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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0039300 |
| Transcript ID | LotjaGi5g1v0039300.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endo-1,4-beta-xylanase A; TAIR: AT1G58370.2 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein; Swiss-Prot: sp|A3DH97|RSGI6_CLOTH Anti-sigma-I factor RsgI6; TrEMBL-Plants: tr|K7M5U1|K7M5U1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0039300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:6648458..6656644) extracted from Lotus japonicus Gifu genome v1.2.
ATCTTCATCTTCTTTCTCACTCACTCACTCACTCCCTTTCTTCATCCTCTACCGCCTCACTACCTCACTTCTTCTCTTCA TCTTCTTTATTTTTCAATCCAGTGTTGCATACAACTTCCTTCCTCACATTTATTGGGCACATCGCTCTCGTTGTTCTCCT CTCATATGTTCCTCACTTTTTCTCATCATCTTCTTTCTTGGTATGCCATGGTTGCTATTAAAAATAGGTTTTGTCAATGT CCTAATCCTACCGGATTCTAAAATCCATAAGGTAAAAAACTCCACGTCCATATTAATGAATTACAGGTTTTTAAACTTGG AATGAAGTTCCTTAAACAATACCCGATTTTAAAACTCGGTATCCAAATTGTTTGTTTTATAGTTCCGAGAATTACTAAAT CGTAATATATAAAAGGGGAGTTGTACCAGTTGGTTTTTTAAAATCAGGCAACTTAATTTAGTATTTTACGAACATTGTTT TGAAACTAGCTTCTAGAATTAAGAACCCGAGATCAAATATGCATTTTTATGTTCAGGGTATTACATTTCGGAACCAAATT GCTCAACAGTTCTAAGAAACTGGTAAACAATAAAATTTCGAGAGGCATTATACAAATTTACTACATTAAAAGATTAACGC TTGTTGTGTAGGTTGCTAATTCAACCACAATTTTATTTGCCCATGAAGCATAACTCAAATGGTAAGAGTTGATGGACATA TGAGTTGAGAATGAAAAATTTACCTATAAAAAAAACCTGAATTTTATTTGTTGACAAATACAAAAACAAAAATGCGAAAT GTTATTTTATTTGCAGCCTAGGAGAATTTAAGATTTGGTCTTCCCAGATCATAATCTCCTCATGCAGTGCTTTCCATTCT GTGGAGTGTGGACCAATATATAGTCATAGTACGATGATGTGTGTTCCCCAGCTGCTGCTTTTTTATGTTGGACCAGACCA CACAGACAGAAACAGAACAACTTCTGATTCAGGTAACCGCAGTCACTAGGTTTTCTGATTCGCTTCAACATAATATTTGT TCCTATCTTTATTATCTTCCACATAAGAAAATTTGGTTTCATCTGAATTTCTCAAGGGTTATAACTTATAGGGTAATGTC TTTAGTTTAATTTCAGTTTTTATTATCTTTTATTTATATGTTGGAGTTTGGATGTGTAGTTTTTTTGTTCAGTACCATAA TCTTATACGTGCAGAAGGGAAAGTTATCTCCACCTAACACTGCAAAATCTTGCAATCTAAGTCTCTAACAAGGATTGAAT ATTTAATGTGAAATTAAGGAATCAAAGCATCATTCCTTAATCTGTGATGCTTACACAAGCTTCAATTCCAATTCAAGCAT