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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0032300 |
| Transcript ID | LotjaGi5g1v0032300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription initiation factor TFIID subunit 4; TAIR: AT5G43130.1 TBP-associated factor 4; Swiss-Prot: sp|F4K4L7|TAF4B_ARATH Transcription initiation factor TFIID subunit 4b; TrEMBL-Plants: tr|K7MNL8|K7MNL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0032300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:5326088..5335310) extracted from Lotus japonicus Gifu genome v1.2.
GAATCAATGCTGCAGAGAGATTGAGGAATTGAGGTGCTGCAGAGTATCCAGATTCGAACCCTACTGATACTCGCTTTGCT TGTGTGTTTGATTTCGAATCGTGCGATTTTGGAGAAACTGTTAATCATCACATCTCTTGCGTGCTTGCTCCCGTAACCTC ATCAGAATCTCTATTGGCTGGCTGGGTCAGTTGTTAATTTGTTATTACTCATGATTGTGCTTCATTCATTTTTCTAGCTA TTTTTTCTGTATCTCAATTCCAAACATACATGATTTTGATCTATAACTTTGCAACTTTGCAATGCATGATACATAGCATC GTTGTTCATTCTCGAATGTGATTTGTGTGCAGCCTTAAACAATTAGCATTTTGTTTCCTACTGAGTAATACACCAATAGT AGCTTCGTTTTGCACTCCAAGTGTTTGATAAATTTACCATCCCTGCAACCCCATCATTTGGCGTGAAGGAAGTATCTGAA CTCCTTGGTTGGATAGAGGAACCCAGATAACAAGTGCTATGGACCCATCTATAGTGAAACTTCTTGAAGATGACGAGGTT TTTTTTTTTTCCGAAAATGTGTTTATATTATTGATTAGGGGCTTTGCTTATTCTATCGCCGGGTTTGAATTGTCACAGGA TGAAACAATGCATTCGCGGGTGGATGTGGAAGCTTTCCAGGCTGCTCTAAATAGAGATATTGGAGGAGATGCATCTACTT CTCAGCTTTCTGGTTCAGATTCAGGTATCCATCCTTTTGTATTCATTATTTTCTCCCTCTCCCTCTGTCTCTCGTTCTGC CCATATATGTTTTCTTTGTTGTGTTTCTTCTCATTCCGTTCAAATTTACGGTTTTTTAAGCAAATGTTTGAGCCTGTTGT TTATGGAGTTGTCTAAATGACCTTAGAAAAAGTTTGGTTTAAATCACCCTTGTCCTAGGTGGACCAATGGACCAATGGTA TTTAACCCATACTTTGCCTAGGGCCATTTAGACAACCCCATTGTTTATTCATATTTGGATAAAAATTAAGAAGTGATCAA AAGAAATTAAGAAACTTTGTTAATTAGTGATGTTTGAACAGTGAAATATTTTGGCTGTTGATGAAAATTATTTAGTGATG TCTCAAGTTGGTTCCTCCTCCTTGTATTCTTTTGTGGTTAGATTTCTCATTCTTTTGCTTGCTGTTAATTTTCTTGCTAA ATTCTACTAAGAAACTGATATTCAGAACTGAAATTCATTCTCTATTAAGGAAACTAAATGACTGCATAAACAGAGGGAAT GTAGTACATAGATCTCTCTCAATCAGGAAAAGGAAATTAGAACTGGAGGCTATTTGAGGCGCCTACCATCTTCCTCCCAA TACCCTTACTCAGTTACTGGATACTACTCTCCTTCCCCTTTTCTGCTTCATTATTGCCTCCTCCAAACCATTTCCTCTCT TTCATTACATCACCCTTGCCACATAAGCATGGTTGTTCCCTTTTCCCACATTGTCCTCACAGCCAAGAGCTTTCATCCTA TTATTACCCAAATCTCTTCATGATATTTATCTGAATTCAGTCTGCACCACAATTCGGTGATGGGGATCAGGATCTCTAAT