Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0034000 |
| Transcript ID | LotjaGi5g1v0034000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component 7; TAIR: AT4G31540.1 exocyst subunit exo70 family protein G1; Swiss-Prot: sp|Q9LZD3|E70A1_ARATH Exocyst complex component EXO70A1; TrEMBL-Plants: tr|G7IBC1|G7IBC1_MEDTR Exocyst subunit exo70 family protein; Found in the gene: LotjaGi5g1v0034000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:5559791..5565287) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGTGCAATGAGGTCGTATAAAAAATATATTCACACCTCACTCAATGTTTTTTTTTCCTCAGATATAAATAAGATAGT GGCATTTCCTCTGGTACAAGCAAAATAATTCTGGGTTAAGTACAGGAGTGACATGTACCAGTAGGAAAATTACACTTGGA TTTATTATTCATAATTTTGTGGACTTCTTAAAACTCTAAATCAACCTGTAGGTTTATCATAATTCTAAATTTACCCCATA ACCTTCACTTGCATGCCTCTTCCACCCTCTTCTCCTCCCAACACCTTCCTTCGAACTCTGGCCACCGAACACTGGTTGGC TTTGTAGATCTGCTTTGCTTGGAAAGGAGGGAGAGTGTGGGTGGCTCCTGGCCTCTGGCAGGTTGAGGATGGCGGTCGGT TGGTCGGCGGCGCGGGTTAAGTCAGCGACGGTGCGGCCTTGAAGGGACACCCAAGCACGACGACGCGGGCGTGGTCGCTG AGGACGCGGCAGGGCACGGTGGCGGCGCAAAGGAGGGCGCGACAACGGTGGTTGAGCGGCGGCGGCGGCGGCTGCACTAG GGAGGCAGTGGAGGCGACTGCTGTTTGGGAGAGGAAGGAGATGACGAAAAAGTAAAAATTAAAAAATTAGGTCAAAAAGG GAAGGATCTGGAGGTGGTTTGGGGGTTGCTGTTGATGATTTATTGGGGTTGGAGATCTGGGAATGACTATGTTTTACGTA CTTATTCCCTTGGTGCAGAATTCTGATCTGGGTAGCTATATCTACATTTGTGGTTTTTTTATTGTTACATTAGTAAGGTA TCAGACTTCGTCCGTTTTTGTGGGTAGCTAGATCTTAATTTCTCCATTTTTCTGATCTGTTGTAAATTGTTCTCAAACTT TGTTCTCCATCTTTCAAATAATAATTTTGTTTTGTTGTGAAAAAAAAAGCTTTCTGGTATTATATAGGTTTATTTATGGT TTTGAGAAATTGGGTTTTGGTCTTGCTAGAGAATGTACGAGAAAAAAAAATAGGTGTTGTGATTTTGAGTTGAAGGTAAT TTTGATTTCTAAGAGAAAAGGGAAAGAGGATTAGATGATGAAGCAGAAGGAGAATGATGCAAATCAAAATGAAGCACAAA GGATGATGATGAAGAAGATTAAAGGGGATGGAGAAGATGAAATTCACAATGATTTCTGAGTTTGAAGATCTAAGTTCTTC TGGATTTTTGAAGACCAGGGTTCTTCGGGTAGGAGGAGGAGACTGAATTGAGTCAATTTTGATATGGGTTTATCAACGAA TCCGCAGAAGAGATATACAGTGGGATTTATGATCAAAAGTAATGATCAAATTTGTGTATCTGAAACTTTGTTCATTTTGT TGATGGAATATTTCTCCACTCCCTTTTCCATGCTATCTTTTGGTATTCAATGTTATTAGTTTTTCTTCAATAATTATTAA