Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0030600 |
| Transcript ID | LotjaGi5g1v0030600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mannose-P-dolichol utilization defect 1-like protein; TAIR: AT4G07390.1 Mannose-P-dolichol utilization defect 1 protein; Swiss-Prot: sp|Q8VY63|MPU12_ARATH Mannose-P-dolichol utilization defect 1 protein homolog 2; TrEMBL-Plants: tr|G7I2B1|G7I2B1_MEDTR Mannose-P-dolichol utilization defect 1-like protein; Found in the gene: LotjaGi5g1v0030600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:4913911..4919980) extracted from Lotus japonicus Gifu genome v1.2.
CAATCCTAAAATAAATCAAAATATTATGACTTCAAGGACACTTCATCGTCCGGTACCTGGCGGCAGTTGAATCTAGCAAA GAAGTTGGCGGTGAAAGAAAGGATTCAGAAGAGATCAGAGAAGAGGCGATGGAGTATCTAGGGATTGATGTCACTTGCGC CGTGAATTCTCTCCGCCATGGAAACTTCCCTGACAAGGATTGCTTGCTCCCTCTCATTTCCAAACTCCTCGGTTACGCCA TCGTCGCCGCTTCCACCACCGTCAAACTCCCTCAGGCACGCTTAATCAATCATCTGATCGCACTTCAATGTTTTTTTCTT CTAATTGTGAATTGATCAATGATGATGTTAATCTTGTGAACCGCAGATTTTGAAGATTCTGAAGCATCAGAGCGTGAGAG GTCTCAGCATGCTGTCTTTTGAGCTTGAAGTTGTTGGATATACCATTGCTCTGGCTTATTGTCTTCACAAAGGCCTTCCG TTTTCTGCTTATGGAGAATTGTTGTTCCTCTTGATTCAAGGTGCCCTAACTCTTTGTATTTGCTTATTCTTATTTTTGTT AAGCATATATTCTTCATCATTGTTTAATTCAACCAATGTATTGTAGTGACTTGTATCAGTTTTTTGTTTGATTTGTTAAT TGCTTAAAAATGGAATAAATAGATCAAATCTGTAAACCCTAGCTAGGCAGGTTCAATTGTTTTTATTGGAATGTTACACT GCTTAATAGCATAAGCTAAGTGTTGCAAAGATAAGAGTGTTGAGGTGGTTGAATAGACATAGAAGATAAGATAGGAATGG ATGTTTTTGAGAGAAAATGGGAGTATGAGTATTGCCCAATAATGACAAAATGACAGATTCGAACCATGTGAGAAAAAGAC CAATTAGAGACCTAGATAAGAATGGTTGATCATATGGAAGATAGTCCAAAAGACAAAACTAGTGTCGTAATTTAAATGGC CTTTCTGAAAAATTGGCTTTTGATATAGCACAGTAGCATTGATTGATCCATGTAGTCGTCTCTGCCTTGTGGGGAAAAGG CTTTTGATGTTGTTATTACATTGATTGAGTCATGCATGGTTCACGTATGGTACTCATAAATAAGTACTTGCCCAAGTTTC ACTATTTGAGTCTATCTTAGAACCGAATCACTGATCAAGAGATAGAAAGAAAACTGTGTTTATTGCCAAAAAATATATGT TACACCCCAGGTATCTAAGAGATATGGTTTTTCCCTCTCTTAGTTCCTCTACAAAACCAAAAGATAATCTTTCTTTCTAG TTATTTATGGCCTATCATCTCTCACTCCCTAACGTACTCCCCCAACTAACTTACTATTATCTAACTAACTCCCCAACTAA TTAAGGGGTTACCTGCCATTCTAACTAGATTTGGACCTAGGATAAACCAATTATCATGTTCATTTTTAAAACATGTTATC