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GO:0005669

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Transcription factor TFIID complex
Full defintion A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters.
Subterm of

Relationships

The relationship of GO:0005669 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah
ISBN

· ISBN: 0879695501

, · pages

Associated Lotus transcripts 26

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0019949.1
– Transcription initiation factor TFIID subunit [Medicago truncatula] gi|357462725|ref|XP_003601644.1|
GO terms
2
Lj1g3v1720150.1
– PREDICTED: serine-rich adhesin for platelets-like [Cicer arietinum] gi|502162858|ref|XP_004512638.1|
GO terms
2
Lj3g3v2613490.1
– Transcription initiation factor TFIID subunit [Medicago truncatula] gi|357513949|ref|XP_003627263.1|
GO terms
2
Lj3g3v2613490.2
– Transcription initiation factor TFIID subunit [Medicago truncatula] gi|357513949|ref|XP_003627263.1|
GO terms
2
Lj5g3v0308460.1
– PREDICTED: serine-rich adhesin for platelets-like [Cicer arietinum] gi|502162858|ref|XP_004512638.1|
GO terms
2
LotjaGi1g1v0360700.1
– Transcription initiation factor TFIID subunit 4; TAIR: AT5G43130.1 TBP-associated factor 4; Swiss-Prot: sp|F4K4L7|TAF4B_ARATH Transcription initiation factor TFIID subunit 4b; TrEMBL-Plants: tr|I1K853|I1K853_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0360700
GO terms
2
LotjaGi1g1v0514400.1
– Transcription initiation factor TFIID subunit 8; TAIR: AT4G34340.1 TBP-associated factor 8; Swiss-Prot: sp|Q9SYZ9|TAF8_ARATH Transcription initiation factor TFIID subunit 8; TrEMBL-Plants: tr|I1KWG4|I1KWG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0514400
GO terms
1
LotjaGi1g1v0514400.2
– Transcription initiation factor TFIID subunit 8; TAIR: AT4G34340.1 TBP-associated factor 8; Swiss-Prot: sp|Q9SYZ9|TAF8_ARATH Transcription initiation factor TFIID subunit 8; TrEMBL-Plants: tr|I1KWG4|I1KWG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0514400
GO terms
1
LotjaGi1g1v0539400.1
– Transcription initiation factor TFIID subunit 6; TAIR: AT1G04950.1 TATA BOX ASSOCIATED FACTOR II 59; Swiss-Prot: sp|Q9MAU3|TAF6_ARATH Transcription initiation factor TFIID subunit 6; TrEMBL-Plants: tr|A0A0L9UX09|A0A0L9UX09_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0539400
GO terms
5
LotjaGi3g1v0415600.1
– Transcription initiation factor TFIID subunit 12; TAIR: AT1G17440.1 Transcription initiation factor TFIID subunit A; Swiss-Prot: sp|Q940A7|TA12B_ARATH Transcription initiation factor TFIID subunit 12b; TrEMBL-Plants: tr|V7ATA8|V7ATA8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0415600
GO terms
4
LotjaGi4g1v0263300_LC.1
– Transcription initiation factor TFIID subunit 2; TAIR: AT1G73960.1 TBP-associated factor 2; Swiss-Prot: sp|Q8LPF0|TAF2_ARATH Transcription initiation factor TFIID subunit 2; TrEMBL-Plants: tr|A0A1J7I063|A0A1J7I063_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263300_LC
GO terms
1
LotjaGi4g1v0263600.1
– Transcription initiation factor TFIID subunit 2; TAIR: AT1G73960.1 TBP-associated factor 2; Swiss-Prot: sp|Q8LPF0|TAF2_ARATH Transcription initiation factor TFIID subunit 2; TrEMBL-Plants: tr|K7KNH3|K7KNH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0263600
GO terms
1
LotjaGi4g1v0263600.2
– Transcription initiation factor TFIID subunit 2; TAIR: AT1G73960.1 TBP-associated factor 2; Swiss-Prot: sp|Q8LPF0|TAF2_ARATH Transcription initiation factor TFIID subunit 2; TrEMBL-Plants: tr|V7CAF2|V7CAF2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0263600
GO terms
1
LotjaGi5g1v0032300.1
– Transcription initiation factor TFIID subunit 4; TAIR: AT5G43130.1 TBP-associated factor 4; Swiss-Prot: sp|F4K4L7|TAF4B_ARATH Transcription initiation factor TFIID subunit 4b; TrEMBL-Plants: tr|K7MNL8|K7MNL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0032300
GO terms
2
LotjaGi5g1v0081700.1