AAAATGTGAGGGCATATTTAGTAAGTTAAAATTCAGTTGGGTTCATAATGTAAATAGTGTAAAAAAATCTAGTCAGCACT TGTATATTAAGTGTTTATGCATTATTGGTACACCTCACTCCTGTAGCCTACATTCACATGAATTTATGGGCACCCAAGCA TGCACCTAAGATAGTTCTCTAAATAAAGCAATTTTGTTTAAGTCATAAACATTCACATATGTATGTGGCCAACATTTATA ACAAAGTGTTTTCATTCATAAGACTTAAATTCAAAATCTTATGAAAAATCAAACATGTACAATTTTAACCAACCACCAAT TACTTATCGCTCAATGTAAAATACCCTCACAACACAACAAAACACAACAATTATATAGTTGGATCATGATATGAAAATAT CATTATTCATATTGTATTGGTTGTAATTTTTCATAGGACACCGGCTTCGTTGCATATTCAAAGCAGCCCAGTTGTCGTTT TGTTTGTTTCCCACAATTAAACGCCATTTGTTGCCTTGTTCACATCGAGCAATCCACGTCTTTTTCTGCCACCAAAACAA CACTCCCCTTTCATTGTCTCTCTCACCTTCACCCTCTTCTTATACATTCCTTTTCCAAAACCTCGATCACTCTCAAACCA AACCAACAACAACAATGGCATTGCAATTGTTCTCCCCCAACCCAGAACAACAACAAGAAGATGCTGCAGACACACTCATC AAGCTCGAATCAGCATGTTCTGACATGAGATCCCTCCTCCAATCCTCAGAAAAAATGGAACAAAACTTGGAAACCATGGA AACAAGGCATGATCTTTTACAAGGAACACTCTCATCAGCATCCAGAAAGATCGCCCCTCTACAATCCTTAGCCATGTCGA GAAAAGCACTCGACACAAGAATACACAGAGCAATTTCCCCTGCTCTTGCACTGCTTCAAACTTTCAAGCTTGCAGAGTCA CTCCAAAATGACCTCCTTGATCTCTCAACAAAACTCTCAGAAGAGAACACACATCAGAAAAGGCTCCACAAGCTTCTAGA TTACATGGATTGCGTTGATCGGTTAAACGAGGCGATTAACGCGATATGCCGAGACGTTGAGCCGGTGATTCAGAAGCTTC AAGAGGTGGTGGAGTTCATAAGCAGAACAAAAGCTGCAGATTCATACAGAACGCAGAGGCTGAGAGAGGCGCTGGTTACT CTCAAGGCGCTTTATGAGACTGAGGTGGATGAGATGAGGTTTGAGGGTTTGCTTGATCAGGCTTTGGTTCACATGCAAGA TGAGTTTGAGGCTCTGTTGCTGAAGATGAAGCATAGGAAGCTAGGAGACATGTCACAAGAACATGTTGGCAATGGCACTG AGGTTGTTAAGGTTGCATGTGATTTGGGATCAGAACTGGAAATTGAAGTCTTGAGACGAATTTCAAACATTCTTGCCAAC AATGATTGCCTGGATATATGCATTGACATATACGTTAAGGTACAACCCTATATCATGAATTATCATCAACACTTTATATA TTTTATTATCAACTATTTGTGAAAAAAATAAGTGAAACCAAAATCATTAGTCTTACGTATTTTTCCCGTGTATCTAAACA TGCACTATAATTGTTTGGAACAACTTTTATTTCATTGGTATCAATTTTGAAACTCATAAATATTATGTGTGGTTGGTTCC GATCATGGAATCTCATAATCAACTATGAGCAGGTAAAATCAATTTTGAATGATTATATAGATGTTTGAGAGTCGATTCGG TTCTCAAAATCAATTCTGATAAAGATTAGAGAGAGTAGCTTTTATGTTAAGTATAATCAATTATGAGATTATACACAACT GAATTTCACAACACTAACCTATGAAAATCACTATTTTCATAAACGTATTGAAACATAAACTTCTCCATTTCCAACTTACT TTTACTATATCGATTTATCTGAAACAAATTGTGACATCGCTGATCCGAACATGCAATATATGATAAATCAAACTTATCTC