TACTAATCTGCAAGACAAAGCAAAAAGCACAGGAACCTGGGACGGGGAAAAAAAAGAGATTTTTTTTTTTTCCTTTTTAT ATTGGGTTTATTTGAAAGGATTGTTCATGATTATTGATTCCAAAGTTTGGATAATGATATTATAAATCCAGATGAAGATG GGTGGGAAGGAAAATTGCTGGTTGGCCTCTCAGTTTTCCTTAGCCTTCACTCTTAAATTTGCTGAGTGGATGGGTATATA ATGAAGAGGTTCTCTGTCTGCTGCTTCAGAAGTAGTGTCTTCAAGTCTCACTCCCACAGGAAGCACAAGAAATCTCAGTC TCAGGTACCTTACCCTGCCTCTTTCTCTGTTGAATGCCTTTTACACTTTGTCAGTAGTCTTATTTCTTTAGGCTATGTCT GGATACCGGTCGGTACCGGTGCAAATGGACGTTAGCACTCACTTCATGATAAAAAGTGAATGAATCTGTTCTCATGGATT GGGATGAAATTCGGTTCATGTTGCATTCAACTGTTATCTCAACACACACTTAGTTATAACTTGATGACATTTTTTCCAGA CACTTGCTTTAGTACCCCTTGTTTGGCTCTTTCCTTTTATTGAGTATAATGAATTTCACCGCAGATTTTTATTAATGCTC AACTAAGAGATTGGCATCTTATGATACACAATTTGGTGACATTGTAAGGGATGGAGTCTGAGAGACTGAGATGAACCCTC TCAGATAACCTTCTCAAGCTTCATTGCAGAATGCAGATTATATGTTTTGCTCTGAAGTGTATCAAAGGTTACAGCTACTT GGTGTTGTTGATTTCTTACGTTAGATTAGCAATGTGTATAATAAATTATGCAGTAAAATCGGTAAGATTTTCTCAAGTCA AATGCTGCAACTTCTTACGATTGTAGAAGTAGTATATAGTAAACAACACAGTTTAAACAAATCCTATGGTAAAAAAATAG CCAGCAGATGAAACCTGATGTGCACTAAGCAGTAGAACTCCTTGCCTCCTCTTCCTGCGCTATTTAAGGAAGATCACAAA TGGGAGCAGGGATGGGCCAAGATGATTAAAAATGGGGCAGCCATCCCCTCAAGAGATTTGTCAAACCATACTACCCAAAA AGCATTAGATTTTTTTTCTTAATAAAGTAGTATTTAAATGTTGTATTCACCCCTCAATTTGTATATTGTCTTTTGCAATT TGTCACTTGATTTTGTTTAATGTGTTAAATTTTTCCCCCTTTCTTCTGTTTCCGTCCCTGAATGGGGGAGTTCTTCGCGG CGTGTAAAACACACATTCAAAACATATCACAAGCTGTACCATCTAGGTACATAGTTTCTTCTTGGTGTTTAGCACCATTG TTTTCTGATATTGTCTTGTTTGACAGATCATGGCAGGAAACATCTCTGGTCCAACTGTTTGTCAGGGTCCTAATATTTTG CACAATCATGATTTCTCTGGTGGGCTTAACTCTTGGCATCTCAATTGCTGCAATGGCTATGTAATTTCAGCTGACACAGG TAATCATGGAGGAATTTCAATGGAGTCGGGTGGTAATTATGCAGTTATCACTGACCGAAAGGAATGTTGGCAAGGTCTTG AGCAAGATATCACAGACAGAATATCCATTGGTTCCACTTACACGGTTTCAGCTTGTGTTGGAGTATCTGGGCTTTCTCAG GGATCTGCTGATGTTCTAGCTACTCTGAAACTAGAATATCATGGTTCAGCTGCTCGTTACATGTTCATTGGAAGGTATAA AACTTATTTCATTGCATCCTCTTTCTTGTTTTATAGTAGAAAAATGCCATTACATGTTAACCATTGTTTTGTACAGAACT TCTGCTATGAAGGGTAGCTGGGAAAAGTTGGAAGGGAAATTCTCATTATCAACTATGCCTGATCGGGCTATATTTTATTT GGAAGGACCTGCTCCTGGAGTTGACATCCTTATACGATCAGTAGAGATCAACTGTTCCAGTCCAAATAATAATGTATGTC