– Transcription initiation factor TFIID subunit 8; TAIR: AT4G34340.1 TBP-associated factor 8; Swiss-Prot: sp|Q9SYZ9|TAF8_ARATH Transcription initiation factor TFIID subunit 8; TrEMBL-Plants: tr|K7LZR0|K7LZR0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0081700
GO terms
1
LotjaGi5g1v0081700.2
– Transcription initiation factor TFIID subunit 8; TAIR: AT4G34340.1 TBP-associated factor 8; Swiss-Prot: sp|Q9SYZ9|TAF8_ARATH Transcription initiation factor TFIID subunit 8; TrEMBL-Plants: tr|K7LZR0|K7LZR0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0081700
GO terms
1
LotjaGi5g1v0094200.1
– Transcription initiation factor TFIID subunit 12; TAIR: AT3G10070.1 TBP-associated factor 12; Swiss-Prot: sp|Q9SR71|TAF12_ARATH Transcription initiation factor TFIID subunit 12; TrEMBL-Plants: tr|A0A151RJE5|A0A151RJE5_CAJCA Transcription initiation factor TFIID subunit 12; Found in the gene: LotjaGi5g1v0094200
GO terms
4
LotjaGi5g1v0335000.1
– Transcription initiation factor TFIID subunit 8; TAIR: AT1G31240.1 Bromodomain transcription factor; Swiss-Prot: sp|Q9SYZ9|TAF8_ARATH Transcription initiation factor TFIID subunit 8; TrEMBL-Plants: tr|G7J7B1|G7J7B1_MEDTR Bromodomain associated protein; Found in the gene: LotjaGi5g1v0335000
GO terms
1
LotjaGi5g1v0335000.2
– Transcription initiation factor TFIID subunit 8; TAIR: AT1G31240.1 Bromodomain transcription factor; Swiss-Prot: sp|Q9SYZ9|TAF8_ARATH Transcription initiation factor TFIID subunit 8; TrEMBL-Plants: tr|G7J7B1|G7J7B1_MEDTR Bromodomain associated protein; Found in the gene: LotjaGi5g1v0335000
GO terms
1
LotjaGi6g1v0035900.1
– Transcription initiation factor TFIID subunit 7; TAIR: AT1G55300.2 TBP-associated factor 7; Swiss-Prot: sp|B9DG24|TAF7_ARATH Transcription initiation factor TFIID subunit 7; TrEMBL-Plants: tr|K7M6Z5|K7M6Z5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0035900
GO terms
2
LotjaGi6g1v0035900.2
– Transcription initiation factor TFIID subunit 7; TAIR: AT1G55300.1 TBP-associated factor 7; Swiss-Prot: sp|B9DG24|TAF7_ARATH Transcription initiation factor TFIID subunit 7; TrEMBL-Plants: tr|I1KFI5|I1KFI5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0035900
GO terms
2
LotjaGi6g1v0063100_LC.1
– Transcription initiation factor TFIID subunit 2; TAIR: AT1G73960.1 TBP-associated factor 2; Swiss-Prot: sp|Q8LPF0|TAF2_ARATH Transcription initiation factor TFIID subunit 2; TrEMBL-Plants: tr|K7KNH3|K7KNH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0063100_LC
GO terms
1
LotjaGi6g1v0153200.1
– Transcription initiation factor TFIID subunit 6; TAIR: AT1G04950.1 TATA BOX ASSOCIATED FACTOR II 59; Swiss-Prot: sp|Q9MAU3|TAF6_ARATH Transcription initiation factor TFIID subunit 6; TrEMBL-Plants: tr|A0A151SBK3|A0A151SBK3_CAJCA Transcription initiation factor TFIID subunit 6; Found in the gene: LotjaGi6g1v0153200
GO terms
5
LotjaGi6g1v0153200.2
– Transcription initiation factor TFIID subunit 6; TAIR: AT1G04950.1 TATA BOX ASSOCIATED FACTOR II 59; Swiss-Prot: sp|Q9MAU3|TAF6_ARATH Transcription initiation factor TFIID subunit 6; TrEMBL-Plants: tr|A0A151SBK3|A0A151SBK3_CAJCA Transcription initiation factor TFIID subunit 6; Found in the gene: LotjaGi6g1v0153200
GO terms
5
LotjaGi6g1v0153200.3
– Transcription initiation factor TFIID subunit 6; TAIR: AT1G04950.1 TATA BOX ASSOCIATED FACTOR II 59; Swiss-Prot: sp|Q9MAU3|TAF6_ARATH Transcription initiation factor TFIID subunit 6; TrEMBL-Plants: tr|A0A151SBK3|A0A151SBK3_CAJCA Transcription initiation factor TFIID subunit 6; Found in the gene: LotjaGi6g1v0153200
GO terms
5
LotjaGi6g1v0153200.4
– Transcription initiation factor TFIID subunit 6; TAIR: AT1G04950.1 TATA BOX ASSOCIATED FACTOR II 59; Swiss-Prot: sp|Q9MAU3|TAF6_ARATH Transcription initiation factor TFIID subunit 6; TrEMBL-Plants: tr|A0A151SBK3|A0A151SBK3_CAJCA Transcription initiation factor TFIID subunit 6; Found in the gene: LotjaGi6g1v0153200
GO terms
5

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0046695
Cellular component SLIK (SAGA-like) complex 1 3.85