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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0000600 |
| Transcript ID | LotjaGi5g1v0000600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT1G20930.1 cyclin-dependent kinase B2;2; Swiss-Prot: sp|Q8LG64|CKB22_ARATH Cyclin-dependent kinase B2-2; TrEMBL-Plants: tr|I3T0I5|I3T0I5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0000600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:128861..131487) extracted from Lotus japonicus Gifu genome v1.2.
GTAATAATTTGAACGAACGGTGAGATGATAGGAGGGAGGGGAGCGGGATTTGAAATTCAAAAATGAAAAGGGAAGGATCC GTTGGTGTGCGACATTCCTATTCCGAAATGGTGACAACGGCTATATATTGATTGATATAGGCACAAGCAGAAGCACAAGC ACGACGATTCATTTGAATTGAGAGATTGAGAAAGAAGAGAGAGAGATGGAGAAGAGTGGAGTAGTTTTGTCGGTGAAGGA GGCATTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTATGGGAAGGTGTATAGGGCAAGAGAGAAGGCTACTGGGAAGA TCGTTGCCCTCAAGAAGACTCGCCTCCATGAAGACGAAGAAGGTGTCCCTCCCACCACTCTCCGTGAGGTTTCCATTCTG CGAATGCTCTCTCGCGATCCCCATGTTGTCAGGTACTAATCTTTCAATTCGAATTCGAATTGGGATTTTTTATAAACCCT AATTTAATTTAATTTAATCTAATCTCCACACACACACACACACACACACACACACAGGTTAATGGATGTTAAACAAGGTC AGAGTAAGGAAGGGAAGACAGTGCTGTACTTGGTCTTTGAGTACATGGATACCGATCTCAAGAAATTCATTCGCACTTTC CGTCAAACTGGACAAAATGTCCCACCCAAAACCGTCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCA TGGTCATGGAATCTTGCACAGGTAACCTAACCTAACCTAACCTAATCTCTCTTTCGAATCTTATTTTATCTATCTAATCA ACACAAGATTAAGATTGGGTCTTTCTTTCTTTATGAAGGGACTTGAAGCCTCACAATCTCTTGATGGATCGAAAAACTAA TATGCTTAAAATTGCTGATCTTGGCCTTGCTCGAGCATTCACCGTGCCAATTAAGAAGTACACGCATGAGGTATATTATA CATTCTGATTGCTAATTCATGTTTTTGGTTCATCATTCATTACCTTACTTAGTTATTGCACTTTTCTGTCTCTGGTTTCA GATACTCACCCTGTGGTACAGAGCTCCTGAAGTCCTTTTGGGAGCCACCCATTACTCAATGGCAGTGGACATGTGGTCCG TTGCCTGCATCTTTGGTAAGCATCATCATCTAACTGGATTTTCCTACATTTTCACACCTCTATCATGTCGAGTTTCTACA TCACAGAAGCTAGTACTATAGGTTGTGTTTGTATTAGATTTCAATTTAACTGGCCCTCCAAGTTGTTGTATCATCTATAT TCCAAAAACAACCAAAAATGGCACAGGTAAAAACCAAAAAGAACATTCCTGTGACAGTACACTAGTACTATAGACATTGA ATTGAATGTACTTACACTATACTAGTTCAGTTTACAGTACATTCCTGTTATTAGCCTTGATTCCCCTCCTTTTTTGCCAA AAGGATTTTCCTATGTTATTATGGGGCGGGCCGGGGGTAGTAGTATTATAATCTTAATATGTCCCTGAGAAAAGTTGCAA GAAATGCTGATGTGTGAGCACTTACTATGTTATTTGATAGAAACTACTACCTCTTATTGTGTTTAGTATTGTAACATTTA TCGCTCTCTTCTTCATCTGGAATGTAGCTGAACTTGTAACCAAGCAAGCACTCTTTGCTGGTGATTCTGAGCTGCAGCAA CTCCTTCATATATTCAGGTGGAAATCTAGCAAAATTATTGTTTATCATCACCTGCTTAGTTGCTTCATTTTGTGTATGTG TTGTTATATAGTTGGGCACTCCTTTTTTGTGCAGATTGTTGGGCACTCCTAATGAAGAGGTGTGGCCAGGGGTTAGTAAA CTAATGAACTGGCATGAGTATCCTCAGTGGAATCCTCAAAGTTTGTCAACTGCTGTTCCAAATTTGGATGAGCTTGGACT GGATCTACTATCTGTAAGTTGGCTGACCCTTAACTTACTCCTTTGATCCTTTCTATTGTAGCAATTGTTGTTGACTTTCA TCATCTCTTCATTTTCAGGAAATGTTGCACTATGAACCTTCCAAGAGGATCTCAGCAAAGAAAGCTATGGAACATTGTTA