ACTCATTTTGTGATGCTGAGGCAGGTGAAAGGTAAATTAATAGCAGGGCTGTTATCATAACCCTTAAGATTACATTTCCA CAGTTGTTTTCTTGTCAACTTGCATTCTTATAAGTTTCCTGTTGAAAGTTACAGTTTAATAAAAGTAATTTGGAATAACT GGGAGATGTAGGCTGGAAGACCATGTAATCTGAAAGGTCTTAGCTTGTGCCATTAGTGCTAAACCTTAGCTTTTGTATGA AGATGTTTTTATTGATTATTTAATCCACATTGTTAGGAGTTTTTTCCCCTGGTTTGTTACACCAAAAGAATCAATCCATT GGCTGTGTTTTCATAAGAAACTGACCTGAGGAGAGCCATTCAACAAAAGCTAGCCCCAAGGCCTTGTAAACCCCACACCT CAATTGAATACTTCTAATGCGGGACTCGAGTCTCATACCTTACAATTGTATCCCAACATCCCACCACGCTGTGCAGCCTG GAAGACCACACGGGCTGGCTGTGCAGTGTGAATAAGCCCTTTGGCTATTATCCGGAAAATACTGCAATGTTGGCATTACC ACCCACGCCGCGCGTCTGTGGCTTAGACTTGAGAGACATTGTGGAAGACTCTGATACCAGTTGATTAGAACCTTGAGAGA ACCATAGCTTTAAAACTAGCCGTTGTAGTTGGAGAGTCCAAGACCTTATAAACACCACACTAGAATCCCATACTTCCGAA GTCCCATAAGTTGCAACTGAATCCTTAACATTTTTGAACCTTTCTTCTCTTAAACCCTCTCTGTTTCTTGGTAGAATCCT ATCAAATATTTTTTCCCTGCATGGCTGCATCATTCTGGAATGATTTTGACTAATATTTGGTGTTCTAAAATTCGTACTTG CATGAGCATCATGGGCTTTTAGATCACGCAACTTGTACATTTCTATCTTTTGTTAGGTATAGCTTTGTTGTGCTACCATT TTTTTGAAACAATCTAACTTCTCTGTTCCTCTCTATCTGTGATACAGCTTTAATATTGGTTGCCATAATCTACTACTATT CTCGACCTGTGCGTACAGCAACATGGATCCGGGCATTACTGTATCCTACTTTCTGAAGCACTTAGTTTTTATTCTTGCAT TATACAACATAATTGAGTATTCTCTACTATTTCCTTGATATATTGGATTTCAGATATTCTGCTGCAGCACCCACTATCTT AGCCGGTCAAATTGATCCTTTCCTCTTTGAGGCTTTGTATGTGAGTAACAACTTTATCCTCAACATGCATTATGCTGCTG ATATTTTTCTCTAATCGTATTTTCTTGTATGAATAATGGATAATGGGTGTTTCACCCATTATTCTTAACACCGCATTACC ATACACCCATGTAAATGTGTGTTATAGGAAGAGAAGAGAGGCATGTGATTGAAAGGGGGGGGAGGTAGGTAAGAGTAAGA TGCGAGTGTGAAAAAAGGGGTGTGAAAAATCAGGACTCCTTTTGTATCCCACCTGTCCATTCAATGATGTTGAGCATTTA TTGCCTTTATTTTATAATTACGTTGGTTATAAGGTTCTCTATATCCAATATTTCTCAATGCAAATATGATGTTTTGCAGG CATCCCAACATGCAATCTTTCTTTGTGCAAGGATCCCACAGATATGGCAAAACTTTTCTGTAAGTGGAAACATAAAGACC TATTTTGCATTCTGTTTATATTGGAGAATAACTCCTAGTTGTCATGAATTTCTTAAACATGTAATTGTAGTTCTTACATG CATATATGATATTTGGTTCTCCAGTCTAAAGGGCTATTTATTTCTCTTAGAATTTGGGTTAGGCCTAACTCTACCCCAAA AGGTAGTTAAGGGGTGAGGGTAGCTCTACCTATATATTGCTATTCTGCCTGCACTTATAAGACAAAGTAGAGCTTTTGCT GCTTGTATGTAATGACAGGCTAGAATGCTGTCAACTCCGTTGGTGTGGATATTCTAAAATTTTCAAATTATGCCTCTAGA TTTACTGCAATATTTTTGCCAGAACTTTCAATTAATGAAGCATGTTGACTCATTATTCAACATTCTTATTTGACACTGGT