TTCATATTTTTCTCTTCTTTTCCCATGACATGTGTATAAACATCATTTTACTCCATGACATCTCTTTGGATTAGCAATAA CTAATTTTTGTTCAAAATAATCATAGTCGAAATTCTAAGAGAGCACTAATAATAAAAACGCAAACGAATCAGTATTGAAG GAGTAAAAGAAATTTCATGGGAAAGTGCAGCTTTTAAAATTCTTAATATATTAGATACTTCAATTTCTTGATTATAATTT CAGTAGTGATCTAAGGTACTTAACAAGCTGCTTAATCTAATCCAAACATTTAGATAATGACTACTAGTGTTTAATTAAAA CTTGCAATTGTCCATTTATACTCATCATTTTGTGTTGATTGATTCAATAGGGGAGATATAGAAGGGCTGCAAAAGCATTG ATGAAGCTAAGCCCTGATTACCTGAGAACATACACACCAGAAGGAATCGATGAAATGGAGTGGGAAAGCTTAGAGACCGC AATAACCCTTTGGATCCAACACCTTGGAGTTGCTGCTAACAAGGTCCTCCTCTCAGAAAAGAAACTCTGTGAGAGGGTCT TGGGTGAAACTATGGAAGGACTAGTCTGGCCTGAGTGCTTCGTGAAAATTTCAGACAAGATCATGGCTGTGTTTTTTCGG TTCGGAGAAGGTGTTGCCAGAAGCAGCAAGGAGCCTCAGAAGTTGTTCAAGTTGTTAGACATGTTTGAATCAATGCAGAA ACTCAAACCCCAAATCATGGAAATCTTTGATGGTGAAGCTGGAGTGGACATTTGCACAAGGTTTAGAGAGCTTGAAAAGC TCATTGTTGATGCTTCAAGCAAAGTTTTCTGGGAGTTTGGTCTCCAAATTGAAGGAAATTCTGAAGGCCTTCCACCGCCA CAAGATGGCTCTATTCCAAAACTTGTGAGATATGTCGTCAACTACCTCAAGTACCTTGCCACAGCGAATTACAGAGCAAC CATGGCTGAAGTTCTCGGAACAGAACAAATATGGAAAACAGGGGTGTTCGCGAAACCTGAGGAAGACGATGAGGGTTTAC TAAAGCATGCCATTTCCAATGTCATGGAGGCACTTCAAAGAACCATTGATTCCAAACGCTCTGTTTGCAGGGACAAGATT TTGATCAACATATTCATGATGAACACGTATTGGTACATGTACATGAGAACAAAAAACACAGAGCTTGGTGAGTTGTTGGG TGAGGATTACATGAAAGGTGGTTACAAAGCAGTGGCAGAGGAATCAGCTTACTTGTACCAGAAGCAAGCATGGGGAGTTT TGGTGAGGATTTTGGATGCAGAGGATCTCAGGGAACAGGGGAAGGGAAGCATTGGAAGATTGGTGGAACAGAAGATTGAG ACATTTTTCAAGTGTTTGGATGATATTTGTGAGAGGCACAGAGTGATTTATAGCATACCAGATGCTGATTTGAGGGAACA GATGAGGGAAGCAACCATGAAGCTTGTGGTTTCTGCTTATGCAGAGTTCTTGGAGTCTTACTCTGGATTGTTGCAGAGGA AAGTGTATCCGAGTCCTGAGAGGGTGCAAGGGATGTTGAGGAGGGCTTTTGATGGTGGTGATGGGAAATTGAAGAGGAGG AACACTACTCCTAATGATAGGAATGGTGGACATAATTCTATGGAAGGTGATAATAGATGGTCCAGATAAGGGATCAATCT CACCAGAGACTTCTTTTCTTTTTTGTGTAAGCACATGTATCTTCTCTACAAGAAGTAATATGGCTCGAGGTGGTAATATC TACACTACACCTCAAGACTCAAGTCGATACATTGCTTAAGAAAAATGAAATATGCACAACTTGAAACAGTCATATGTTGA TTTCACTAAGAACATTGTTTTTGTTTTTTCATTTTTTGTACATCATCATAGTTTCGAACATAATGTAATTCACTGTGTTA TAAACTATGGAGAAAACCGATTAGCAATGAGCAAGTTATAAGATTTTCTGTTTGTTTATTTTTTTCAATATGCTGGGAAT ATGCTTTGTTACTCCTGAATCTCCCAAGGAGCATTTTCTTCAATTTTCAGGGTTGTA
