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LotjaGi5g1v0015500.1

Overview

Field Value
Gene ID LotjaGi5g1v0015500
Transcript ID LotjaGi5g1v0015500.1
Lotus japonicus genome version Gifu v1.2
Description Sugar transporter, putative; TAIR: AT1G75220.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9FRL3|ERDL6_ARATH Sugar transporter ERD6-like 6; TrEMBL-Plants: tr|A0A072VFC5|A0A072VFC5_MEDTR Sugar porter (SP) family MFS transporter; Found in the gene: LotjaGi5g1v0015500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:3102454..3109582) extracted from Lotus japonicus Gifu genome v1.2.

GTAGATTTAAAACATTTTTCTTACAAGCTCGTGCTGTAATATAGTATGTTTCATCTGCTTATTCAGAACTTCATGCCAAG CTGGCTATCCATGGAAGTCAACTCACTCTTTATTTCTTTCCTTCCATAGTTATAGCAGGTTTCAGTGATCGAATGAACAA AGAGAGAGTTTAAGGAAATCATAATCATAATCATAATCATAGCAGAAGAAGAAGCAGAAGAAATAATGAGTTACAGGGAA GAGAATGAAGAAGGAAGGGATCTCAAGAAACCATTCCTCCACACAGGAAGCTGGTATCGTATGAGTGGCAAACAACAATC CAATTTGTTTGCATCTGCCCATGAAGCCATTCGTGACTCTTCCATCTCTGTCTTTGCATGTGTTCTCATTGTTGCTCTGG GTCCTATTCAGTTTGGTTTCACTGTAATCAAATTCTTCTATTTTCTACTTCTTCTACTCATTCAGAGTTCAAACAGAGCT TCATTGTGATTTTCACCATTTGTTGCAGGCGGGTTATACATCACCTACCCAAGCTGCTATCATCTCTGATCTGGGACTCT CAGTTTCTGAGGTTTGAATCATCAATGAGAATAATGACTCTCTCTTTGTTGATTTTTTTCCCATTTTGATCTGTTTCATT GCTTTTTATATATTAACAATGGAATTTTTTTGTTCTCTCAGTTCTCTTTGTTTGGTTCTCTGTCCAATGTGGGTGCCATG CTTGGAGCAATAGCTAGTGGACAGATTGCTGAATATATAGGACGCAAAGGGGTAACTCTATTTTCTTTCCTTTTTCCTTT ATTTCAATGTTTGATGGTTAATGCTAACTTAACGATCAACATCAATTTCATGTTCTTGTATAAAATTGCAGTCTTTGATG ATTGCATCCATTCCTAATATTATTGGTTGGCTGATCATCTCATTTGCAAATGTGAGTTTGGATCATTTCATTTCCCCCCC AAAATTTATTTATAGCATGTTTTTATAGCTTGTCTTTCATCACAATCAATTTTGAAACCCAGAAGCTTCTCCGCAGAATT GATTCTAGCTTCATAATCAATATAGAAGGGTCATGGTTATTCAATTGACTCTAAATTGATTACGAGGAAAGAATTGATTC TAGAGATAATTGATTCCGGAGAGAATTGATTCTGGGTGTTAGAATTGATTTTGAGGAAGGAGAAGCCGATCGAAACATAT TTGTTTAGTCTATCCAGAGCTAAATAATTTTGAGTCCGGATCCTGAGTTTGTATTGTGGACTTGTTTTTCATCTTTCAGG ATACTTCTTTCCTCTATATGGGGAGGTTGTTGGAAGGTTTCGGTGTGGGAATAATATCTTACACGGTAGTTTTCAGATGT TTTCACCTTTTTTTTGCTAGTGTGGGATTAAGCTGTGTGGCACAGTTATTGAGTGTTCAATTTCATAGGTGCCGGTGTAC ATAGCTGAGATATCACCTCAAAACTTGAGGGGAGGTCTAGTTTCAGTTAACCAGGTAGGTTGATAATAGATACCACCAAG AGTGGATATTTCATTTGATACTTTGATGCTAGATACCTACAATTTAATAACACTCCTGGATTAGTGAACTATATTCTTTT TTTCCTTCTATAGCTCTCTGTTACCATTGGAATAATGCTGGCTTATCTTCTAGGGATTTTTGTTCAATGGAGATTCCTTG