AACTTACTTTGGTCTGAGCAGAACAGAAGTACAGGGGAGCTCAGCTTCTTAACTTCTTTTATGAATTTTGGAGGTTCAAT GGGTAAGCCAGTTTGCCTAATAAATTTTAGGTTACAGTTTGTGTTTTATTGCATACTAATATTATTATTTGTATTTTCTG CAGTTAGGGTATTCACAACCATCCAAGAAAATGCACCAAAAAGTGGTATCCTTGCTTCATAATTTGTTTTCTTCTTCTCG TCTTCTGTTGTCATCATTGTCATTGAATATTAAATCCGTTTTTTGGTATAAATAAGTGTGCTTCTTTGTTATGAGAAGGT TAGGAACCGTTCACTTACTGCTTGTTGAAATTTTATTTGTTTTAAAGACCAAAATACATTGCAAGATGTCTGTATCTCAA TTTCAACAACAGAACATGGAAAGAATTTGATGATATTTAGAGAAAAGAAGTGTTTTTGAAACAATGTTTTCGTAACAACT TTGTAATCAGCCTAATTCATTTAATGAAATCTTATTGTTTAGTGTAAACTTTCCTCTTGAATTACAGTGACAGATAGAAC TTAATAGCTATATTTTCCTTATCAGTAATTAGCTGGAGAAATCCTGATGACATTGGGTTCTTTTTCTTAGTCTGATTTTC GTACTTCTTAGATGTTCTTTAACTTTTCCCAGCTGTATTTTTGTGATTTTGGATCTGATTTTATATTAAATCTTGGAGTT AAGCTAATAACCCAAAGGTGTTTTATTTGACACTGGAGAAAGAAGTAGCCTGATTTCCATGCTTTGATTATTTTTTTGGG GGGAGCAGTTTTCATGCTTTGATATTGGTAATATTGGTAATAGAGAAAGGTGGTAGGTATTGTTAAGTGGTTTACATCGT ACATATACAGATCTCTTGACTTGTCTAGTGAATAAGAGGGTAGAGCTCTTGAGAACTCAGGCACTCTATATACCCACTTA GCTCTTGAGAACACAGGCACTCTATATACTGACTTTTCCATAAGAAGCAGACAATCCAAATTTCATGTTTTGATGCTTAT ATATGCTTCTGTAAATGTTGTTCTGTGGTGTAAAGTTCTAATGTATGTTAAGAAAATTACGACTTTTAAGCAGTTTACTT TTTAAGTAGGTAACTACTGTTACGTTGTCTATTGCTTTGTCGAGTTGTGCTAAGTGCTAACTAGTCGTAAGAAATTTCTG GGATTTGTGTCTTCTTGTGCGTGTTTTGTTAGCTAACTGAATCTGATGAAAATTATGTCTTCCATTTCCTTGACCCAACA TTTACAAAGTTCTATGTCCATTTCAAAGTCTTCATTGACTATTTTATGTCTGCATTTCTGTTTTGCCCGTGTTAAATTTA TTCAATAGCTATTTCATATAATTGTGGTTGATTCCTTAACTCTTTTGAAGTACTATTGGGCTATGCAATTGGTGTTGCGA CAAATTTTACCATCTTAAGTCAGATAGTGTTATACCAAAAGCCTCGAGCTGAGAAAGAGAAGAAAATGGAATAGAAGAAC TGTATCGGGCTGTGTATATCTCTTCATCTTGTTCGACTCTCCACAGGTGCTGCAGCATACAGGCCACTCAGAATTTAAAG CCCTGGATTGATTCCCTGAACACTACCATCTTAAGGTAGCCAACACTGCATAAGTAACAGATTATTATTATCAATTTTAT TTTGGACACCGAGACTCTTGCGCTTGTTTGTTTTTGTTATTGTCTATCAAGCTAGAATTTAAAGGATGCATGCAGTTCTT TGTACGAATTTCTTCCTTATCCTAGATGTAAGGCTTAGTTTAACTTCTGTTTTTTCAATTATAAAGTTGAGGTAAAAAAA TTAAAGACCTCTCTGGTTTCTCACCCTATTCTTACATGTACACTACACTAATGTGCTATATCGCTTAAGGTTGCATCTTC TGGCTTCTGTTATGAGTGCGGGGGTAGCACACGAATCTATCATTTGTTTGCTGGGTTTTCTCCATTTCTGGCCAATCTAT CAGAAAGTGGTACCATGTGATATTTGTTACTCATTCAAGCTTTATTCATGGGGGAATGAATCACCTAGAGATTGTGGCAT