ATGAAATTATGAATTATGAATATTGTTATTTCTTTGGGCAATTTTACATAGTGGCAAATTCTACTATTGTTTGATGAACA TCATCTAGCTCATACTTGTGATTTAGTCATTACTTTTTCATTGTATAGATTGATTTTTCTATAAACATGTGCTAGTTTTC TTCTTTTAATTGAACTGTGAAATCTGTGTATTTTTATCACACTAACTTGTGTATTTCTTTCTCTTGTTTCTAAAGACCAC AAGCACAAAATGTGTTACCACAGGAGATGACAACATCATAATAAACCCCCAGTTTGAGGATGGCTTGAATAGTTGGTCTG GAAGAGGCTGCAAGATTATGTTGCATGATTCAATGGGAGATGGGAAAATTGTTCCGAAGTCTGGGAAGTTCTTTGCATCA GCAACAGAACGCACACAAACCTGGAACGGGATTCAGCAGGATGTAACTGCACATGTGCAGCGCAAGCTGGCCTATGAGGT CACTGCTTTAGTTCGAATATTTGGTAATAATGTTACTAATGCTGATGTAAGAGCTACTTTGTGGGTTCAAACACCAGATC TTCGAGAGCAGTATATAGGCATTGCAAAGTTAGTCTCTTATTTTTGCTATGAAGCATATCACTTTCATGCTTATTATTCT GGAATATTGATAAACTTAACAAAATGAAACTTTCTACAGTATGATTTGATCATGGCTTTTATGCATTGGTGATGTTAGAG AGCTCTCTTAACATTTATTTCAATTGCTGAATGAAGTTGGTGTGTTCTGAAGTGTGCAGGCAACAGATAAAGATTGGGTT ACAATGCAGGGAAAATTCCTTCTAAATGGCACCCCATCAAAAGTGGTGGTTTATTTAGAGGGCCCCCCTTCTGGCACTGA CATTCTTGTCAATACTTTGGTAGTTAAGCATGCAGCAAAAACACCTCCTTCAACTCCACCAGATGTAAAGGTTGGACTTT AGAAACAAGTTTTGTCAATTATTTTAATAATACTAATGTTTTTTTTTTTCTGAAACTGAATAATACTAATATTTGTGTTT CCTGAAATTGTTTCACACAAGCATTGTTTAAGAACTTTGCTGCTGCCTTATTACACTATATGTTTCAAGTAACTGTATTC TGCATTCAAAGCCTTATCCCACTAGGTGAGATCGGCTATATGGATCGCTGATCCATATTAAAGATATCAACCAGCATCGT CTGCTGAAGGCCCAACAAAAATTCCCCCTTTATCCAGGCTTAGGACGGGCTATGCAAGCATAGGCGGAGATTTTTGTTCC AAGTAACTAACAAAGTTGATTTTTGTTTTGCAGAATCTTGCTTTTGGGGTTAATGTCATTGAGAACAGCAATCTGGCTGA TGGCACCAACGGATGGTTTCCGCTTGGTAATTGCACTTTAAGTGTTAAAACAGGTTCACCTCATATAATGCCACCAATGG CAAGAGATTCTCTTGGTCCTCATGATCTCCTAAGCGGGCGCTACATCCTCGTAACTGGTCGGACTCAAACATGGATGGGT CCTGCTCAGATAATCACTGAGAAATTGAAACTTTTTGTGACTTACCAAGTATCTGCATGGGTCAGGATTGGTTCAGGATC AAGTGGGCCACAGAATGTGAATGTTGCTCTTGGTGTTGACAACCAATGGGTCAATGGAGGACAAACGGAGGTTTCTGATG ACAGATGGCATGAAATTGGCGGGTCCTTTAGAATTGAACAGCAGCCATCAAAGGTTATGGTTTATATCCAAGGTCCTGCT TCTGGTGTGGATTTAATGGTTGCTGGACTTCAAATTTTTCCTGTTGATAGACATGCAAGGTTTAGATACTTAAGGATGCA GACAGACAAGGTGACATCTAGTTTTCTTGTATAACATATATAATTGATTTTGCAGCATACCTTTACAAACCTATGGGTAG TTCCCAAGATGGCTTGCACTTGAACTGGCTTGAATGAGTAATATTTGGTTGTGAATTACTATTTGTACCACGGGTTTTCT