CAATTTTAGGTAATACCCTTTAAAACTTGGCAAGTTGGTAATACCTTTTATACATGATGCTGACTTGTATTTTACGTAAG ATAAGTTCCACTGAGCAATTTTATGTCTTCACATTTTCAGGAATTATACCATGTGCACTATTGATACCTGGACTTTTTTT CATTCCTGAGTCTCCTAGATGGCTGGTAAGCTTTATGAATCAGTACTCTTGAGTGTCAACGAATATGTGATGATAGTTTC TTAAAGTGGATTTGGTTTACTGAATGCAGGCAAAAATGGGCATGACAGAAGAATTTGAGACTTCCTTGCAAGTGCTTCGA GGTTCTGGTACCGATATTTCTGTCGAAGTGAATGAAATTAAGGTAACAAGAATTCATCACTTTTGTTGCATTCAACGAAA TTAAGGCAACTATTTGATGTGTCATAAGTTGACTTTAACAAAGGAATCATTTACTTCAGACTGCTGTTGCATCAGCAAAC AGAACAACTACGGTTCGATTTGCAGAGCTCAGACAAAGAAGATATTGGCTTCCCTTGATGGTATTTCTTGTCTGTCTTAA AGCCTTGGATTGCATAGCAATGACCATCAAAGCCTAACTAGTTTTTATTGACTCATTCTGTAGATTGGCATTGGACTGCT TATTTTGCAACAGATTTCTGGAATTAATGGTGTTCTTTTTTATTCCAGTACCATCTTTCAAAATGCTGGTATGCTTTACT GTTTCTTATATTCTGATGTACTAGGAGCAATATCATAGAATTATGAAGCATTTATAGAGCTGATATCTTTTGAATGATTC ACCTTAATGATCTAAATGTTCTCTTCTGGGGTCATGATAAATCATATGACTTATTTCTCCTGATTACTTCTCATCTTAGT TACTGACATTGATTTTACACAAAGAAAAAGGCACGGCTCTTAGATTGGCTTGTGTTTAAGCTTTCATTTTTATGCATAAA ATTCTGCTTAATGATCATCATGTCAACATGTATAAAACAGGAATTAGTTCGAGTGACGTAGCTACATTTGGAGTTGGCGC TGTCCAGGTTCAGCTAAAAGGAAACTTGTAATAGTCCCATTTTTTCTGTCCATCATTATCTAATAATAACCTCACAAATA TCTGCATGTTTTCCAGGTTCTTGCCACCAGTTTAACTTTATGGTTGGCAGATAAATCTGGTCGCCGGCTTCTACTTATTG TGAGTGAACTTTTCCACCATATTTAGTTACATGTGATTATTTGTTTGTTGGGTTAGAAAGATAATAGTCAAGTTTCCCAT TGCAGGTTTCTTCAGCTGCAATGACCTTGAGTCTCTTAGTTGTAGCGGTCTCATTCTATGTGAAGGTAATAAAATTTCTT TGGTTGCTATGTATAAGTCAAATATTGTGTATTACATATATGTATGCACAAGTGCTCAGAAATGGAAGAAAACTTTCAGT ACTCATGTTGTAGTTAGTACTGACAATTCAGTACTCCTTTGGGTGTCACAGCTTCTCTGGACAACTTGCACCTATTCTAT GTGTGTTTCTTTTTAGGTGGTAACTTTTCAAATTTTCTCTCAGGATTACGTATCAAAGGATTCTTCTTTATATGGGATCC TGAGCCTCTTGTCTGTGGCTGGAGTAGTGGTATGTGAATACAAGCAAATTCACTAAACAGATATAATGTTTTCGATTGCT TGTTTCTCTCACCATTCAATTCTTGCAGGCCATGGTTATTGCATTCTCTTTGGGATTGGGGGCTATGCCATGGATTATAA TGTCTGAGGTACTATAATTTGTGAATTCCCATTTTTGGCTCTTTCCAATGTACTGGAATATGCTAATTAATGATATGGAT TTTTATGTTATAGCTGCTTTTTGCTCTCTCCCCTGTCCAAAGGGATTTTTTCCCACCCATCTAGTTGTTATATATAATTA CAGTAATGAAGCTAGAATCTTATACAACACAATAAAAAACCTTTAAGATTTATAACCTACATCTTTTTGGAGTTTGATCA CTAGAAGTATAGAAGTCAATCATTTTAGTCCTTGAGTGGAGGAATTTCATATAGAAGTCCCTTAAAGTGTAATTTGTAAG TTAGTCTTGGTCCCCAAAAACATAAATGAAATAACAAGTTTATATTAGTCCTGAAAGCTGAAAGTTAATATTAAAATTCA TATCAATTCCTGAAAGTTATGTTATAATTCATATCAATCCCTACATAGAATTTCATGAGATTACAACATGCAAATGATTG