GTGTTGTTTGAATTCAAATTGAGATCAACTTAAAAGCACATTCAAGCTAATGGAACTTAGGTGTTGCTTTTAAGTATGCT TCTTGGAATTTTTGCTTGAAGTTAACACATGTGAATTGCAAACCAAACATGTACAGTGTAGAACGCAGTGCTTGGGTTTT TGCTGGGGCAGCTTACACACCCAGAACAAGCCAAGACCATCATTTTCATGTTGCTGCCTCAGTGAATCACCTGTGCTCAT GACTTGCTTTGGATGGCTTTTTACATTTACATCACGTTCAGCACCAGTTAATATTAGTCGAGTCAATGTTTCATAGATCA TGTGTATATAAAGATGAAGGGAATAATACAAAGTTTAAAACATTTTTAGAAAATTGATAGACAAAAATAGGTACACTTAA AGAAGAAATACAAGAACGACAAAAATATGCTGTAAAATGAGTTGAAAATAAAATTTGGTTGCGGTCATTG
CDS sequence (LotjaGi5g1v0030600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGTCTTTTGAGCTTGAAGTTGTTGGATATACCATTGCTCTGGCTTATTGTCTTCACAAAGGCCTTCCGTTTTCTGC TTATGGAGAATTGTTGTTCCTCTTGATTCAAGCTTTAATATTGGTTGCCATAATCTACTACTATTCTCGACCTGTGCGTA CAGCAACATGGATCCGGGCATTACTATATTCTGCTGCAGCACCCACTATCTTAGCCGGTCAAATTGATCCTTTCCTCTTT GAGGCTTTGTATGCATCCCAACATGCAATCTTTCTTTGTGCAAGGATCCCACAGATATGGCAAAACTTTTCTAACAGAAG TACAGGGGAGCTCAGCTTCTTAACTTCTTTTATGAATTTTGGAGGTTCAATGGTTAGGGTATTCACAACCATCCAAGAAA ATGCACCAAAAAGTGTACTATTGGGCTATGCAATTGGTGTTGCGACAAATTTTACCATCTTAAGTCAGATAGTGTTATAC CAAAAGCCTCGAGCTGAGAAAGAGAAGAAAATGGAATAG
Protein sequence (LotjaGi5g1v0030600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALILVAIIYYYSRPVRTATWIRALLYSAAAPTILAGQIDPFLF EALYASQHAIFLCARIPQIWQNFSNRSTGELSFLTSFMNFGGSMVRVFTTIQENAPKSVLLGYAIGVATNFTILSQIVLY QKPRAEKEKKME
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 172 | 172 | 7.6E-52 | ||
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 3 | 167 | 165 | 1.1E-76 | ||
| PANTHER | 3 | 167 | 165 | 1.1E-76 | – | |
| TMHMM | 27 | 49 | 23 | - | – | |
| Phobius | 31 | 49 | 19 | - | – | |
| Phobius | 50 | 110 | 61 | - | – | |
| TMHMM | 56 | 75 | 20 | - | – | |
| Gene3D | 80 | 166 | 87 | 1.3E-5 | – | |
| Pfam | 88 | 138 | 51 | 9.8E-14 | ||
| SMART | 93 | 124 | 32 | 3.8E-5 | ||
| Phobius | 111 | 128 | 18 | - | – | |
| Phobius | 129 | 139 | 11 | - | – | |
| TMHMM | 138 | 160 | 23 | - | – | |
| Phobius | 140 | 160 | 21 | - | – | |
| Phobius | 161 | 172 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0030600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…