CCATGCACCAGCAACATCGGGAAATTAATTTCTGGTAGCACGTGGGCTGGTGCAAGGAGAAAAAAATGCGGTACAAATCA AAGTTGTCAGGATCCTGCAATTTGTGGGAGGATTTCCGTTCTGGATCCTCCTAATCGGGCTCTACATCCTTGTACTACAA ATAGTAATCCCTCATTTGGGTCACACCCTAGGCCCATTCCCAACACCCAAAGGAAAAATAGGAAGAAAAAAGAAGAACAA ATGATCTGCAAATAATGGCCTCCAGAGTGGTAGGTATATGCCTTGAGGTTTTTAGTCACAACAAGTTTATAATATAACAT AGTATTTCTATGTGTTAAAATGGTTAGGAACTTAGGATGCATAGAATTGATACCAGAATATAGATTAATTTTTTTTACTA TTATCTCGTCCACAGGATTACTTATGATACATGTCTTCCCCCTTCCTATTTTATGTTTATACGATCTTCCAACCCAATTC ATGAATTTCCTTATCGCTAGAATCTGCATAATATTTCTGAGAGGAGTGCTAGCAACACACTCTTTTAATAACACACTTCT TGTGTATGGTTTATTTTTTGAAAAGTCACATTTCTCTTACTTTCTTCTTAAATGTGTTGACCTAAACAAAAAATAAGCCA ATCAGGAGGAGTGTGTTATTAAAAAGGAGAAGTGTTATCAACACTCACTTTTCAACACTCAATGATTTGTTCAAATTTAT GTGGGTCCTACTAAGTTGGAAGTGGAGCCTATATGTTTAATGGAGCTCACATGAGTTTCAACCAATCAATGAGAGACATT TTTCTTATTAAAAGAGTGTGTTGCTATCATTTCTCTATTTCTGATGACTAAACTATACGGTCCCCCTAATATGCACCACT TTAAAAGTAAGGATATTGCCCCATGTCTTAATGCCCCATGTCTTAATAAATGTAACAGCTAAGTATATTCAGACTGGAAT GCCTAATTTTTTTATCATATCCATTCTTCATTGATAGAATATGTGGTTCTCTACATTATTTGTATATAAAGTTTTATATC CATTTGCTGCATTGCAGATTCGTAAGCGTGATGTTATTCTGAAATTCTCTGGGGTTGACTCTAGCAACTACATTAACACC ATGGTGCAAGTTAGGCAAACACAGAACAATTTCCCAATTGGAACATGCATCAGTAGAATGAACATTGACAATGAAGATTT CGTTAACTTCTTTGTGAAACATTTCAACTGGGCCGTGTTTGGAAACGAGTTGAAGTGGTATTGGACTGAGCCACAACAAG GGAATTTCAACTACAAGGATGCTGATGATCTGCTAGACTTGTGCCAAAAGAACAAGATAGAAACTCGCGGACACTGCATC TTCTGGGAAGTGGATGGAACAGTTCAGCAATGGATCAAATCACTGAATCAAAATGATCTGATGACAGCAGTCCAGAATCG TTTAAATGGTTTGCTGACTCGCTACAAGGGCAAGTTCAGTCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTT ACCAAGATAGGCTAGGTAAGCAGGGACGGATCCAGGTTGATGCAAAATGGGACAGTCTCAAATTTTCTTAAGTGTTTAGA TGTTACAAAATAATTTATACTGCCTCATTCAATTACTCATTATTTTGCTTCTACCCTTACCAATTTTTTCTCGTTCTGTC CCTATAGGTAGGGATATCAGGGCAAAAATGTTCAAGACAGCAAACCAACTAGATCCATCTGCTACACTGTTTGTGAATGA TTACCATGTTGAAGATGGATGTGACAACAAATCATGCCCAGAAAAATACATGGAACATATTCTTGATTTGCAAGAGCAAG GTGCCCCAGTTGGAGGGGTTGGAATTCAAGGCCACATTGATAGTCCAGTGGGGCCTATTGTTTGTTCTTCCCTTGATAAA