTTGGCGTAGAAGACCTTCGATCAATTTTTTTGAAGGGAGGTGGCATATTTACATTGGCAAAGATATATCAACTG TTAGCTAGGAAATTATCTGGGAAAGTGCTGGTAGAAGCTGCTAATTACCAGGTTAAGAAAGAGATAATGAAGAAGGGTGG ACAGTTGGCTATGATCAATCTAGAATCCAGAACAGCCTTGCTTGCAGCAAAACAGGGTTTCCTTGGTGCTGCATCAAGAT ATCTGGGTTTTAGAAGCATGATTACATTACTTGGACCTGTGCTTTGGGGGACATTTTTGGCTGATCTTGTCATTCAAATG CTTGGAACAGATTATTCTAGAATCTTGCGAACAATTTATGCTTTGGCTCAGGCAATATATATACTCTGTTCTTCCATTTT ACACTTGTAG
Protein sequence (LotjaGi4g1v0465700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRWCGIASVPLGLGCCWRWKVFECYPVSELVPPKRNWNGKVFCQKRPNADGNSRCDPELRSVLELATESELYEIERILFG PSYLSPLLKSMTFTTTNTPEDLDRSMIGLDLQLRQQFIAALESRFFFLAADARSTLRGWRPSYRNVLLHLRKKLNIPCST QLSTQDLELEIFLHLLHYNSTEESGNYPGLSDVCTALDCQGSLQHGLSQWKMQSKVGVEDLRSIFLKGGGIFTLAKIYQL LARKLSGKVLVEAANYQVKKEIMKKGGQLAMINLESRTALLAAKQGFLGAASRYLGFRSMITLLGPVLWGTFLADLVIQM LGTDYSRILRTIYALAQAIYILCSSILHL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 15 | 15 | 5.0 | – | |
| Phobius | 1 | 300 | 300 | - | – | |
| PANTHER | 45 | 338 | 294 | 5.6E-144 | – | |
| PANTHER | 45 | 338 | 294 | 5.6E-144 | – | |
| TMHMM | 294 | 313 | 20 | - | – | |
| Phobius | 301 | 322 | 22 | - | – | |
| Phobius | 323 | 327 | 5 | - | – | |
| TMHMM | 328 | 347 | 20 | - | – | |
| Phobius | 328 | 347 | 20 | - | – | |
| Phobius | 348 | 349 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0465700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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