TATGGATACATCAGCTAAGATTTATTCAGGTTCTTCTTGAGAAAAACATTATACTTCTGAAATAAAACAATGATTGATTG CATTTGCCAAGAGCACATAAGGTGTTGAAATAGAACTAGTACTCTGTGGTATCAGTTACATTTAATGTGATCTGTTGAAT ATTGCATCACAGATTCTTCCAATTAACATAAAAGGCCTCGCCGGAAGTGTTGCAACACTTGCCAATTGGTTCTTTTCCTG GTTGGTTACATTGACCGCAAATATGCTCTTGGACTGGAGCTCTGGAGGTTTGTGTGCATAGCATGTGTTTTCCTCTCAAT ATTTTTATTGTTTGTAGCTAACCAGAAGCTCCCTCTGTTCTTATCAGGAACCTTCACCATCTACACAGTAGTGTGTGCTT TGACTGTAGGATTTGTTGTCATTTGGGTCCCTGAGACAAAGGGAAAAACTCTTGAAGAAATCCAATCGTTTTTCAGATGA AGTTTTTCCTTTAGCAGCTTTTGATTTATTTTCTCTGTCATTTGCTGATTTGAGAATTTTTTATAGCAATGTATCTGGGA TTATGTGTGATGCAAGGGTTCATATTTGGACCTCTGATAGTTGTTCCTTATCAATTCAATTCATTTTTCTGCTCCTTTGA CTTGTTAAAATTGAAAACTAAATCAGCATCATTACTTATCTCTAACCGATTTCTCTTCCATCCAAGTTCTCCCACTTTCT CTTCCTACCGTTATTTCCCTAACACATCATTCATCATACCTCTCATTTCTCTCTCTTCTATTCCTATCTCTATAGATTTG GGTGAATTTGAGGTGTTCACAAATTTTTTTCCGGTTATAAGTTTTAAGTTGTGTAAAGCTAATAGAAAGTGACAGTTCAT GTGGGGTTTTAAAATAAAGTCCTATCTGTCATGTAAAGCAAACTGATCATGATCTTGGTTCAGTTTACAAACTGAATACC CTTATTGATAGCACTTGAGTCTTAGGTGTGGCAACATAAACTGATTTCGCCAAAAGTATTCCAATAAAAGTGTAGTGGAA AGTTCAACATTAAATAAACTAATAAAAGAGAGAAAATGCTATTAAGTTCTCAGGAAGAGAGTATTAGATTGCTGATCACT TTTAAGATGTGAAATACCATCTTGAAAGGAGGCATAACTTTAAGACTTCCTTATAAAGCAAGTTGAATAGAAATCTGCTG AAGACTATAATGCTCTTGCACACACATTCACAATGAGAAACTATCTTCTACACAAGAAGACAATAACCTAGGGATTCCCC ATATCATACTGTTCCAGTCAACTGAATTTGACTAAATGGAAAGCCATAACCACAATCATCAATCACAAAAGTGAAGGTGA AAAATTAACAGCATGATGATATCTAGGACAGAGATACAAATGGATACTAAGAATGGGTACCCTGAATTCAATTCTAATCA GTATGTTACTGAGCTATGTGCTGGGAGTGTGACTATCTATTTCCACAGGATACTTATCAATGCAATCTTCCCAGGGTCCA TTAGGGGATGACCTCACATTCCTCAGAGCCTCCCACACTGCACTGTTACACTTGAATCCACTCCCAAATGCAATCTGCCA AACCCTGTTTCCCTTCCTCACCCTCCCTTTGGCTTCTATATATGCCAACTCATACCAAATGGAGCTTGAAGAAGTGTTCC CGAAACGGTGAAGGGTCATCCTAGAAGCCTCTACATGGACAGGAAGCAGCTGGAGATTCTTCTCCAGCTCATCAATCACC GCCCTGCCGCCGGCATGTATGCAGAAATGATCGAAAGCGAGCTTGAAATCCGGTATGTAAGGCTTCATATCAGCCTTGAA CAGCTTCCTCACAAGCAAGGTTGCGAAAAACAGAAGCTGCTCACTGATTGGGAGCACCAGAGGGCCAAGTGTGGTGATGT CAGTCTTGAGTGCCCCACCAGCGATTGCCATCAAATCTTTAGACAAAGAAACACCAGTTTTTCCAGCATCATCCTGTTCC TGATAAACACACCTGAAAGCCTTATCATCAGCCCCTTTATGAGTCCTCACCACGTGAACAAGCCTATACTTTGCCCTCTT CCTATCCCTGGACTTGTTAGAGAGAAGCACAGCAGAACACCCAACTCTGAACAAGCAATTAGGGATAAGCATTGATTTCT TGTTCCCAAAGTACCAATTTTGAGTAATGTTCTCAGTGCTGACAACAACAGCATAAGTATTCCTATGAACCTGCAGCAAG