Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0040100 |
| Transcript ID | LotjaGi5g1v0040100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|P49044|VPE_VICSA Vacuolar-processing enzyme; TrEMBL-Plants: tr|Q5QL07|Q5QL07_SOYBN Vacuolar processing enzyme 2; Found in the gene: LotjaGi5g1v0040100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:6782183..6787307) extracted from Lotus japonicus Gifu genome v1.2.
CTCTAATTTTAAAAAAAAGAAAAAATTCTCCGAGACTTTGTACGTCTATTAACAAATGTTTCACCATATGCACCGCCTAT AAATTGCACCGTGAACTAGATATGTAAGAAGCTCAACTATCTATGAATTGTGGTGGGAGCTCACCTTCATTATTGATTGA GTGAGTCACTCACTATATCCATCTATTTAATCCTCTCCAACTTCCCTTCACCTGATTCACAGAATCACAATGGAATCTTC TCAATTTCCCTCCCTTCTCTTTTTCCTCCTCACCGCAGCCTTCCTCGCCGTCGCCGCCGCTGGCCGTGACCTCACCGGCG ATCATCTCCGCCTTCCCTCCCAAGCAGAAAGATTCTTCCGTGAACCCGAGAACGATGACAACGTTCAAGGGACTAGGTGG GCCATCTTACTTGCCGGTTCCAGTGGCTACTGGAACTACAGGCATCAGGTACGTGTAATCTTTCATGGTTTCAAACTAGA TTCTTACATGGAATTGAAAACATGCGTATGTTGCTGTTTGAGTGATTAAGCTTAATTGAATGAAAACTTTATTATTTGGT CATGTTAATAATAAAACTAACAAGTGTTTTTGTATAATAATTGTAACATGCTGTTTATTTAGTTACAAATTGTAACTAAA TAAATGACATGTTTGAATCAACTCTGTTTTATCAGAATTAATTGCCACACTCCCCGTAGGATAACTCAAGTGGTAGGAGC TAGGGACATATGAGTTGGACAGGTACAATTTATTTTTCCGATGTACAAAAAAAAAAGAGAATTAATTGCCACACTCAAAA GCTATTCACATAAACTTCTCTAGAGAATTGAAGTATCACTATTCTATTCTATGCAATCTTAACATCCCTCACCCTAAATA AATCATATTTTGATCAGCACAGAAAAAAAATAATTCAATTTTAGTTTCTGTTGGTAAAACCATTTTCAGTGTCATCCTTG CCTAACATGGTTGTTAATTTTTATGATACTGAAATTTCCATGGAGTTACTGTAAAGTATAGAGACTAAATTGAAAACAAT TGTCAATTATTGGAACCCAAAAGTTCAAGCAAGTCTGGTACCTAGCTTCCTATACATGAAAGAAACTCATGTTTAATATG GTCTGTCTATATACGCTGTACTTGTTTTCAATTTGGTTCCTACACCTCACATGCTACAGCTCTAACAGACATAACTAAAT AACTTCAACCTGAGAGTACTATAACTGTCATAGACTGCAAGGACCAAACTGAAAAGAGTTGAATGTTTAGGGACGATTTT TTTGTTTAATGTATATATAGGAATGAATCGATGTTTATGTTATAGGGTGTCATTGATTGGGATCAATAACATATTTTAAC CTTAATTTATTTACAATTTTCTATATGTATTTAGTTGTTTAGTTTTAATATGTTGTTTCCTCAGGCTGATGTTTGCCATG CCTATCAAATCCTGAGGCAAGGTGGCCTGAAAGAAGAAAATATTATTGTTTTCATGTATGATGACATTGCTTACAATGAA GAGAACCCTAGGCAGGGAGTCATCATTAACAAACCAGATGGGGGTGATGTTTATGAAGGAGTTCCAAAGGCAAGTTGTGT