CCTAATTGACATAAACTCAAGTGTTGGACTATATATGATAGTAATAGAGTATATTATACCTTTGTACTACAAGTTGGTCA GTTAAGTGTTAGTATAACACTATGCACTACTATGCTAAGCACACAACTGTGACTACCTAATCATTCTAATAACATAATCA GTTTTTCTGTTATTAGAATGATTAGGTAGTTACAACAATGTGCTTAGCACAATATTTATAGTACACAGTGTAATACTAAC ACTTCACTAACCAACTTGTAGTACAAGTGTCTCTCCTTACAAGATCAGTATTACAGTAGCACGCTTTCAGAAGCAGAACA AAAAGAATATAAAATTACTGCAGAACTTTGAGGGCCTACTTCCTCCGGAATCTTACTCTTTATGCACTTCCTATCCTTCG TTCTTATATTCTCATTTCTCGCTACTGAATTCCCACCTTCTCCCAGCAATTGATTAAGCTTCAAACTATCAGCATGTTGA TTCCCCTTTATTTTCAGATATACTCTTCCTGCCCACTTGTGTTGATTATCTACTTCCCATCCCCTTCCTTGGAGCATACA CCTTGGTAATGAGTGTATGATATTCTCTACATGCGACTTGTTTATCACATCTTTCCTTCTAATTGTCCTTTCTATATGAA AGGAAGACTTTGCAGTATTCATTATTACTAAATTAGTGACATATCCTGGTCCAATTTGTATAAAGAAGCTGCCCCTTAAT GGGAAAAGTATTAAGTTTTAGTTTTAAGTGAGTGTTGGGTCATATGATATTTAATAATTGTTTGGTGATACTGATGTCTC AATTGCACATGCTTTGTTCTCCGCAGTTTTGTCTCAAGAAAACAATAATACAGTTAGTCAGTCATTACCCCAGTGGCCAA CTTCTAGCCTTGACAGCCAAACTGACAGTCAAAATCAAGAGCCTAAATCTGTAGTGCAGGAAGAGCAACCTTCTGAGATG GAACTGAAGCAACCTGTACCTCTTGTGGAACAACTGCAGCATGTTGCTTCACAGGATGTAAATAATGCTCTGTTGTCACA GAAACAATCTCAAGATGAATGTCACCAAGTGCCGACTGTACAAGTTTCCCTCCAAAATTCTCAAGCAAGTGGAAGTCAGA ATTCTGGAAAAGATCCAGTCCTTAATAATGAAGTAGTCAAAACCCATAACCCCAGTAGTGAATCTCAGTATGCCAAGTTG CAGCAGATGAGTAATCAACAGGCTACAGTCACCGAGCAGCCAAACAACCAAACTAATCGTGGTAATCAAGTACCATTTGG TCTGTTGCTACCCGTCTTGATTCCCCAACTTGCCAAAGACAAAGCCATGCAACTTCAAACTCTATTTGCTAAACTGAAGG TGGGTTTCCCAGACCAATCACACTAGCAGGTCCTTTGATCCCCCCCCCCCCCACACTAAACTTTGATAACTGATAAGTTT TGATCTTTTTTGTGATAGGCTAAAACCAACTTATGAACTGATATCTCATTCTACTAATTTTCAGTTTGGTCCATTTTTTT CTTTTGGTTTTAGAAAGATGAAATACAGAAAAGCGATTTTGTGCGGGTGATGAAGAATATTGTTGGGGAGCAGATGCTTA GACTAGCATTAGTAAAAGTGCAATCCCAGGTAGGGAGATAACATAATTTCTGTCGTACTATGGATATTTTTATTAAGCCA GTTAAATATTGATGTCATGGTGTTTCCTGGTGTAAATGGAAACACATGGTCCTGCTAAAATTTTCATCTTTTTCTACTGT TAAAGACAAGGTCAAACCAGGAACCTGCTGGGCAGCAGCACCCTGTAAGGACACAAACTGTTAGTTCAGGGGTAAGGCAT GTGAATGATCCCCATGCTTCAGCACAGATGCATCAGAGAAGCATGGCTGCTGACCAAAATCGAATGACGTCCTCAGCGGT CCAAATTATGGAGAGAAATGCTAGGAAATCTCAGGAATTGGATGTTAAAATAGAATCTCAAGGATTGCAATCAAGCCAAT TGCCATTTTCACGTAATGCTGTTAGCCAAGAAACAGAAAGATCATCAGTTCACATACAAGGGCTTAATAAGCAGCAGCAA CAACATATACACTTTCCATCAGCATATGGAAGTAGTAATGATAGTTATAACCCTTTTTCTGGCGCAAGCAGTGGTTCCAA