TCCTTTGCAAGATCAACAGCTACAACCCCAGCACTGCACCCCATACCTCCCAGATTGAAGCTCCTAATGTTACCCCTCAA CTTATACTTGTTAACAATCATGGCAGATAATGAAGGGGTAGGGTTAAACAAACTACAATTCACAACAAGAATCCCAATTT CCTTCGGCTTGATTTTGGTGCTCTGGAAGAGATTATCCAGAGCACCAAACATAACCTCCTCGGCCTCAGCTCTAGCCGCG GTCATAGAAGGCTGAGGAGGAATATGGTGCATGGCCTCAGGCACATAGGTCTCCTCCCCGAGTCCCGAGCGCAAGAAAAT CTTGCGCTGGAACTCGAGCGAGGAGTCACTAAAATCTCCCGTGAGGCGGGAGTGCTCCATGAAGGAGCTAAAGGGCGCCT TGAGGCGGTCGGCGGGGCGGAAACAGGCGAAATCAACGAGGTAGACGGCGCGTGGGCGCGTGACGGCGTAGAGAGTGAGG CCGAAGACGAGGAAGGCGGAGCAGGTGAGGATGGTGATGAGATTGTACTGGAGGTGGAGCCATAAATGGTGGAGGTGTTC GATTTCGGTGGTTTGGGAGGCTTGGATCAATGTGATGATGATCAAAGGGACTAAGAATAGGGTCAAGAGGTTGGAGATGA GGTAGTGGTAGCCTAATTTCACGTACTTGAGGTTCACGCTCTGGAGGAAATCAGGGAGGATGATTCTGCCGTTTTGGCGG CGGTGGAGATTGGCTCCGGCGGTGGCGCCGCCTTGGTCCGCCGTGAGGGTCATCGAGTGAGAATGTGAATGTGGCGCGAA GGAGTAGTGAAAACGGTTAATTAACTGTTCCGTGTAGTGAGCGGCAACTGGGATTTTTTTATTATAATAAGAATCATTTC ACTGTGAACTGAGGAAAGGAGCAAAGAATTTTTTTTTTATAAGCCAAAAGAATATATTGAATGAAGTAAAAGGGGTACTT CAACCCAAT 

CDS sequence (LotjaGi5g1v0015500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGTTACAGGGAAGAGAATGAAGAAGGAAGGGATCTCAAGAAACCATTCCTCCACACAGGAAGCTGGTATCGTATGAG TGGCAAACAACAATCCAATTTGTTTGCATCTGCCCATGAAGCCATTCGTGACTCTTCCATCTCTGTCTTTGCATGTGTTC TCATTGTTGCTCTGGGTCCTATTCAGTTTGGTTTCACTGCGGGTTATACATCACCTACCCAAGCTGCTATCATCTCTGAT CTGGGACTCTCAGTTTCTGAGTTCTCTTTGTTTGGTTCTCTGTCCAATGTGGGTGCCATGCTTGGAGCAATAGCTAGTGG ACAGATTGCTGAATATATAGGACGCAAAGGGTCTTTGATGATTGCATCCATTCCTAATATTATTGGTTGGCTGATCATCT CATTTGCAAATGATACTTCTTTCCTCTATATGGGGAGGTTGTTGGAAGGTTTCGGTGTGGGAATAATATCTTACACGGTG CCGGTGTACATAGCTGAGATATCACCTCAAAACTTGAGGGGAGGTCTAGTTTCAGTTAACCAGCTCTCTGTTACCATTGG AATAATGCTGGCTTATCTTCTAGGGATTTTTGTTCAATGGAGATTCCTTGCAATTTTAGGAATTATACCATGTGCACTAT TGATACCTGGACTTTTTTTCATTCCTGAGTCTCCTAGATGGCTGGCAAAAATGGGCATGACAGAAGAATTTGAGACTTCC TTGCAAGTGCTTCGAGGTTCTGGTACCGATATTTCTGTCGAAGTGAATGAAATTAAGACTGCTGTTGCATCAGCAAACAG AACAACTACGGTTCGATTTGCAGAGCTCAGACAAAGAAGATATTGGCTTCCCTTGATGATTGGCATTGGACTGCTTATTT TGCAACAGATTTCTGGAATTAATGGTGTTCTTTTTTATTCCAGTACCATCTTTCAAAATGCTGGAATTAGTTCGAGTGAC GTAGCTACATTTGGAGTTGGCGCTGTCCAGGTTCTTGCCACCAGTTTAACTTTATGGTTGGCAGATAAATCTGGTCGCCG GCTTCTACTTATTGTTTCTTCAGCTGCAATGACCTTGAGTCTCTTAGTTGTAGCGGTCTCATTCTATGTGAAGGATTACG TATCAAAGGATTCTTCTTTATATGGGATCCTGAGCCTCTTGTCTGTGGCTGGAGTAGTGGCCATGGTTATTGCATTCTCT TTGGGATTGGGGGCTATGCCATGGATTATAATGTCTGAGATTCTTCCAATTAACATAAAAGGCCTCGCCGGAAGTGTTGC AACACTTGCCAATTGGTTCTTTTCCTGGTTGGTTACATTGACCGCAAATATGCTCTTGGACTGGAGCTCTGGAGGAACCT TCACCATCTACACAGTAGTGTGTGCTTTGACTGTAGGATTTGTTGTCATTTGGGTCCCTGAGACAAAGGGAAAAACTCTT GAAGAAATCCAATCGTTTTTCAGATGA 