CDS sequence (LotjaGi5g1v0034000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTATCAACGAATCCGCAGAAGAGATATACAGTGGGATTTATGATCAAAAGACACCGGCTTCGTTGCATATTCAA AGCAGCCCAGTTGTCGTTTTGTTTGTTTCCCACAATTAAACGCCATTTGTTGCCTTGTTCACATCGAGCAATCCACGTCT TTTTCTGCCACCAAAACAACACTCCCCTTTCATTGTCTCTCTCACCTTCACCCTCTTCTTATACATTCCTTTTCCAAAAC CTCGATCACTCTCAAACCAAACCAACAACAACAATGGCATTGCAATTGTTCTCCCCCAACCCAGAACAACAACAAGAAGA TGCTGCAGACACACTCATCAAGCTCGAATCAGCATGTTCTGACATGAGATCCCTCCTCCAATCCTCAGAAAAAATGGAAC AAAACTTGGAAACCATGGAAACAAGGCATGATCTTTTACAAGGAACACTCTCATCAGCATCCAGAAAGATCGCCCCTCTA CAATCCTTAGCCATGTCGAGAAAAGCACTCGACACAAGAATACACAGAGCAATTTCCCCTGCTCTTGCACTGCTTCAAAC TTTCAAGCTTGCAGAGTCACTCCAAAATGACCTCCTTGATCTCTCAACAAAACTCTCAGAAGAGAACACACATCAGAAAA GGCTCCACAAGCTTCTAGATTACATGGATTGCGTTGATCGGTTAAACGAGGCGATTAACGCGATATGCCGAGACGTTGAG CCGGTGATTCAGAAGCTTCAAGAGGTGGTGGAGTTCATAAGCAGAACAAAAGCTGCAGATTCATACAGAACGCAGAGGCT GAGAGAGGCGCTGGTTACTCTCAAGGCGCTTTATGAGACTGAGGTGGATGAGATGAGGTTTGAGGGTTTGCTTGATCAGG CTTTGGTTCACATGCAAGATGAGTTTGAGGCTCTGTTGCTGAAGATGAAGCATAGGAAGCTAGGAGACATGTCACAAGAA CATGTTGGCAATGGCACTGAGGTTGTTAAGGTTGCATGTGATTTGGGATCAGAACTGGAAATTGAAGTCTTGAGACGAAT TTCAAACATTCTTGCCAACAATGATTGCCTGGATATATGCATTGACATATACGTTAAGGGGAGATATAGAAGGGCTGCAA AAGCATTGATGAAGCTAAGCCCTGATTACCTGAGAACATACACACCAGAAGGAATCGATGAAATGGAGTGGGAAAGCTTA GAGACCGCAATAACCCTTTGGATCCAACACCTTGGAGTTGCTGCTAACAAGGTCCTCCTCTCAGAAAAGAAACTCTGTGA GAGGGTCTTGGGTGAAACTATGGAAGGACTAGTCTGGCCTGAGTGCTTCGTGAAAATTTCAGACAAGATCATGGCTGTGT TTTTTCGGTTCGGAGAAGGTGTTGCCAGAAGCAGCAAGGAGCCTCAGAAGTTGTTCAAGTTGTTAGACATGTTTGAATCA ATGCAGAAACTCAAACCCCAAATCATGGAAATCTTTGATGGTGAAGCTGGAGTGGACATTTGCACAAGGTTTAGAGAGCT TGAAAAGCTCATTGTTGATGCTTCAAGCAAAGTTTTCTGGGAGTTTGGTCTCCAAATTGAAGGAAATTCTGAAGGCCTTC CACCGCCACAAGATGGCTCTATTCCAAAACTTGTGAGATATGTCGTCAACTACCTCAAGTACCTTGCCACAGCGAATTAC AGAGCAACCATGGCTGAAGTTCTCGGAACAGAACAAATATGGAAAACAGGGGTGTTCGCGAAACCTGAGGAAGACGATGA GGGTTTACTAAAGCATGCCATTTCCAATGTCATGGAGGCACTTCAAAGAACCATTGATTCCAAACGCTCTGTTTGCAGGG