TTCATTTATTAAACCACAGCAACAAGATTCACATATGAGTCAAATTCCACATCAAAGCATTAGTTCAAATCACTTAGGTG GGACAACACATATGATAGGTATACCAAAGCTTGAACAGCAGAATTCTTTAAATGACTCCAAGAAACTAGGTGGATCTGTG TGTGCTGCTGTAAACAGAGCAGCATCTCAGCAAACTTCAAATGCCTGGCAACCACCAACGAACAAAGAACAAAATTTGGG CTTTATGTCGTCTGCTTCTTATGTCAAAAAGGAGCCAGGTGACTTGTCTACAGAGCAGCAACATAGGCATAATTTGTCTA AATTGCATGGACTGCCTTCTGTTAATTCTGCACAGGTTGAAAAGGGTGGTGCTAATCAAAGGACTGTAATGGACGAGTTT TCAAGAGGTCTTCCTGCATCAACAAGCACGCCTCCTACAACTTCTGTAATGACCCAACTAGACCCTAATGTCTCTGTAAG TTTAAGACTGACATACATGATATTGTCTAAGGATACCATGGCCAAATTTTTGCGGATCAATTAGTGCTAAATATGTTTCT GTTTTCATGTGCCGTTTGCATCCTTTTAGTACTATGTTATCTTTTATTTATACTACGAAATACAAGCTATGTCAGTGATA TGTATTCAGGAAATTTCATCATTTTTGTTAAATTGTTTAATGCAAAGAATCTTTTTCTCCAATAATTCTGTGATACATTT TGTAATTGAGTATGCAAATATTTTTTCTCAGGTAGCATGTTGACTCGACTTTTATGTAGAACTTAGTATTCAAGAACAGA TAAGAACCATTCTTTTGTTGTGTGATATAGTTACCATAATTAGTAGAATCTGATGTCATAGTTTCTATAATTAGGAAAGA TTTGATTTTGGTTTTATTTCTATAGATTTCATTTTCCTTGTTTTCCCTGAATTAGGTTTGTTATAGTCTATATATTGTAA TCACCAATTGCATTTTACCAAGCAATAAAATTCAAAATTATTGTTTTTCCACTTTTTTCAAGTTTTAATCAGAACCCCTG ATCCAGGGGCTCTGATTCTTTGGGGCTAACCCAAGATTGCTGTCGTGTGTTCAGTGCCTTTTTTGCACTGTTTCTTTTTC ACTCATGGCATGCACAATTTTATAAATCTCTTCTTTTCTCTTCTTTGGCTAGCTTTTGGGGTAGATTTTATTGGACCTAG ATGCGTTTATTGGACCACCCATAAATGGGCCACCTGTAGATGTTCAGTCCTACAAACTTCCCTCTTCAGACTTCAAACCC TAGGCATGAGGGAGGTGTGTTGGGAGGTCCCGCATTGACTAGAGATATGGCCAAATAAGCTATTATAAATGGTAGAACAA TCTTCACCTCTGAGTTAGCTTTTGGGGTAGAGCCAGACCTAACCTGAATTCTACAGATGTATTATAAGTTGCAAAGAAGA ATAACAAGCACATAAGGCTGTGCTTATTTTTTAATGTCTTTGGGATTCTACTTTTTATTAAACAGAATCTGCTATCAGAA AATATGAACTTCAAATCTTGCTTTTTCTTTGTATTTTGTTTTCTTAAATACCAAAATATCATTATGTTTACCGACCTCAT GTATATAATGATGTCTTCAAATTTGTTGATGCTCTATTTTCTATAGCCCCATTTTTTAATTTTATCTGTTAAACACCCAG ACCCCATCGAACGTATCTGGAGTTATTGCAAGGACACCTCTTAAAAAGCCTCCTCTTGCCCAGAAGAAACAACTTGACGT GCCTGGTTCCTCACCTCCTCCGCCAAGGTGACGTTTATTACTTTATTCGATAAGTATTCACTTGTTTTTTGGGTTAATTC TTAGTTTCTAACAGACTTTGGTGTATTCATAATGTGCCTGCTACCCATTTTACAGTAAAAAACAAAAATCGTCTGGGGGA TCTGTAGAACAAAGCATTGAACAGCTTAATGACGTGACTGCTGTCAGTGGAGTTGATCTTAGGGTATGATACTTTGTCAT GTTGACCTTAGTCAGATAGCTCAATAAGTAGGGAATTCAAAATCTGAAATTTGCAATATTTCCTTGCCAGGAAGAGGAAG AGCAGCTATTTTCTGGGCAGAAAGAGGATAGTCGAGTTTCAGAAGCATCTCGAAAAGCTGTGCAAGAAGAGGAGGAAAGG