Protein sequence (LotjaGi5g1v0015500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSYREENEEGRDLKKPFLHTGSWYRMSGKQQSNLFASAHEAIRDSSISVFACVLIVALGPIQFGFTAGYTSPTQAAIISD LGLSVSEFSLFGSLSNVGAMLGAIASGQIAEYIGRKGSLMIASIPNIIGWLIISFANDTSFLYMGRLLEGFGVGIISYTV PVYIAEISPQNLRGGLVSVNQLSVTIGIMLAYLLGIFVQWRFLAILGIIPCALLIPGLFFIPESPRWLAKMGMTEEFETS LQVLRGSGTDISVEVNEIKTAVASANRTTTVRFAELRQRRYWLPLMIGIGLLILQQISGINGVLFYSSTIFQNAGISSSD VATFGVGAVQVLATSLTLWLADKSGRRLLLIVSSAAMTLSLLVVAVSFYVKDYVSKDSSLYGILSLLSVAGVVAMVIAFS LGLGAMPWIIMSEILPINIKGLAGSVATLANWFFSWLVTLTANMLLDWSSGGTFTIYTVVCALTVGFVVIWVPETKGKTL EEIQSFFR 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 46 46 -
PANTHER 29 487 459 1.8E-256
PANTHER 29 487 459 1.8E-256
TIGRFAM 41 483 443 2.4E-91
Gene3D 43 488 446 2.3E-121
TMHMM 46 68 23 -
Phobius 47 68 22 -
CDD 50 482 433 2.16267E-174
ProSiteProfiles 52 476 425 45.173
Pfam 53 486 434 1.3E-95
SUPERFAMILY 53 484 432 3.66E-56
PRINTS 60 70 11 1.4E-16
Phobius 69 87 19 -
Phobius 88 107 20 -
TMHMM 88 110 23 -
ProSitePatterns 106 123 18 -
Phobius 108 118 11 -
TMHMM 117 136 20 -
Phobius 119 137 19 -
Phobius 138 142 5 -
TMHMM 142 164 23 -
PRINTS 143 162 20 1.4E-16
Phobius 143 164 22 -
ProSitePatterns 148 173 26 -
Phobius 165 175 11 -
Phobius 176 194 19 -
TMHMM 176 198 23 -
Phobius 195 199 5 -
Phobius 200 221 22 -
TMHMM 202 221 20 -
Phobius 222 280 59 -
Phobius 281 306 26 -
TMHMM 282 304 23 -
PRINTS 295 305 11 1.4E-16
Phobius 307 320 14 -
TMHMM 319 341 23 -
Phobius 321 341 21 -
Phobius 342 347 6 -
TMHMM 348 370 23 -
Phobius 348 370 23 -
Phobius 371 381 11 -
TMHMM 380 402 23 -
Phobius 382 410 29 -
PRINTS 389 410 22 1.4E-16
Phobius 411 421 11 -
PRINTS 412 424 13 1.4E-16
TMHMM 414 436 23 -
Phobius 422 442 21 -
Phobius 443 453 11 -
TMHMM 451 473 23 -
Phobius 454 472 19 -
Phobius 473 488 16 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Molecular function Transmembrane transporter activity Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0015500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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