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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0007700 |
| Transcript ID | LotjaGi5g1v0007700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin response factor; TAIR: AT1G19850.1 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein; Swiss-Prot: sp|P93024|ARFE_ARATH Auxin response factor 5; TrEMBL-Plants: tr|I1MC56|I1MC56_SOYBN Auxin response factor; Found in the gene: LotjaGi5g1v0007700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:1765506..1773985) extracted from Lotus japonicus Gifu genome v1.2.
CTATAGCCTCTGCTTTTCCCATTTTCCATTGAATACAACTTTTCTTTTGGTCTTAAACAATTATTTTATGAATATATATA GCTTAAAGCTGCAAAGGGTAGGACTTGGTAGCAGCATGCACTGTGCTTTCTGTTTCAAGCAAAGAGAAAGAAGAGAGAGA GAGAGATTTAGTTTTAGCATTTGTTTTATTTATTTGGCATTGGTGCTTGTGCTTGAGAAAGTGTGAAACAAAGAAAGAAA AAAAGAAGCATGCAGTATCATCAGGGTCAGTGTGATGAGTAGTTTCACTGAAGAAAGGTTGGTTTCTTTTTAAGAAAAAC AAAAAAACAAGTTCTCATGCTTAGGTACGCGTGCTTTGATGGGAAGTGATGAGTTTTTAGCCCCACCTCGCTCAAAGAAA GAATGAAAAGATCTGCAAATTGTTTCTTTTTTCGCAGGTTTTGTTCCTTGTTCTGTTGTTGGATTCTTTTGTTTTTGACA ACAAATGAGATTGATAGGTAGATAGATAGCATGATAGATTCTCTATGTTAAGAAGAAGAATATGGTCCCTTGTTTTCTAC CACTCTTTTGTTCTTCCTTCTCTGCCCAACAACAACACAAGCAACTGAGGGTGTGGAAGGAGAATTCATCAGTGTTTAGT GTGATGCTTCTTGTGAATTGAAGACGTGGAAAAACAGGTTCCTCTAGTCTTGTGGTGGAGCATAGGAATAATATATTGAA TGGCTTCCGTAGAAGAAAAGATTAAAACTGGAGGAGTAGGAGTAGGTGTTGGTGTTGGAGTTGTTGGGGGTCAAACTCAA ACTCAAAATCTTGTTGCTGAGATGAAACTGCTGAAGGATTGTGGTTTGTTTCCTTTTTTTGTTTGTATTGAGGAAACCAA GATCAATCTTTTACTATGGTTTTTCACATGCCTTTTTATGCTGCTAATTTTTTCAGGGGTGAGAAGGACTTTGAACTCAG AGTTATGGCATGCTTGTGCTGGCCCTCTTGTATCATTGCCTCAAGTTGGGAGCCTTGTGTATTACTTCCCTCAGGGACAT AGTGAGCAGGTGAATGAACACTTATTCTCATGTTATAAACCATATTTCATCAATGTTCGGAAATTCTTCTACAATTGATT CTAAAGCCTCTAGAATCAACTCTCCAAAGCTCCTGTGTGTAGCTTCTTCTTAAATTGATTATAAAACTGCCAGAATCAAC TCTCTGGAGCTTCTGGCTTGAACCGCCAGAATCAACTCTCGAGAGCTTTTATGAGAAGTTTGAGTCTCAGAATTGATTCT GTGCAATAATAAGCTGATTCAAACAGGCAATTTTTTTTTATCTCTAACTGATTAGTAGTAACTAAGGATGCTTAGAAAGG TTGAGAACCGAACTATTTTAGTCTCTTTTTTGTATTATTGTTATATTCAATCAACCTAGATTCTAGTTTCTATTGATTGG