CTGATTTTGCAGAAAGCTCCATTGCAAAAGAAGTTGATTGACATTAGTTAGTTTCGTTTTCATGTCATCCCGACGTCCAT CTGTTTTTGTTATTTTCTTTTGAGCTTATACATGCACTAGGTCCACAGAACCTTATAGCTGTTTTTTTCCTGGCAGTGGC CAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAGATGCTTGTCACTGGTAAGATTCAAGCAACTTTTCACTTTTC GTTGCAGTAGGCTTGCTTTTAATCTTTTGGCTCTAAAATAAATGTCCAGTGTGTAGAGGAAAGAATGCGTGGACTCATAA GTAACCTGATTAGACTGTCAAAACAGGTCAGTTATTTGCTATCGCTGCTTGCATGGATAGTCTTTCATAACTGTATAGAA TTTCTTACTTGGGAGAATTATCCTACTAGCGGGTTGATGTTGAGAAGACAAGACATCGGACAATTGTCACCTCAGATGTT GGGCAGCAAATACTGACAATAAATAGGAAAGTAAGGGAAGAGTGGGAGAAAAATCTGGCAGAAGAGAAGCTTCGGAAACT AAATGATGTGAGTTCCAATTTTTTTATTTTTATGCTGAGTTAATAACAAGATAAAAGCCTTAAAAAAACATGCACACTCC CAATGCATGCATGTATATTGTGTATTTGCATTTGAAACCTGTGAGCTTATCATTTAAAATGGTATTTTTTAAATATAGGT TGAGAGCAATGCTGGAGATGATGGTGATGCGGAGAAGGATGAGAGTCGTTCTAAATCGACAAAGGTATTAATGTCTCATT CTCATATTTCACCATTACAACATTGGGAATCTTTTATTTATCTCACGCTGCAGGTGAACAAGGAAGAGGATGGCAAGCTG AGGACGAATGCTGCAAATGTTGCTGCCCGCGCTGCTGTTGGGGGGGATGATATGCTCTCAAAGTGGCAACTTCTGGCTGA GCAAGCCAGGCAGAAACGTGAAGAGGCGATGGACACGTCATCCGGTTCGCAGCCATCAAATGATGTGAACCCGAAATCCT TATCAACATCTGGAAGAGGTACAAAGGATGACCAAGAAGGGGAGAGAAAAGGTTCTACTGCTTTTCTTGCAGCTTCAGGT GAGTTTATTTAAAGCTGTGTTTTATCTTTCAGTTATCAAAAACATAAGCTGGAAGATAGCAGTCAATTTTAGATATTAAT ATTGACCAAACTTAGATCCATGATGCTATATCTTAATTTACGGATAAAAAGATTAAGATAGGTAATAAATGGAAGTGAAC TTGACCCTTTTATCTGCAAGGCTTTTATTCTTGTTGTAAAATGTTTTTATAAATATCTAAATGTACACCATCCTTTTCTA ATTTCTTTGGGGCTTTATCATGCTCCTGAGCTCCTGCCTCGGCCACTATCCATTGTCCTCTTGTATAAAGTTTGACTATA TATGGTAAATGTTGCCAACTAAATGGTTTAAAAGAACTTCACGGTGTTGATAGGTTTGAATCAAGTTATTAGTGCCGCTT TCACTTTTGTGCTGCTTTTTCATGGCTGTTTTGCTCCTTGCATTCTTCTAATAGGTTCTGCTGGAAAACATGGGAGAAAT CATGCTGTTGCATCTCAAGCTAGGGTAGCTCGAAGCATCTCTGTGAAGGATGTAATTGCAGTCTTAGAGAGGGAACCCCA GATGTCTAAATCACCACTCGTACATCGCTTGTATGAAAGAATTCATTCTGATGCTCCAGCTGAATAACGATAAATGAAGT ACCTAGCAGGTGATATTTTTTTTTTTTTAAATTTTGTTGTTGAGTTTATTATTATCTTATGCTTATCAACTAAATTGAAA AGTTTCCTCAAGTCGGATACCAACTGTGTTGTACACCTGACTACTTATAGCCCCCGATAGTTTACCATTTAAATTTGATT TTCTCCTGTATTCACAGTTGTCTTGTAAAAAGTTTTCCTGGTAGATTTTAGCTTGTATGGTTCGAAAACGATTATCAAGT TCCTGCATGTTTGGAAACCCTTCTTTGATTGATTTTGAAGCCATAATCAATTATCAGGAACAGTTTCTGTGAGTAGCGTC GGAGTTTCTGATGAATGAGAAACCGATTCAAACATGCTCTATTGGTTGCTGTTGATTCAGTGAATCGATTCTGAACTCGG