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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0026100 |
| Transcript ID | LotjaGi5g1v0026100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 5; TAIR: AT2G42810.2 protein phosphatase 5.2; Swiss-Prot: sp|Q86UR1|NOXA1_HUMAN NADPH oxidase activator 1; TrEMBL-Plants: tr|G7I4F6|G7I4F6_MEDTR Uncharacterized protein; Found in the gene: LotjaGi5g1v0026100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:4407669..4409414) extracted from Lotus japonicus Gifu genome v1.2.
TCATGGTTAAGGAGACGAATGAGTAACCACCACGCCGCACCTTATTGAACAAAGGCATTTACAAAAAATTAATAGCATAG TTAATGATCAAAAATGCTAAATAGATGTAGAGAGAAAGCTGATTATTTTTTACTATTTATTAATTGATAATTCCTATTTG ACCTAGTTTTTTTCTTTTGCATCTTCTACCAATTCAATTCAAGATCTCTATGGGCTCGAGAGAAAGCAACAAAATCCACT GGAGCGTCTACGACGGCGTGAAGATAATCGCGGCCACGCCGGAAGCCCTGATGGCGGAGATCGACTCGGCGATCTCGAGT CTGGAGTACGCACGCGCCACCGCTATGCTCGACGGGCACGACGCCCGTTCCGCCGACGAAGCGTACAAGGCAGGCTGCGC CGCCCTGGCTGCCGGCAAGCTCGATGAGGCGCTCCGATCTTTCAACGCTTCCCTCTCGAAATGCCCTCCCGATAAGACCT CCGCTGTGGCCAAGCTTCAATCGCTGATCTCCCTCACTTCTCAGCACCTTCAATCGCCCGCTAAAGAAACCTCACTGTGA TTCCAAGCGTAAATTGTGTAATTAAGATGTAAACCGTTTGAAATGTTGCTTTGGAATGAATTATTATGCGCTGAATCTGA TTGTGAATTTGTGATCAATATCAAGTTTTTCAGCCTCACGTGGGGTTTCAGTGTGTTTTTAACAGAAAAGCCAGAATCGT CATAATTGATTTAGGATCTACCTTGTCCGCACCAAACACCACCTTAAGTTAAAACTTGTCTAAAGAGAATGTTTTTTTGA AAGTAAACTGCAAATCTATTAAATGTCAACCGGGGCGATAGAGTCATTACATTGGAATTAACCAAAGGGATAGCGACATT AGGAACCTCTTCAACCCATACTAAATCAGCATAGGCTTCAGCGTTCCTGTCCAAGAAATCCGCAACAGCATTTCTTGTGC GTCTAACAAAAGAAAGAGTTACATAATCAAAAGCATGAACTAGTAAACGACAATCCATAATAATATAGCTCAAGTATGAT CTGTCATCTTCCTTAGCCCTCAAAGCTTTAAAGAGTTGTAGACAGTGGATCTCCAAGCAAATTCTGCGAAAGCCTAAATC AATAGCCAATTTCATCATCCACCTCATGCTTAGGGCCTTCGTCAACAAAGGGAAAATAGTAGAGAGGGGGTAAGAACACA TTGCTGCCATAACTTCCCTCATACTATTCCTAGCCACCATGCCCATGCCGACCAGTTTGTCCTCAAAGAAAGAAGCATCA AAATTGTACTTGACAATACCTGGACCTGAACGCTTCCATCTCGCTGGCAATGAAGACGACGGTGCTCTCGCTTGGTCACG GACGTGGACCTGCTCCACCAGACTTCGAACACGGGCAAGAACCGCAGGTACCGCCAGCTCCCGTTGCTGGAAATTCTTCT GGTTGCGAGCTAAAGGGAATGTTGATGATTAATGCTTTGACAAATAGGAGAGGTATTGGTCCATTGAAAATTATGGTATC TTTGGATTGTTACTATTATTGAGAACTCATAATCTCAATTGTACCTCTTTTAAGAGGAAAACTGCCTACTCAAAGCGTCA AGCTACTGAGACAGAAAAATAAAAGAAGGAGGCTGCCTCCAGACACGCCGAGGAGTCCCATCATGAGTTGTTTGCTTCGC AAGACAATCAGCAGTGTACCTCTAAAAATATTGTTTCAAGGAGAGATTATTTTACACAAAACTCAC
CDS sequence (LotjaGi5g1v0026100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTCGAGAGAAAGCAACAAAATCCACTGGAGCGTCTACGACGGCGTGAAGATAATCGCGGCCACGCCGGAAGCCCT GATGGCGGAGATCGACTCGGCGATCTCGAGTCTGGAGTACGCACGCGCCACCGCTATGCTCGACGGGCACGACGCCCGTT CCGCCGACGAAGCGTACAAGGCAGGCTGCGCCGCCCTGGCTGCCGGCAAGCTCGATGAGGCGCTCCGATCTTTCAACGCT TCCCTCTCGAAATGCCCTCCCGATAAGACCTCCGCTGTGGCCAAGCTTCAATCGCTGATCTCCCTCACTTCTCAGCACCT TCAATCGCCCGCTAAAGAAACCTCACTGTGA
Protein sequence (LotjaGi5g1v0026100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSRESNKIHWSVYDGVKIIAATPEALMAEIDSAISSLEYARATAMLDGHDARSADEAYKAGCAALAAGKLDEALRSFNA SLSKCPPDKTSAVAKLQSLISLTSQHLQSPAKETSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 26 | 90 | 65 | 6.21E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0026100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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