CTGAAGCATATGTGTGTTCTTAACAGGTGGCAGCTTCTACTAGAAGAACAGCAACCTCACAGATTCCAAATTATCCTAGT CTCCAATCTCAGTTACTGTGCCAAGTTCAAAATGTCACACTACATGTGAGTGTTCTGGAGTGGTTGACCACACTTACAAT TTCTGTCATGAAGGGCTAATTTCAGGTTCAAATTGTTATGACCCCTCAATAAATTTCACCATTTTCTCTGTATGTTATGA TAGGCAGACAAGGAGACAGATGAAATCTATGCTCAAATGAGTCTCCAACCAGTGAATTCTGTAAGCTTGGAAGTCTCAGT TCTGGGATTATTGTTATTTCACATTTGACTATGAAAATTATTTGTGATCTATTGGCCATTCTTCTCAGTATAAAGTTTCT TGTGTTAGGAAAAAGAAGTATTTCCTATATCTGATTTTGGGACAAAGCAAAGTAAACATCCCAGTGAGTTTTTCTGCAAA ACTTTGACTGCTAGTGACACCAGCACACATGGTGGCTTTTCAGTTCCGCGAAGGGCGGCAGAGAAGCTCTTTCCTCAATT GGTATGTGGCTATAACACCAGTTGGTTTTGATTGCAAACATTCTTTTTATGTTGGGTAAAATGCTGTGCAAAACCATTTT TCGGTTTTGCTTTGCTGGGTAAAATGTTGTGCCTGAATCACCATTTGGTTAATGCATTTTCATTTCAGGATTACACAATT CAGCCCCCAACACAAGAGCTTGTGGTTCGTGATTTGCATGACAATACCTGGACATTTCGACATATATACCGGGGTGAGGA TGTTTTCTGCATTCAACTACTCTATCATTTGATTTGGTAGAAAGCAGGAATCAATTTTTTGTGGTTTTAGATTCTATTTC TTAAAAAGCACAACTACATCCTCCTTTTTTCGCTGCAAGTTATTGTTAGGATTTGCAGCTTTTCTTTGAGCACATTTTTG TATGAAGGGCTTGGATTGAGTTAGAGTTCTTATATTGCAACTTTTTTTGTACATTTTATTGTAGGTCAGCCAAAGAGACA CCTTCTCACCACAGGGTGGAGTTTGTTTGTAGGCTCAAAAAGGCTTAGAGCAGGTGATTCTGTTCTTTTTATCAGGTAAC TTGGTGGCTACTAGCTGAATTCATCACTATTTAAATGTGTTAATATAGAAGAAGGCATTTTCAATTTTCAAGGAAAAGGG AAGTATAACACTGGAGTACTAAGTGCATGTTTAGAAAACCTTCAAAATCAATTATGTGGAGAAACTTCTGGCCTTCTGGG TGAGAACAATAAGCTGATTCAAACATGTGATGAGTTTTGTTTGCTTCAGTTTTTTCAAGTGGTTGCAACTTGCTAGTAAA ATCATATAGTTATGTTTATTTATAGTTAGGTTAACTTTTGTGCTAAGCAAAGGCCACACAATTCTTGTTTATCCACCATG ATGACATTGCTTATAATGAATTCATAATATACATAACTTTCTTCACACTAAATGTGTTGTGTAAATTGTCACAAGGGATG AGATATCGCAATTGCGAGTTGGTGTGAGGCGTGCTAATCGTCAACAGACAACACTGCCGTCATCAGTACTCTCTGCTGAT AGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCATGCTGCTGCTAATCGCAGTCCATTCACTATTTTCTACAATCCTAG GTATGTTCAATAATTAATACGTCCATGCTCTGACCTAACATATATCTAAGACATAGTTCTGTTGAAACTATAGCTTCTTT TGTAATATCTGTTTCTACTTGTTTGCAGGGCATGTCCGTCAGAGTTTGTTATTCCGCTGGCTAAATACAGAAAGGCTGTG TATGCGAGTCAGCTCTCAGTTGGCATGAGGTTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGGTAATTTCT TGAATACTTGGATTGTCCTATAGCCAAATATGCATGATAAACTATTTTGTTGTGATATATGAAGAGTCCGGAACAAACAG GAAAATTTGACATATACTTGATCTTTTGTACAGATATATGGGCACAATTGTTGGTATCAATGATGTGGATCCTTTGAGGT GGCCTGGTTCTAAGTGGCGAAATATTCAGGTAGATTAGCATCAATTCTGATGAAATAGAAGCTGATCCAAACACGCTTCT CCCAATAATTGATTTTGACTTTACCATCAATTCTAGAATGAATCCAAACATGTTCTAAGTTCTGGTCACCCCCCATCATA AGCTTGTTCTACATGATAGGTTCAATATTAAGTTCTATTATTCATGATTTATTGTATCATACAATCTAGCATCTCTATAA AGCATCTGTTGGAGCTAAAGCTTAGTGAAAATAGTTGGCCTGCTATTCTGAGTCAGCAGCTGAGATGCTATCAATTTCTC TATAAACAGGTGGAGTGGGATGAACCAGGGTGTGGTGATAAGCAGAATAGAGTTAGTGTATGGGATATTGAGACTCCTGA AAGCCTTTTCATCTTTCCTTCTTTGACTTCAAGTCTGAAAAGGCCATTACAATCTGGACTTTTAGGTATGTTTCGTAGTG CATGTTTGGATACACTGTAGAAAACCACGGTGAAGCCAAAATCATGGTAGACATAAGTAAAATCTAAGGGAAGTTGTTTC TGTCGCTCATTGTGGTTTTCTACCGTGTATCCAAACATACCCTCTCTTCCTACTCTATTTATGTATCTTCAATTTGATGA TATATTTGTTGGTTGGTGCAGAAAATGAGTGGGGAACTTTGTTAAGAAAACCTTTTATAAAAGCTCCTGAAAGTGGAGCA ATGGAGCTCTCAAGCTCAATACCAAATCTATACCAAGAACAACTCATGAAAATGCTTTTTAAACCCCAAGCTGTTAACAA CAATGGAGCTTTTCCTTCTCTCATGCAACAAGAATCTGCTGCTACAAGAGGTCCCTTGCAAGTAGATAACCAAAATGTTC ATCTTGCAAGTACAGGGAGCATGACACTAAAAAATCCATGCTCACAATCTTCCCAAAACTCTCAAACCACACTGCTGAAA AGTGATCAGCCTGAAAAATTGCATCCTCAGCCCAGAATTGACAATCACCTAACTTCTGGAACAGTCACTGACAACAAGTC AAGGTTAGAATCTGAGGTGTTAGATCATGTGTTGGACTTTCCTTCCATGGAAGGATGCAAGATTGAAAAAATGGTCACAA ATCCTATTAACCCTCAAAACCTAGCAAGCCACTTGACAATCAATAATCAAAACCAGAATCCATTACTCCCACAATCCAGT ACATGGCCTATGCAGCACACTCAGTTAGAATCATCCTTATCTTATCCCCAAGTTATTGACATGTCCCAATCTGATTCGGC TATTGTGAATGGCACACTTCCGCAGCTAGACATTGAAGAATGGATGGCATATTCTTCTTGCCAACCTTTTGCTGGACAAA ATAGATCGAATGGGCCTTTCTCAGATTTTCAAGAACATGCCTCACTTCAAGCTCAAGTAGTGAATAATCCCTCTTTAACT TCAACTAACCAAGAAGTGTTAGATCATTATGTCAAGAATTTGAAGTTTTTCTCCCAAGCTGATCAACTAACATCCATCTA TGGCTTCAACGGTATATCTAGTTCAAACAACTTGAGGGATCTCTCATCTGAAAGCAATAACCAAAGTGAAATTTGTGTGA ATGTTGATGTTAGTAACAGTGTAAATACCACAACAGTTGATCCTTCTACTACTTCAAGTACCATTTTGGATGAGTTTTGC ACAATGAAAGAGAGGGACTTTCAGCATCCACAAGAGTGCATGGTGGGAAACTTGAGTTGCAGCCAGGATGGCCAGTCTCA GATAACCTCAGCAAGTCTAGCAGAGTCACATGCCTTTTGTCTGAGAGACAACTCAGGTGGCACATCTTCAAGCCATGTTG ATTTTGATGATAGCAGTCTTCTGCAGAATAACTCATGGCAGCAAGGTTCTACTCCCATCAGAACCTACACCAAGGTTTGT