CTTTGATGACCTGGACAAGACCTATCTTTAGGATTAACAAATGATGATTTGATGAATGTAGGAATTCATGATTACCGATT TATGCTTCTCTCGAGCGCATGTCAAAGTCTGTTTTAGGAATTATGGATGATTGCCCTTCTATATAGGATTTTGATCTCTT AAAAACACTGATTGAAGTGTTTTTGTAACTGCTGTTTTTGCTGATGGACCATATATGCCTTGATGATATATTTCTAGCTG ATTTATATCAGCTTCTGTTCGATTTTCTTTGTTTGGTGGTCAAGTTGTGCCTTGATTTTAACAGAAGACAAATAAAGCCT GAGTTTTTGCAGCAAGAATTTCTGAAGCTAAGAACATGTTTGAAATTTCGTAAACTCCTCGATTTCGTAAACTCATCAAG CCTGAGTATGTGATTATGCAATAAACTCCTCAATTCGTTTTCTTTCAAACTAAGAACATGTTTGAAAATCTGAGGTAAAA TATAGTATGTGTTGTATATGTATGTATGTATGTATGTGATTGTGAGGAAGAAACTTTTGGGATACAC
CDS sequence (LotjaGi5g1v0000600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGAGTGGAGTAGTTTTGTCGGTGAAGGAGGCATTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTATGGGAA GGTGTATAGGGCAAGAGAGAAGGCTACTGGGAAGATCGTTGCCCTCAAGAAGACTCGCCTCCATGAAGACGAAGAAGGTG TCCCTCCCACCACTCTCCGTGAGGTTTCCATTCTGCGAATGCTCTCTCGCGATCCCCATGTTGTCAGGTTAATGGATGTT AAACAAGGTCAGAGTAAGGAAGGGAAGACAGTGCTGTACTTGGTCTTTGAGTACATGGATACCGATCTCAAGAAATTCAT TCGCACTTTCCGTCAAACTGGACAAAATGTCCCACCCAAAACCGTCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTG CTTTCTGCCATGGTCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGATCGAAAAACTAATATGCTT AAAATTGCTGATCTTGGCCTTGCTCGAGCATTCACCGTGCCAATTAAGAAGTACACGCATGAGATACTCACCCTGTGGTA CAGAGCTCCTGAAGTCCTTTTGGGAGCCACCCATTACTCAATGGCAGTGGACATGTGGTCCGTTGCCTGCATCTTTGCTG AACTTGTAACCAAGCAAGCACTCTTTGCTGGTGATTCTGAGCTGCAGCAACTCCTTCATATATTCAGATTGTTGGGCACT CCTAATGAAGAGGTGTGGCCAGGGGTTAGTAAACTAATGAACTGGCATGAGTATCCTCAGTGGAATCCTCAAAGTTTGTC AACTGCTGTTCCAAATTTGGATGAGCTTGGACTGGATCTACTATCTGAAATGTTGCACTATGAACCTTCCAAGAGGATCT CAGCAAAGAAAGCTATGGAACATTGTTACTTTGATGACCTGGACAAGACCTATCTTTAG
Protein sequence (LotjaGi5g1v0000600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKSGVVLSVKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDV KQGQSKEGKTVLYLVFEYMDTDLKKFIRTFRQTGQNVPPKTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTNML KIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVACIFAELVTKQALFAGDSELQQLLHIFRLLGT PNEEVWPGVSKLMNWHEYPQWNPQSLSTAVPNLDELGLDLLSEMLHYEPSKRISAKKAMEHCYFDDLDKTYL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 311 | 305 | 5.3E-187 | – | |
| PANTHER | 7 | 311 | 305 | 5.3E-187 | – | |
| Pfam | 7 | 171 | 165 | 2.0E-6 | – | |
| Gene3D | 10 | 100 | 91 | 2.4E-31 | – | |
| SUPERFAMILY | 10 | 308 | 299 | 1.07E-92 | ||
| SMART | 14 | 304 | 291 | 1.7E-90 | ||
| Pfam | 14 | 304 | 291 | 4.2E-70 | ||
| ProSiteProfiles | 14 | 304 | 291 | 44.075 | ||
| ProSitePatterns | 20 | 43 | 24 | - | ||
| Gene3D | 102 | 311 | 210 | 2.7E-66 | – | |
| ProSitePatterns | 141 | 153 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0000600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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