ACAAGATTTTGATCAACATATTCATGATGAACACGTATTGGTACATGTACATGAGAACAAAAAACACAGAGCTTGGTGAG TTGTTGGGTGAGGATTACATGAAAGGTGGTTACAAAGCAGTGGCAGAGGAATCAGCTTACTTGTACCAGAAGCAAGCATG GGGAGTTTTGGTGAGGATTTTGGATGCAGAGGATCTCAGGGAACAGGGGAAGGGAAGCATTGGAAGATTGGTGGAACAGA AGATTGAGACATTTTTCAAGTGTTTGGATGATATTTGTGAGAGGCACAGAGTGATTTATAGCATACCAGATGCTGATTTG AGGGAACAGATGAGGGAAGCAACCATGAAGCTTGTGGTTTCTGCTTATGCAGAGTTCTTGGAGTCTTACTCTGGATTGTT GCAGAGGAAAGTGTATCCGAGTCCTGAGAGGGTGCAAGGGATGTTGAGGAGGGCTTTTGATGGTGGTGATGGGAAATTGA AGAGGAGGAACACTACTCCTAATGATAGGAATGGTGGACATAATTCTATGGAAGGTGATAATAGATGGTCCAGATAA
Protein sequence (LotjaGi5g1v0034000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLSTNPQKRYTVGFMIKRHRLRCIFKAAQLSFCLFPTIKRHLLPCSHRAIHVFFCHQNNTPLSLSLSPSPSSYTFLFQN LDHSQTKPTTTMALQLFSPNPEQQQEDAADTLIKLESACSDMRSLLQSSEKMEQNLETMETRHDLLQGTLSSASRKIAPL QSLAMSRKALDTRIHRAISPALALLQTFKLAESLQNDLLDLSTKLSEENTHQKRLHKLLDYMDCVDRLNEAINAICRDVE PVIQKLQEVVEFISRTKAADSYRTQRLREALVTLKALYETEVDEMRFEGLLDQALVHMQDEFEALLLKMKHRKLGDMSQE HVGNGTEVVKVACDLGSELEIEVLRRISNILANNDCLDICIDIYVKGRYRRAAKALMKLSPDYLRTYTPEGIDEMEWESL ETAITLWIQHLGVAANKVLLSEKKLCERVLGETMEGLVWPECFVKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFES MQKLKPQIMEIFDGEAGVDICTRFRELEKLIVDASSKVFWEFGLQIEGNSEGLPPPQDGSIPKLVRYVVNYLKYLATANY RATMAEVLGTEQIWKTGVFAKPEEDDEGLLKHAISNVMEALQRTIDSKRSVCRDKILINIFMMNTYWYMYMRTKNTELGE LLGEDYMKGGYKAVAEESAYLYQKQAWGVLVRILDAEDLREQGKGSIGRLVEQKIETFFKCLDDICERHRVIYSIPDADL REQMREATMKLVVSAYAEFLESYSGLLQRKVYPSPERVQGMLRRAFDGGDGKLKRRNTTPNDRNGGHNSMEGDNRWSR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 108 | 775 | 668 | 9.6E-290 | – | |
| PANTHER | 108 | 775 | 668 | 9.6E-290 | ||
| Coils | 122 | 149 | 28 | - | – | |
| SUPERFAMILY | 218 | 767 | 550 | 2.3E-74 | ||
| Gene3D | 259 | 776 | 518 | 6.7E-101 | – | |
| Pfam | 407 | 762 | 356 | 1.1E-69 | ||
| MobiDBLite | 767 | 798 | 32 | - | – | |
| MobiDBLite | 767 | 781 | 15 | - | – | |
| MobiDBLite | 782 | 798 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of LotjaGi5g1v0034000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…