AATGGAGAAAGTCTATTGCTCTGCATGTTTGGATAAACTTATTTTCTCTCAGAATCAATTCTGACACTCATAGCTACTCA CAATAGCTTCTCCGCAGAATTGATTTTTGTTGTAGAATCAATTCTATAAGAATTTCCAACCATGCTATAGATGATGTTGT TTTATCTTATTATGATTCATGAAAGTTTTACTTCTGCAATATAATGTTACCATCAAAAGTATTGTTTGTTTTGGAAGTTC AACTATATTATTTGGCTCAACATGTATTTCATCATGGTTTTGTGCTCACAGGTGCAAAAGGCAGGTTCTGTGGGAAGATC AATTGATGTCACTACTTTCAAGAACTATGAGGAGTTGATTCGCGCAATTGAATGCATGTTTGGACTCGATGGTTTGTTGA ATGACACTAAAGGTTCCGGGTGGAAATTGGTGTATGTAGATTATGAGAGTGATGTTCTACTTGTAGGTGATGATCCTTGG GAGTAAGTTTCTTACACTTCTCTTGTAATCTGTGATCTTCCATGCTTAAGGCTGTGTTTGGATATCAGGTAGCACTAGTG CAAACAGATTCTAGCACGCACTTTGAGGTCAAAAGTGAACAAAACTCTTCTTAGTGCATGTTTGGAATTTATTAGTTAAG TGCAACGTAAACAGACTTTATCTCGAAGTGAGTGCTAACATCCGGTTGCCTTGATGCTAATGAATATTCATACACAGGCT AATAGATTGGGAATAAAGACTGTTCACATTGCACTCAATTGATATCAAATGCACACTATGTTTAACAGGCTTATTATGCT TATAGAGTTCTGTTAGATCTTGTGTGGCACTCTGATATATTATCCTTCTTCCTAATGTTCCTGTGCAGAGAATTTGTGGG GTGTGTCCGGTGTATCAGAATTTTATCACCTTCAGAAGTTCAACAGATGAGTGAAGAGGGCATGAAGCTTCTGAATAGTG GAGCCTTGCAAGGGATCAATGTTTGAGTTTTCAGGTAGCACAAAAGAGCCACTAAGCTATGCATTGTGATTTTCTTTTAA AGTAAAGGCATTTGTTGTGGGACAAGTGTAGTTTTACTTTGTCCTTATTACAAAGGTGCCATTTAATGCATAAACTGTGA ATCACTTGACAAAGATCGGAGCAATTAGTAGGTATGGACCAAATATATCGAAGTTTATGTTCCAATGAGTCAACAGTTAC ATATACCTTATGTTGTAAGGAATTCTTGCAGGCAAGTGGAAATATTGTTCTTAATGCTATATTACTATGCATCATTGAAT CTTGCAAATAATGATTCAATGCACTCCACATGGGAAAAAGATTAGATAACCAACCACCTAAAACTATATCCTTTTTGTAA ATGCATGTCTCTAGTTTTATTTTCTTAGTTGTAAACTAAACTTAGTATTACAATAAGTCATTTCATTAACTTGGATTAAC TAGTGATTAGTGAAGTTCTTAAATAACATGATTTTTAAAATAAAATGTAACGGTCAATAGTTTTGATTTGTTATGGGGAA AAATTGATATTTATCCACTATTAATAAGTTCACTTTAAAATTTAAATTAACATATTGACCTAAAGTTTAGGTCTTTAGGA AGTAGGGTTAAAGTTGAAGGATTAGCTTTTAGTTTTAATTTTGCAAATTGGGTGGTCTAGGCGGGTTGCATACCCCAACT CATCCCTCCGAACACAGCTCATTTTACCACCTCTAATTGCCACCCTTGAACTATGTTGCTGCCACACATTACCGTCCTCT AACACTAATGCCACCACCCTTCTCATCCTAATACCCTCCATCAATCACAATTGAATGCCTTAAGCAACAACAACTTTGGT TGATCGGGTTGATGGTGTAGGGTAGTAATGATGATGCAGGTGGAGCAGTGGTGGCAATGGAAGGTGGCGAGCGAGTGAGT GTCAGGTGATGGAGGAAGGAGCCATGGTTGATGCCAGGTGGTTGTAATTTCAATGATGGGTTGAGGATGTCAGGTGGCAA