CTGGGAATTCTTGGTCTCCCTATATGGTTCACTGAGCTTGATGTGTCTTCTATCAATGAACATGTCAGAGCCGATGATCT TGAAGTTATGTTGCGCGAAGCGATGGCTCACCCTGCGGTAGAAGGCATCATGTTGTGGGGGTTTTGGGAGTTGTTTATGA GCAGGGACAATTCACACTTGGTAAATGCTGAAGGTGACATCAATGAAGCTGGGAAGAGGTTCCTTGATCTGAAACGAGAG TGGTTGTCTCACAAACATGATCATGTTGATGAGCATGGTCAATTCAGCTTCAGAGGCTTTCATGGAACATACAATGTTGA AGTTGTGACACCAACAAAGAAAATTTCTAAGACTTTTGTGCTTGACAAAGGTGACTCCCCAATGGTGGTATCCATTGATT TATAAGCATCCTGCTTCACACAAGAATTAATATCATGTCTTCTTTTCTCCTTGATTGGGTTTGCTTGTACACAATGTTGG TGGTGTAATGTACTAATGTTGTCTTTAGTCTTTACTAGTCTATGCCATTAATCCAGTATGGCAAATAAATAAAATGGGTT GTTACTAATACCAGTACTTTGTTTGGACAATTTTATTTTAGATTTAATATCATATTCTTAGGTTTACTGGTTGATATCCA AAGAATCAAATTTGGGGGTTGCAGTAGTAACTTTATGTTCTTATTTAGTGTTGGCAGTATAGCCAAAGATGAACAGAATG CTATAAACCTGTAAGTAGCTATGCTTTTCTGATTTTATTTAACTGTCCAGGAAGAAGAGAAGAAATACACATATTAAGGG GTGCAATTAATTTTGTTACTTTTCATAAAAGTATTATTTGATTTCCTATTTCACCCTTTAAAATGTATATTATCTTTCCT CATTTATTGTTCCTGCAATAACATTTC
CDS sequence (LotjaGi5g1v0039300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAGGTTCTCTGTCTGCTGCTTCAGAAGTAGTGTCTTCAAGTCTCACTCCCACAGGAAGCACAAGAAATCTCAGTC TCAGATCATGGCAGGAAACATCTCTGGTCCAACTGTTTGTCAGGGTCCTAATATTTTGCACAATCATGATTTCTCTGGTG GGCTTAACTCTTGGCATCTCAATTGCTGCAATGGCTATGTAATTTCAGCTGACACAGGTAATCATGGAGGAATTTCAATG GAGTCGGGTGGTAATTATGCAGTTATCACTGACCGAAAGGAATGTTGGCAAGGTCTTGAGCAAGATATCACAGACAGAAT ATCCATTGGTTCCACTTACACGGTTTCAGCTTGTGTTGGAGTATCTGGGCTTTCTCAGGGATCTGCTGATGTTCTAGCTA CTCTGAAACTAGAATATCATGGTTCAGCTGCTCGTTACATGTTCATTGGAAGAACTTCTGCTATGAAGGGTAGCTGGGAA AAGTTGGAAGGGAAATTCTCATTATCAACTATGCCTGATCGGGCTATATTTTATTTGGAAGGACCTGCTCCTGGAGTTGA CATCCTTATACGATCAGTAGAGATCAACTGTTCCAGTCCAAATAATAATACCACAAGCACAAAATGTGTTACCACAGGAG ATGACAACATCATAATAAACCCCCAGTTTGAGGATGGCTTGAATAGTTGGTCTGGAAGAGGCTGCAAGATTATGTTGCAT GATTCAATGGGAGATGGGAAAATTGTTCCGAAGTCTGGGAAGTTCTTTGCATCAGCAACAGAACGCACACAAACCTGGAA CGGGATTCAGCAGGATGTAACTGCACATGTGCAGCGCAAGCTGGCCTATGAGGTCACTGCTTTAGTTCGAATATTTGGTA ATAATGTTACTAATGCTGATGTAAGAGCTACTTTGTGGGTTCAAACACCAGATCTTCGAGAGCAGTATATAGGCATTGCA AATGTGCAGGCAACAGATAAAGATTGGGTTACAATGCAGGGAAAATTCCTTCTAAATGGCACCCCATCAAAAGTGGTGGT