CTAGTTGATCCTGTGTGTGTGTGTGTGTTAGTGTGTGTGAGAGAGATAGAAAATACCCACTTCCATAGGTTAAAATTAAC ACCCAGGAAGAAACTAATGGAAATTGAAGTTCCTGATAACATCATACAGGTACTTCCTCCCATGCATGACACTTTGACCT GACCATAAGTTAGCTGAGATGAAACAAAGGAATGGGGGCTTGCACGTATGCTTAGTTATGTTTTTAATCAACAGTATATT ATGGTGTACCCACTATAGAAGATTTAACCCTTAATTTAATTCTTTTAAGCTGTGCATTATGAATATAAGAATAACTGTTA TTTGAAAAATTGATTATTTAGAGTGCAATAAAATATATGCACATGTTTGGAAAAAAAAATTTTTTTTTTATCTATTAGTA GTGTTTTTATTAACGGTTGTAAATTTCTACCTTATAATTTAAAGTACTCCTCTCACCTTAATAGGAGCCAAATTTTAACT GCATTCAAGAATTTATTGCAAAGGTTTGTTGTGTCTATCCTATGCTGCAATTCATGACTTGGATCCGACTGGGAAGGCCA CGCAATCTAAGTGAAGCCTATCCGATTGTCATGTTCTACGAAAAGAGTTCTATGTCTGCATGTGAGCCTCCTTTAAAATC CATTCTTGACTTTTATTACACATAAATTTGTGTTTTTATTACAATTTAAACCGTTTAATGGAGTCAGATTCTTATCTGAA ATATCAACTCATTATTTGTTTTTGTTTTCTCAACGACAAATTAAACATAATAGATTGAAACTCAAAATTGGGATGACTTT CCACGTGGTAACGGGCAATACAACAAACTAGAAAATAGTTAAAATCACATGTCTGCGTTAGACTCGCACATTTTTCTTGT TTTTTTTTTACAATAACAACGAAGTGTTTTTGGCGTTTTTTTTAGTACAAAACTAATATCTAGTCAGGAACAGCAATCAA GCAAAAGTTCCTATTTCAAGTGACAAATTTAAAATATAAATGTTCAGTAATACTCTAAGAATTTATCCATAAGTAAAATT GATGTTTACCGTGATCAATTACGACCACTATTTTCTTTTTTGAGAACATAACATTTCTCTACCACTCAAGAGATTGACTT ATTTTATAACATTAAGATAGAAG
CDS sequence (LotjaGi5g1v0032300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCCATCTATAGTGAAACTTCTTGAAGATGACGAGGATGAAACAATGCATTCGCGGGTGGATGTGGAAGCTTTCCA GGCTGCTCTAAATAGAGATATTGGAGGAGATGCATCTACTTCTCAGCTTTCTGGTTCAGATTCAGTTTTGTCTCAAGAAA ACAATAATACAGTTAGTCAGTCATTACCCCAGTGGCCAACTTCTAGCCTTGACAGCCAAACTGACAGTCAAAATCAAGAG CCTAAATCTGTAGTGCAGGAAGAGCAACCTTCTGAGATGGAACTGAAGCAACCTGTACCTCTTGTGGAACAACTGCAGCA TGTTGCTTCACAGGATGTAAATAATGCTCTGTTGTCACAGAAACAATCTCAAGATGAATGTCACCAAGTGCCGACTGTAC AAGTTTCCCTCCAAAATTCTCAAGCAAGTGGAAGTCAGAATTCTGGAAAAGATCCAGTCCTTAATAATGAAGTAGTCAAA ACCCATAACCCCAGTAGTGAATCTCAGTATGCCAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCACCGAGCAGCC AAACAACCAAACTAATCGTGGTAATCAAGTACCATTTGGTCTGTTGCTACCCGTCTTGATTCCCCAACTTGCCAAAGACA AAGCCATGCAACTTCAAACTCTATTTGCTAAACTGAAGAAAGATGAAATACAGAAAAGCGATTTTGTGCGGGTGATGAAG AATATTGTTGGGGAGCAGATGCTTAGACTAGCATTAGTAAAAGTGCAATCCCAGACAAGGTCAAACCAGGAACCTGCTGG GCAGCAGCACCCTGTAAGGACACAAACTGTTAGTTCAGGGGTAAGGCATGTGAATGATCCCCATGCTTCAGCACAGATGC