TGTCGGCTGCGGAGAGTGCTGACAGAGATGGGGTAGGGGGTGAGGCAGTGGCGGTGGTGGAGGGTTATAATGTGATTTAT GCTTGTATATTTTTATTTTAGAAGTAAGTTTGATAAATTAATCTTATTTGGATAATATTAGTTAAAAACACTTTCAAATG TGTGTAATTATTAAAAAGTGTTACACTTGAGATGAGTAAAGATGAATGTGTGTTACGAGTGTAAGATAATGAAGATCATA TTTTTCACAGTATAGTTCAAACTGAGTTTGGCCAACGGAAAACTGACTCTTAAATTGGGTTGAGATGAAAGTAGGTTTAG GGATGTAACTGAGTTTGGTAAATGCACTTTTAAAATTATCAAACTTGATAACATAATGTTTTTTTTTAAACGGATGACAT AATGTTAGATATAAAGCAAACTGAGTTTAGCCCTCCCAACAAAAAACCAAAAGAGTCTTAGTAACTCATGTTAGTTAGGT CATAGACCCAATGAATAATGAATATGATCCCTATTTTGACCCCAACGCATGGCACTACTAGCCCCATTTGGCTACACCAT AGCAAGCATCTCACGATATCCGTGTTGTTATTAGTATAGTAATAAAATAGAAAGCTTCAACTTGAAGGTTTCATAATTAC ATAGAAAGCTTCAATTTCAAGGATTTATAATTACTACTGATAATATCTAGTTTAAGATTTAAAGGGCGGGAAAATCAATG CTCTTCAATGTTAACCTGCAGAAATTGCTGATGATGAGTTAGATATATCATAAGGTAAAGACTACATCTTCATAAAATAT TAAAAAAGTTGATCAGGTGCGATAATTTAATTGAGCCTCAACCTGCTTCTCAAATCTCTACGTTGTAGGTTGATGCTCTA ATCTAATACACCTTGTGAGTAAACAAGGTCAGTGAGATTTATTGAAGTTTTGTAAAGCCAGTATGTGCAAGTTTGGTTTC ACCATTTGCACTGAATCCGAGGCATTACTCATAAGTTAAGTGTATGTTTAGATTTCCATTGAACTCAACGTGAATCCACG
CDS sequence (LotjaGi5g1v0007700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCGTAGAAGAAAAGATTAAAACTGGAGGAGTAGGAGTAGGTGTTGGTGTTGGAGTTGTTGGGGGTCAAACTCA AACTCAAAATCTTGTTGCTGAGATGAAACTGCTGAAGGATTGTGGGGTGAGAAGGACTTTGAACTCAGAGTTATGGCATG CTTGTGCTGGCCCTCTTGTATCATTGCCTCAAGTTGGGAGCCTTGTGTATTACTTCCCTCAGGGACATAGTGAGCAGGTG GCAGCTTCTACTAGAAGAACAGCAACCTCACAGATTCCAAATTATCCTAGTCTCCAATCTCAGTTACTGTGCCAAGTTCA AAATGTCACACTACATGCAGACAAGGAGACAGATGAAATCTATGCTCAAATGAGTCTCCAACCAGTGAATTCTGAAAAAG AAGTATTTCCTATATCTGATTTTGGGACAAAGCAAAGTAAACATCCCAGTGAGTTTTTCTGCAAAACTTTGACTGCTAGT GACACCAGCACACATGGTGGCTTTTCAGTTCCGCGAAGGGCGGCAGAGAAGCTCTTTCCTCAATTGGATTACACAATTCA GCCCCCAACACAAGAGCTTGTGGTTCGTGATTTGCATGACAATACCTGGACATTTCGACATATATACCGGGGTCAGCCAA AGAGACACCTTCTCACCACAGGGTGGAGTTTGTTTGTAGGCTCAAAAAGGCTTAGAGCAGGTGATTCTGTTCTTTTTATC AGGGATGAGATATCGCAATTGCGAGTTGGTGTGAGGCGTGCTAATCGTCAACAGACAACACTGCCGTCATCAGTACTCTC TGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCATGCTGCTGCTAATCGCAGTCCATTCACTATTTTCTACA