TTATTTAGAGGGCCCCCCTTCTGGCACTGACATTCTTGTCAATACTTTGGTAGTTAAGCATGCAGCAAAAACACCTCCTT CAACTCCACCAGATGTAAAGAATCTTGCTTTTGGGGTTAATGTCATTGAGAACAGCAATCTGGCTGATGGCACCAACGGA TGGTTTCCGCTTGGTAATTGCACTTTAAGTGTTAAAACAGGTTCACCTCATATAATGCCACCAATGGCAAGAGATTCTCT TGGTCCTCATGATCTCCTAAGCGGGCGCTACATCCTCGTAACTGGTCGGACTCAAACATGGATGGGTCCTGCTCAGATAA TCACTGAGAAATTGAAACTTTTTGTGACTTACCAAGTATCTGCATGGGTCAGGATTGGTTCAGGATCAAGTGGGCCACAG AATGTGAATGTTGCTCTTGGTGTTGACAACCAATGGGTCAATGGAGGACAAACGGAGGTTTCTGATGACAGATGGCATGA AATTGGCGGGTCCTTTAGAATTGAACAGCAGCCATCAAAGGTTATGGTTTATATCCAAGGTCCTGCTTCTGGTGTGGATT TAATGGTTGCTGGACTTCAAATTTTTCCTGTTGATAGACATGCAAGGTTTAGATACTTAAGGATGCAGACAGACAAGATT CGTAAGCGTGATGTTATTCTGAAATTCTCTGGGGTTGACTCTAGCAACTACATTAACACCATGGTGCAAGTTAGGCAAAC ACAGAACAATTTCCCAATTGGAACATGCATCAGTAGAATGAACATTGACAATGAAGATTTCGTTAACTTCTTTGTGAAAC ATTTCAACTGGGCCGTGTTTGGAAACGAGTTGAAGTGGTATTGGACTGAGCCACAACAAGGGAATTTCAACTACAAGGAT GCTGATGATCTGCTAGACTTGTGCCAAAAGAACAAGATAGAAACTCGCGGACACTGCATCTTCTGGGAAGTGGATGGAAC AGTTCAGCAATGGATCAAATCACTGAATCAAAATGATCTGATGACAGCAGTCCAGAATCGTTTAAATGGTTTGCTGACTC GCTACAAGGGCAAGTTCAGTCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAAGATAGGCTAGGTAGG GATATCAGGGCAAAAATGTTCAAGACAGCAAACCAACTAGATCCATCTGCTACACTGTTTGTGAATGATTACCATGTTGA AGATGGATGTGACAACAAATCATGCCCAGAAAAATACATGGAACATATTCTTGATTTGCAAGAGCAAGGTGCCCCAGTTG GAGGGGTTGGAATTCAAGGCCACATTGATAGTCCAGTGGGGCCTATTGTTTGTTCTTCCCTTGATAAACTGGGAATTCTT GGTCTCCCTATATGGTTCACTGAGCTTGATGTGTCTTCTATCAATGAACATGTCAGAGCCGATGATCTTGAAGTTATGTT GCGCGAAGCGATGGCTCACCCTGCGGTAGAAGGCATCATGTTGTGGGGGTTTTGGGAGTTGTTTATGAGCAGGGACAATT CACACTTGGTAAATGCTGAAGGTGACATCAATGAAGCTGGGAAGAGGTTCCTTGATCTGAAACGAGAGTGGTTGTCTCAC AAACATGATCATGTTGATGAGCATGGTCAATTCAGCTTCAGAGGCTTTCATGGAACATACAATGTTGAAGTTGTGACACC AACAAAGAAAATTTCTAAGACTTTTGTGCTTGACAAAGGTGACTCCCCAATGGTGGTATCCATTGATTTATAA