TAGTTTTCCGGCATCCCATATCCTATTGCTATTTCAAGTTTGATCGTCTCCTAATTATGAACTTTTTATTTTTTTATGGC AGGATTACACTGGAGCAGATGTTACTGCTAGCAACTTTTATGCTGCTTTACTTGGAAATAAGTCCGCTCTTACTGGCGGC AGTGGGAAGGTTGTGGATAGTGGCCCCAATGATCATATATTTGTATACTATACTGACCATGGAGGTCCAGGGGTGCTTGG TGAGTAGCCCTGAATTCTTCCAAAGAAACTTTATAATGAAAGACATGGACTGTGTAGGTTGTTTATGTGTTTCAGTTATG GTATAGACCTTGTTTGAGGTTACTACTGACAAATAAGCGTGTTTATTTTTGTTGTTTGGTTGATTGTGAGTTTATTTGGT AGATCATGTCTTAGAAGAATGAAACCTCTAAATATTTTAGCATTGCCTATGATCTCCTCAAAATGTAAACTGGGTTCTGC GGTGCTTGGTACTTTCAAGTTTCAACACAATAAACTGAAAATTTTGAACAGATAAACGATGTGTCTGAATGGAATGAAAT ATTTCAAAATTATTATTCGCTTGTTGGAACTTGGAGCACAGGAGTGGGTTCAAGAGAGTCCTGTTGGTCCTTTCTGTTTC TTATTTAGTCTTTTTGTAACACTAATATCTGCTCCTTTCTATTTCTTTTCTGGTCTTTTTTTGGGACTTGGGAGTGGATT TCAGGGATGCCTGCTGGTCCTTACTTATATGCAGAGGATCTGATTGAAGTCTTGAAGAAAAAGCATGCTTCCGGAACATA TAAAAGCCTAGTAAGTTACTAGTTATTATGATTTTCTTGTTTATATGTTTCAATCCTTGTTTGGGATGTTTAACATGTTT GGATTTCATCATTTCTGGGCAAATAATTTTTTTTTTATAATTTTTTCAAATGCTCTCTCAACTTTTAGCTGTAAGTTGTT TTGAAAACAAGATAAGCTTATCCAAACAAACACTAAATCTTTGGGTGTATGTAACGGCGGTGCAGGTATTTTATCTGGAG GCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGATATCAATATCTATGCAACAACAGCTTCAAACGCAGA AGAAAGCAGTTGGGGAACCTATTGCCCTGGCGAGTACCCTAGTCCTCCCCCAGAATATACAACCTGCTTGGGTGATCTGT ACAGTGTTGCTTGGATGGAAGATAGGTATGTGCATAATAAAGGAACATAATTATATCATAAATGAGTTTATTTAACGTGA TGAAATACTTCTTATACCCATGCAATTACCATGAAGTAGTTAGTTCAATGCCTGTTTCTACTGCGTCTTGTGTGTATCTT CATGAGAGTTTTATATGCCTGTCTTTGTACTCTGAAACAATTTCTTATAATAAATTATTCTCAATTATTTTAATTTCCAC TTGCAGCTTTTCTTAATTAGACCTGAAGGTTTTTTGAATAATTAGTTTTGTAAGATTTGTTTGTACTAATTTAAATCTTT CTTTACTTGTGAGCAGTGATATACACAACCTGCGAACAGAATCCTTGCACCAACAATATAAATTGGTAATAACTTGTTGC TAACTTGATTTTCTCTAAATCCACTGAGATTTTTTAGTCTGCTTTTGTTGAATTCTTGGTCTAACACCACGGGTAGAAAA TGTGGTAAGAATTATGTGATTGATGCCTTCTTTACTCCTGTGCTTATAGGTTAAAGACAGGACTATCAGTGGAAGTGAAT ACTATGGCTCTCACGTGATGCAGTATGGTGATATAGGTCTTAGCAGCAATCATCTCTTCCTATATTTGGGAACAAATCCT TCTAATGATAATATTACTTTTGTCGACGAAAACTCCTTGAGGACACCTTCAAAAGCAGTCAACCAACGGGATGCTGATCT TGTCCATTTCTGGGATAAGGTATCCTATATGTGCGCAGTATTTTTCCTCTTAACTTATGAATTAGTTGCTTAATCATTTT