ATCAGAGAAGCATGGCTGCTGACCAAAATCGAATGACGTCCTCAGCGGTCCAAATTATGGAGAGAAATGCTAGGAAATCT CAGGAATTGGATGTTAAAATAGAATCTCAAGGATTGCAATCAAGCCAATTGCCATTTTCACGTAATGCTGTTAGCCAAGA AACAGAAAGATCATCAGTTCACATACAAGGGCTTAATAAGCAGCAGCAACAACATATACACTTTCCATCAGCATATGGAA GTAGTAATGATAGTTATAACCCTTTTTCTGGCGCAAGCAGTGGTTCCAATTCATTTATTAAACCACAGCAACAAGATTCA CATATGAGTCAAATTCCACATCAAAGCATTAGTTCAAATCACTTAGGTGGGACAACACATATGATAGGTATACCAAAGCT TGAACAGCAGAATTCTTTAAATGACTCCAAGAAACTAGGTGGATCTGTGTGTGCTGCTGTAAACAGAGCAGCATCTCAGC AAACTTCAAATGCCTGGCAACCACCAACGAACAAAGAACAAAATTTGGGCTTTATGTCGTCTGCTTCTTATGTCAAAAAG GAGCCAGGTGACTTGTCTACAGAGCAGCAACATAGGCATAATTTGTCTAAATTGCATGGACTGCCTTCTGTTAATTCTGC ACAGGTTGAAAAGGGTGGTGCTAATCAAAGGACTGTAATGGACGAGTTTTCAAGAGGTCTTCCTGCATCAACAAGCACGC CTCCTACAACTTCTGTAATGACCCAACTAGACCCTAATGTCTCTACCCCATCGAACGTATCTGGAGTTATTGCAAGGACA CCTCTTAAAAAGCCTCCTCTTGCCCAGAAGAAACAACTTGACGTGCCTGGTTCCTCACCTCCTCCGCCAAGTAAAAAACA AAAATCGTCTGGGGGATCTGTAGAACAAAGCATTGAACAGCTTAATGACGTGACTGCTGTCAGTGGAGTTGATCTTAGGG AAGAGGAAGAGCAGCTATTTTCTGGGCAGAAAGAGGATAGTCGAGTTTCAGAAGCATCTCGAAAAGCTGTGCAAGAAGAG GAGGAAAGGCTGATTTTGCAGAAAGCTCCATTGCAAAAGAAGTTGATTGACATTATGGCCAAGTGTGGCTTGAAGGGTAT GAGCAATGATGTGGAGAGATGCTTGTCACTGTGTGTAGAGGAAAGAATGCGTGGACTCATAAGTAACCTGATTAGACTGT CAAAACAGCGGGTTGATGTTGAGAAGACAAGACATCGGACAATTGTCACCTCAGATGTTGGGCAGCAAATACTGACAATA AATAGGAAAGTAAGGGAAGAGTGGGAGAAAAATCTGGCAGAAGAGAAGCTTCGGAAACTAAATGATGTTGAGAGCAATGC TGGAGATGATGGTGATGCGGAGAAGGATGAGAGTCGTTCTAAATCGACAAAGGTGAACAAGGAAGAGGATGGCAAGCTGA GGACGAATGCTGCAAATGTTGCTGCCCGCGCTGCTGTTGGGGGGGATGATATGCTCTCAAAGTGGCAACTTCTGGCTGAG CAAGCCAGGCAGAAACGTGAAGAGGCGATGGACACGTCATCCGGTTCGCAGCCATCAAATGATGTGAACCCGAAATCCTT ATCAACATCTGGAAGAGGTACAAAGGATGACCAAGAAGGGGAGAGAAAAGGTTCTACTGCTTTTCTTGCAGCTTCAGGTT CTGCTGGAAAACATGGGAGAAATCATGCTGTTGCATCTCAAGCTAGGGTAGCTCGAAGCATCTCTGTGAAGGATGTAATT GCAGTCTTAGAGAGGGAACCCCAGATGTCTAAATCACCACTCGTACATCGCTTGTATGAAAGAATTCATTCTGATGCTCC AGCTGAATAA
Protein sequence (LotjaGi5g1v0032300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPSIVKLLEDDEDETMHSRVDVEAFQAALNRDIGGDASTSQLSGSDSVLSQENNNTVSQSLPQWPTSSLDSQTDSQNQE PKSVVQEEQPSEMELKQPVPLVEQLQHVASQDVNNALLSQKQSQDECHQVPTVQVSLQNSQASGSQNSGKDPVLNNEVVK THNPSSESQYAKLQQMSNQQATVTEQPNNQTNRGNQVPFGLLLPVLIPQLAKDKAMQLQTLFAKLKKDEIQKSDFVRVMK