ATCCTAGGGCATGTCCGTCAGAGTTTGTTATTCCGCTGGCTAAATACAGAAAGGCTGTGTATGCGAGTCAGCTCTCAGTT GGCATGAGGTTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATATATGGGCACAATTGTTGGTATCAATGA TGTGGATCCTTTGAGGTGGCCTGGTTCTAAGTGGCGAAATATTCAGGTGGAGTGGGATGAACCAGGGTGTGGTGATAAGC AGAATAGAGTTAGTGTATGGGATATTGAGACTCCTGAAAGCCTTTTCATCTTTCCTTCTTTGACTTCAAGTCTGAAAAGG CCATTACAATCTGGACTTTTAGAAAATGAGTGGGGAACTTTGTTAAGAAAACCTTTTATAAAAGCTCCTGAAAGTGGAGC AATGGAGCTCTCAAGCTCAATACCAAATCTATACCAAGAACAACTCATGAAAATGCTTTTTAAACCCCAAGCTGTTAACA ACAATGGAGCTTTTCCTTCTCTCATGCAACAAGAATCTGCTGCTACAAGAGGTCCCTTGCAAGTAGATAACCAAAATGTT CATCTTGCAAGTACAGGGAGCATGACACTAAAAAATCCATGCTCACAATCTTCCCAAAACTCTCAAACCACACTGCTGAA AAGTGATCAGCCTGAAAAATTGCATCCTCAGCCCAGAATTGACAATCACCTAACTTCTGGAACAGTCACTGACAACAAGT CAAGGTTAGAATCTGAGGTGTTAGATCATGTGTTGGACTTTCCTTCCATGGAAGGATGCAAGATTGAAAAAATGGTCACA AATCCTATTAACCCTCAAAACCTAGCAAGCCACTTGACAATCAATAATCAAAACCAGAATCCATTACTCCCACAATCCAG TACATGGCCTATGCAGCACACTCAGTTAGAATCATCCTTATCTTATCCCCAAGTTATTGACATGTCCCAATCTGATTCGG CTATTGTGAATGGCACACTTCCGCAGCTAGACATTGAAGAATGGATGGCATATTCTTCTTGCCAACCTTTTGCTGGACAA AATAGATCGAATGGGCCTTTCTCAGATTTTCAAGAACATGCCTCACTTCAAGCTCAAGTAGTGAATAATCCCTCTTTAAC TTCAACTAACCAAGAAGTGTTAGATCATTATGTCAAGAATTTGAAGTTTTTCTCCCAAGCTGATCAACTAACATCCATCT ATGGCTTCAACGGTATATCTAGTTCAAACAACTTGAGGGATCTCTCATCTGAAAGCAATAACCAAAGTGAAATTTGTGTG AATGTTGATGTTAGTAACAGTGTAAATACCACAACAGTTGATCCTTCTACTACTTCAAGTACCATTTTGGATGAGTTTTG CACAATGAAAGAGAGGGACTTTCAGCATCCACAAGAGTGCATGGTGGGAAACTTGAGTTGCAGCCAGGATGGCCAGTCTC AGATAACCTCAGCAAGTCTAGCAGAGTCACATGCCTTTTGTCTGAGAGACAACTCAGGTGGCACATCTTCAAGCCATGTT GATTTTGATGATAGCAGTCTTCTGCAGAATAACTCATGGCAGCAAGGTTCTACTCCCATCAGAACCTACACCAAGGTGCA AAAGGCAGGTTCTGTGGGAAGATCAATTGATGTCACTACTTTCAAGAACTATGAGGAGTTGATTCGCGCAATTGAATGCA TGTTTGGACTCGATGGTTTGTTGAATGACACTAAAGGTTCCGGGTGGAAATTGGTGTATGTAGATTATGAGAGTGATGTT CTACTTGTAGGTGATGATCCTTGGGAAGAATTTGTGGGGTGTGTCCGGTGTATCAGAATTTTATCACCTTCAGAAGTTCA ACAGATGAGTGAAGAGGGCATGAAGCTTCTGAATAGTGGAGCCTTGCAAGGGATCAATGTTTGA