Protein sequence (LotjaGi5g1v0039300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKRFSVCCFRSSVFKSHSHRKHKKSQSQIMAGNISGPTVCQGPNILHNHDFSGGLNSWHLNCCNGYVISADTGNHGGISM ESGGNYAVITDRKECWQGLEQDITDRISIGSTYTVSACVGVSGLSQGSADVLATLKLEYHGSAARYMFIGRTSAMKGSWE KLEGKFSLSTMPDRAIFYLEGPAPGVDILIRSVEINCSSPNNNTTSTKCVTTGDDNIIINPQFEDGLNSWSGRGCKIMLH DSMGDGKIVPKSGKFFASATERTQTWNGIQQDVTAHVQRKLAYEVTALVRIFGNNVTNADVRATLWVQTPDLREQYIGIA NVQATDKDWVTMQGKFLLNGTPSKVVVYLEGPPSGTDILVNTLVVKHAAKTPPSTPPDVKNLAFGVNVIENSNLADGTNG WFPLGNCTLSVKTGSPHIMPPMARDSLGPHDLLSGRYILVTGRTQTWMGPAQIITEKLKLFVTYQVSAWVRIGSGSSGPQ NVNVALGVDNQWVNGGQTEVSDDRWHEIGGSFRIEQQPSKVMVYIQGPASGVDLMVAGLQIFPVDRHARFRYLRMQTDKI RKRDVILKFSGVDSSNYINTMVQVRQTQNNFPIGTCISRMNIDNEDFVNFFVKHFNWAVFGNELKWYWTEPQQGNFNYKD ADDLLDLCQKNKIETRGHCIFWEVDGTVQQWIKSLNQNDLMTAVQNRLNGLLTRYKGKFSHYDVNNEMLHGSFYQDRLGR DIRAKMFKTANQLDPSATLFVNDYHVEDGCDNKSCPEKYMEHILDLQEQGAPVGGVGIQGHIDSPVGPIVCSSLDKLGIL GLPIWFTELDVSSINEHVRADDLEVMLREAMAHPAVEGIMLWGFWELFMSRDNSHLVNAEGDINEAGKRFLDLKREWLSH KHDHVDEHGQFSFRGFHGTYNVEVVTPTKKISKTFVLDKGDSPMVVSIDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| Gene3D | 41 | 203 | 163 | 2.1E-33 | ||
| SUPERFAMILY | 42 | 198 | 157 | 4.08E-34 | ||
| Pfam | 44 | 184 | 141 | 5.4E-22 | ||
| PANTHER | 66 | 250 | 185 | 0.0 | – | |
| PANTHER | 66 | 250 | 185 | 0.0 | – | |
| Gene3D | 211 | 368 | 158 | 2.0E-31 | ||
| SUPERFAMILY | 214 | 368 | 155 | 2.55E-36 | ||
| Pfam | 215 | 353 | 139 | 3.1E-19 | ||
| PANTHER | 249 | 930 | 682 | 0.0 | – | |
| PANTHER | 249 | 930 | 682 | 0.0 | – | |
| Gene3D | 384 | 542 | 159 | 2.6E-32 | ||
| SUPERFAMILY | 385 | 545 | 161 | 1.28E-37 | ||
| Pfam | 387 | 530 | 144 | 1.8E-19 | ||
| ProSiteProfiles | 578 | 873 | 296 | 36.483 | ||
| SUPERFAMILY | 579 | 881 | 303 | 2.16E-93 | ||
| Gene3D | 579 | 882 | 304 | 9.7E-73 | – | |
| Pfam | 587 | 844 | 258 | 1.7E-46 | ||
| SMART | 624 | 874 | 251 | 1.5E-10 | ||
| Coils | 856 | 876 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Hydrolase activity, acting on glycosyl bonds | Catalysis of the hydrolysis of any glycosyl bond. |
Expression pattern of LotjaGi5g1v0039300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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