NIVGEQMLRLALVKVQSQTRSNQEPAGQQHPVRTQTVSSGVRHVNDPHASAQMHQRSMAADQNRMTSSAVQIMERNARKS QELDVKIESQGLQSSQLPFSRNAVSQETERSSVHIQGLNKQQQQHIHFPSAYGSSNDSYNPFSGASSGSNSFIKPQQQDS HMSQIPHQSISSNHLGGTTHMIGIPKLEQQNSLNDSKKLGGSVCAAVNRAASQQTSNAWQPPTNKEQNLGFMSSASYVKK EPGDLSTEQQHRHNLSKLHGLPSVNSAQVEKGGANQRTVMDEFSRGLPASTSTPPTTSVMTQLDPNVSTPSNVSGVIART PLKKPPLAQKKQLDVPGSSPPPPSKKQKSSGGSVEQSIEQLNDVTAVSGVDLREEEEQLFSGQKEDSRVSEASRKAVQEE EERLILQKAPLQKKLIDIMAKCGLKGMSNDVERCLSLCVEERMRGLISNLIRLSKQRVDVEKTRHRTIVTSDVGQQILTI NRKVREEWEKNLAEEKLRKLNDVESNAGDDGDAEKDESRSKSTKVNKEEDGKLRTNAANVAARAAVGGDDMLSKWQLLAE QARQKREEAMDTSSGSQPSNDVNPKSLSTSGRGTKDDQEGERKGSTAFLAASGSAGKHGRNHAVASQARVARSISVKDVI AVLEREPQMSKSPLVHRLYERIHSDAPAE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 903 | 903 | 8.2E-216 | – | |
| PANTHER | 1 | 903 | 903 | 8.2E-216 | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| MobiDBLite | 35 | 96 | 62 | - | – | |
| MobiDBLite | 35 | 86 | 52 | - | – | |
| MobiDBLite | 161 | 195 | 35 | - | – | |
| ProSiteProfiles | 190 | 261 | 72 | 27.014 | – | |
| Pfam | 195 | 256 | 62 | 4.5E-17 | ||
| MobiDBLite | 259 | 280 | 22 | - | – | |
| MobiDBLite | 329 | 420 | 92 | - | – | |
| MobiDBLite | 525 | 556 | 32 | - | – | |
| MobiDBLite | 525 | 596 | 72 | - | – | |
| CDD | 596 | 897 | 302 | 1.7188E-44 | ||
| Pfam | 601 | 897 | 297 | 9.2E-79 | ||
| MobiDBLite | 743 | 776 | 34 | - | – | |
| MobiDBLite | 743 | 774 | 32 | - | – | |
| Coils | 792 | 812 | 21 | - | – | |
| MobiDBLite | 802 | 869 | 68 | - | – | |
| MobiDBLite | 811 | 831 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Transcription factor TFIID complex | A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters. | ||
| Biological process | DNA-templated transcription, initiation | Any process involved in the assembly of the RNA polymerase preinitiation complex (PIC) at the core promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. The initiation phase ends just before and does not include promoter clearance, or release, which is the transition between the initiation and elongation phases of transcription. |
Expression pattern of LotjaGi5g1v0032300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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