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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0000600 |
| Transcript ID | LotjaGi5g1v0000600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT1G76540.1 cyclin-dependent kinase B2;1; Swiss-Prot: sp|Q8LF80|CKB21_ARATH Cyclin-dependent kinase B2-1; TrEMBL-Plants: tr|I3SYT6|I3SYT6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0000600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:129037..130971) extracted from Lotus japonicus Gifu genome v1.2.
ATTGAGAGATTGAGAAAGAAGAGAGAGAGATGGAGAAGAGTGGAGTAGTTTTGTCGGTGAAGGAGGCATTCGAGAAGCTG GAGAAGGTTGGAGAAGGAACTTATGGGAAGGTGTATAGGGCAAGAGAGAAGGCTACTGGGAAGATCGTTGCCCTCAAGAA GACTCGCCTCCATGAAGACGAAGAAGGTGTCCCTCCCACCACTCTCCGTGAGGTTTCCATTCTGCGAATGCTCTCTCGCG ATCCCCATGTTGTCAGGTACTAATCTTTCAATTCGAATTCGAATTGGGATTTTTTATAAACCCTAATTTAATTTAATTTA ATCTAATCTCCACACACACACACACACACACACACACACAGGTTAATGGATGTTAAACAAGGTCAGAGTAAGGAAGGGAA GACAGTGCTGTACTTGGTCTTTGAGTACATGGATACCGATCTCAAGAAATTCATTCGCACTTTCCGTCAAACTGGACAAA ATGTCCCACCCAAAACCGTCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCATGGTCATGGAATCTTG CACAGGTAACCTAACCTAACCTAACCTAATCTCTCTTTCGAATCTTATTTTATCTATCTAATCAACACAAGATTAAGATT GGGTCTTTCTTTCTTTATGAAGGGACTTGAAGCCTCACAATCTCTTGATGGATCGAAAAACTAATATGCTTAAAATTGCT GATCTTGGCCTTGCTCGAGCATTCACCGTGCCAATTAAGAAGTACACGCATGAGGTATATTATACATTCTGATTGCTAAT TCATGTTTTTGGTTCATCATTCATTACCTTACTTAGTTATTGCACTTTTCTGTCTCTGGTTTCAGATACTCACCCTGTGG TACAGAGCTCCTGAAGTCCTTTTGGGAGCCACCCATTACTCAATGGCAGTGGACATGTGGTCCGTTGCCTGCATCTTTGG TAAGCATCATCATCTAACTGGATTTTCCTACATTTTCACACCTCTATCATGTCGAGTTTCTACATCACAGAAGCTAGTAC TATAGGTTGTGTTTGTATTAGATTTCAATTTAACTGGCCCTCCAAGTTGTTGTATCATCTATATTCCAAAAACAACCAAA AATGGCACAGGTAAAAACCAAAAAGAACATTCCTGTGACAGTACACTAGTACTATAGACATTGAATTGAATGTACTTACA CTATACTAGTTCAGTTTACAGTACATTCCTGTTATTAGCCTTGATTCCCCTCCTTTTTTGCCAAAAGGATTTTCCTATGT TATTATGGGGCGGGCCGGGGGTAGTAGTATTATAATCTTAATATGTCCCTGAGAAAAGTTGCAAGAAATGCTGATGTGTG AGCACTTACTATGTTATTTGATAGAAACTACTACCTCTTATTGTGTTTAGTATTGTAACATTTATCGCTCTCTTCTTCAT CTGGAATGTAGCTGAACTTGTAACCAAGCAAGCACTCTTTGCTGGTGATTCTGAGCTGCAGCAACTCCTTCATATATTCA GGTGGAAATCTAGCAAAATTATTGTTTATCATCACCTGCTTAGTTGCTTCATTTTGTGTATGTGTTGTTATATAGTTGGG CACTCCTTTTTTGTGCAGATTGTTGGGCACTCCTAATGAAGAGGTGTGGCCAGGGGTTAGTAAACTAATGAACTGGCATG AGTATCCTCAGTGGAATCCTCAAAGTTTGTCAACTGCTGTTCCAAATTTGGATGAGCTTGGACTGGATCTACTATCTGTA AGTTGGCTGACCCTTAACTTACTCCTTTGATCCTTTCTATTGTAGCAATTGTTGTTGACTTTCATCATCTCTTCATTTTC AGGAAATGTTGCACTATGAACCTTCCAAGAGGATCTCAGCAAAGAAAGCTATGGAACATTGTTACTTTGATGACCTGGAC AAGACCTATCTTTAG
CDS sequence (LotjaGi5g1v0000600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGAGTGGAGTAGTTTTGTCGGTGAAGGAGGCATTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTATGGGAA GGTGTATAGGGCAAGAGAGAAGGCTACTGGGAAGATCGTTGCCCTCAAGAAGACTCGCCTCCATGAAGACGAAGAAGGTG TCCCTCCCACCACTCTCCGTGAGGTTTCCATTCTGCGAATGCTCTCTCGCGATCCCCATGTTGTCAGGTTAATGGATGTT AAACAAGGTCAGAGTAAGGAAGGGAAGACAGTGCTGTACTTGGTCTTTGAGTACATGGATACCGATCTCAAGAAATTCAT TCGCACTTTCCGTCAAACTGGACAAAATGTCCCACCCAAAACCGTCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTG CTTTCTGCCATGGTCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGATCGAAAAACTAATATGCTT AAAATTGCTGATCTTGGCCTTGCTCGAGCATTCACCGTGCCAATTAAGAAGTACACGCATGAGATACTCACCCTGTGGTA CAGAGCTCCTGAAGTCCTTTTGGGAGCCACCCATTACTCAATGGCAGTGGACATGTGGTCCGTTGCCTGCATCTTTGGTA AGCATCATCATCTAACTGGAAACTACTACCTCTTATTGTGTTTAGTATTGTAA
Protein sequence (LotjaGi5g1v0000600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKSGVVLSVKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDV KQGQSKEGKTVLYLVFEYMDTDLKKFIRTFRQTGQNVPPKTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTNML KIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVACIFGKHHHLTGNYYLLLCLVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 7 | 171 | 165 | 8.0E-7 | – | |
| PANTHER | 7 | 213 | 207 | 5.8E-130 | – | |
| PANTHER | 7 | 213 | 207 | 5.8E-130 | – | |
| SUPERFAMILY | 10 | 213 | 204 | 2.97E-67 | ||
| Gene3D | 10 | 100 | 91 | 1.3E-31 | – | |
| ProSiteProfiles | 14 | 230 | 217 | 36.951 | ||
| SMART | 14 | 230 | 217 | 5.0E-48 | ||
| Pfam | 14 | 212 | 199 | 3.8E-56 | ||
| ProSitePatterns | 20 | 43 | 24 | - | ||
| Gene3D | 101 | 225 | 125 | 3.5E-37 | – | |
| ProSitePatterns | 141 | 153 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0000600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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