Protein sequence (LotjaGi5g1v0007700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASVEEKIKTGGVGVGVGVGVVGGQTQTQNLVAEMKLLKDCGVRRTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQV AASTRRTATSQIPNYPSLQSQLLCQVQNVTLHADKETDEIYAQMSLQPVNSEKEVFPISDFGTKQSKHPSEFFCKTLTAS DTSTHGGFSVPRRAAEKLFPQLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFI RDEISQLRVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVYASQLSV GMRFGMMFETEESGKRRYMGTIVGINDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWDIETPESLFIFPSLTSSLKR PLQSGLLENEWGTLLRKPFIKAPESGAMELSSSIPNLYQEQLMKMLFKPQAVNNNGAFPSLMQQESAATRGPLQVDNQNV HLASTGSMTLKNPCSQSSQNSQTTLLKSDQPEKLHPQPRIDNHLTSGTVTDNKSRLESEVLDHVLDFPSMEGCKIEKMVT NPINPQNLASHLTINNQNQNPLLPQSSTWPMQHTQLESSLSYPQVIDMSQSDSAIVNGTLPQLDIEEWMAYSSCQPFAGQ NRSNGPFSDFQEHASLQAQVVNNPSLTSTNQEVLDHYVKNLKFFSQADQLTSIYGFNGISSSNNLRDLSSESNNQSEICV NVDVSNSVNTTTVDPSTTSSTILDEFCTMKERDFQHPQECMVGNLSCSQDGQSQITSASLAESHAFCLRDNSGGTSSSHV DFDDSSLLQNNSWQQGSTPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDV LLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGINV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 37 | 920 | 884 | 0.0 | – | |
| PANTHER | 37 | 920 | 884 | 0.0 | – | |
| SUPERFAMILY | 142 | 282 | 141 | 6.8E-46 | ||
| Gene3D | 151 | 255 | 105 | 8.8E-41 | ||
| CDD | 152 | 253 | 102 | 8.67844E-23 | ||
| ProSiteProfiles | 153 | 255 | 103 | 12.788 | ||
| SMART | 153 | 255 | 103 | 4.1E-23 | ||
| Pfam | 153 | 254 | 102 | 7.8E-21 | ||
| Pfam | 279 | 362 | 84 | 7.2E-33 | ||
| Gene3D | 317 | 389 | 73 | 7.3E-34 | – | |
| MobiDBLite | 487 | 510 | 24 | - | – | |
| MobiDBLite | 487 | 531 | 45 | - | – | |
| Gene3D | 816 | 910 | 95 | 4.3E-37 | – | |
| Pfam | 817 | 908 | 92 | 3.1E-11 | ||
| ProSiteProfiles | 821 | 905 | 85 | 23.746 | ||
| SUPERFAMILY | 834 | 900 | 67 | 5.79E-8 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Response to hormone | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus. |
Expression pattern of LotjaGi5g1v0007700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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