TTCATCAATGATTTGACTTTCAAATTTTATACTTCTGGTATATACATTATTGGGATATATTTGTCATTGAGAGGCAAAAT CTCATGACTGGATAGAAATTCAGTGGCAACCAGTGTGGATATGTTTAATGAGTATTTCTCTGCGGTAGGACTTTCACGCT GTTGTCGCTATCCTTGTTTTCTTCCCTTGAATTTTGGTGCTTAATGCTAAAACAACAAGAGAATAAGGGTGTTCTTATCG GATTACTTGTACTTCATGCTGTAGCTCTTCAAAATTTTCCTATATGTTTCATCTCTTGACTTCGTTGTCACTATTTATGC CAGTTCCGCAAATCTCCTGAGGGTTCTCGAAGGAAAAATGCAGCTCAGAAACAAGTTCTGGAAGCAATGTCTCACAGAAT GCATGTAGACAACAGTGTGGAGCTTATTGGAAAGCTCTTGTTTGGCATTGAAAAGGGTCCAGAAGTGTTCAAATCTGTTA GACCTGCAGGATTGCCACTTGTTGATGACTGGGTCTGCCTGAAAAACATGGTACCGTTTCCCCTGTTTCAACTTCATCTC TTCTAATGCTGATATAGTGATTTTTCTTTTTTGATCATAATGTAGAATTTGATTCATTGTTTTTCTGCTTGAGCCTAGGG GCAACGATAGAGTTGTGCCTTTTGATTGCGTAAATATTCACAGTATGAGACAATAACAACGGAATTGGCATTTTCTTTTC TTATTACTGTAAAGCATTTTGCTTTTCACTTTGGTTCATGAGAAAATTTAGCACCTTGATCTATTTTGAATGCAGGTAAG GACTTTTGAGACACATTGTGGATCGCTGTCTCAATATGGGATGAAACACATGCGGTCTTTTGCGAACATCTGCAATGCAG GAATACAGAATGAGCAAATGACTGAGGCCTCCTCACAAGCTTGTGTCAGTGTTCCTGCTAATCCCTGGAGTTCTCTGCAA AGGGGTTTCAGTGCATAGTTCCTAAAATGCACACTTGTAAAGACCAAAGCACAATGCTGCTACATTATGTTTCATGGCTG TATATACATGTTTATCCTGTTCATCATTTCTCGTCCTGCCTCTGTAAATACAAATAGGACGCGCTGCATCTACGTTTGTG ATCCAGTTATTTGGTTGTATCATAGCAAGAAAAGCAATTTCAAGGCATGGTGGCTTTGGCATACAGAAGGATAAAGGACC AATAGCTTTGGAATCTCCTGTGATTTTATTGAGGAGGCAATTGGCAGATATGGTCTTTACCTTGGCGCTTTGCAGCAGAA TTGACAACCCTTTGTATAATTAATTTAGAAGAATTGTAATATGTGGTAGACTTATTGTTTAATATTTTAATATTGATGTT GAACTAGAACATCGTATTTGTTGCTGTATAATATTGGAACTGCATTACACTTTGGTGCATTTGCAACCGAATGATTATGA TGGAGTATATCTATTTTATTTTATTACAAGTTGTGATTGAGGTCAAGATAAATTAAGATCAAGATTGCAGTTCAAGAAAG ATGAA
CDS sequence (LotjaGi5g1v0040100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATCTTCTCAATTTCCCTCCCTTCTCTTTTTCCTCCTCACCGCAGCCTTCCTCGCCGTCGCCGCCGCTGGCCGTGA CCTCACCGGCGATCATCTCCGCCTTCCCTCCCAAGCAGAAAGATTCTTCCGTGAACCCGAGAACGATGACAACGTTCAAG GGACTAGGTGGGCCATCTTACTTGCCGGTTCCAGTGGCTACTGGAACTACAGGCATCAGGCTGATGTTTGCCATGCCTAT CAAATCCTGAGGCAAGGTGGCCTGAAAGAAGAAAATATTATTGTTTTCATGTATGATGACATTGCTTACAATGAAGAGAA CCCTAGGCAGGGAGTCATCATTAACAAACCAGATGGGGGTGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGAGCAG ATGTTACTGCTAGCAACTTTTATGCTGCTTTACTTGGAAATAAGTCCGCTCTTACTGGCGGCAGTGGGAAGGTTGTGGAT AGTGGCCCCAATGATCATATATTTGTATACTATACTGACCATGGAGGTCCAGGGGTGCTTGGGATGCCTGCTGGTCCTTA CTTATATGCAGAGGATCTGATTGAAGTCTTGAAGAAAAAGCATGCTTCCGGAACATATAAAAGCCTAGTATTTTATCTGG AGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGATATCAATATCTATGCAACAACAGCTTCAAACGCA GAAGAAAGCAGTTGGGGAACCTATTGCCCTGGCGAGTACCCTAGTCCTCCCCCAGAATATACAACCTGCTTGGGTGATCT GTACAGTGTTGCTTGGATGGAAGATAGTGATATACACAACCTGCGAACAGAATCCTTGCACCAACAATATAAATTGGTTA AAGACAGGACTATCAGTGGAAGTGAATACTATGGCTCTCACGTGATGCAGTATGGTGATATAGGTCTTAGCAGCAATCAT CTCTTCCTATATTTGGGAACAAATCCTTCTAATGATAATATTACTTTTGTCGACGAAAACTCCTTGAGGACACCTTCAAA AGCAGTCAACCAACGGGATGCTGATCTTGTCCATTTCTGGGATAAGTTCCGCAAATCTCCTGAGGGTTCTCGAAGGAAAA ATGCAGCTCAGAAACAAGTTCTGGAAGCAATGTCTCACAGAATGCATGTAGACAACAGTGTGGAGCTTATTGGAAAGCTC TTGTTTGGCATTGAAAAGGGTCCAGAAGTGTTCAAATCTGTTAGACCTGCAGGATTGCCACTTGTTGATGACTGGGTCTG CCTGAAAAACATGGTAAGGACTTTTGAGACACATTGTGGATCGCTGTCTCAATATGGGATGAAACACATGCGGTCTTTTG CGAACATCTGCAATGCAGGAATACAGAATGAGCAAATGACTGAGGCCTCCTCACAAGCTTGTGTCAGTGTTCCTGCTAAT CCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCATAG
Protein sequence (LotjaGi5g1v0040100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSQFPSLLFFLLTAAFLAVAAAGRDLTGDHLRLPSQAERFFREPENDDNVQGTRWAILLAGSSGYWNYRHQADVCHAY QILRQGGLKEENIIVFMYDDIAYNEENPRQGVIINKPDGGDVYEGVPKDYTGADVTASNFYAALLGNKSALTGGSGKVVD SGPNDHIFVYYTDHGGPGVLGMPAGPYLYAEDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEDINIYATTASNA EESSWGTYCPGEYPSPPPEYTTCLGDLYSVAWMEDSDIHNLRTESLHQQYKLVKDRTISGSEYYGSHVMQYGDIGLSSNH LFLYLGTNPSNDNITFVDENSLRTPSKAVNQRDADLVHFWDKFRKSPEGSRRKNAAQKQVLEAMSHRMHVDNSVELIGKL LFGIEKGPEVFKSVRPAGLPLVDDWVCLKNMVRTFETHCGSLSQYGMKHMRSFANICNAGIQNEQMTEASSQACVSVPAN PWSSLQRGFSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 4 | 491 | 488 | 0.0 | ||
| PIRSF | 4 | 491 | 488 | 1.8E-241 | ||
| PIRSF | 4 | 491 | 488 | 2.5E-243 | – | |
| PANTHER | 4 | 491 | 488 | 0.0 | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 491 | 467 | - | – | |
| Gene3D | 54 | 350 | 297 | 4.8E-137 | – | |
| Pfam | 56 | 326 | 271 | 5.6E-113 | ||
| PRINTS | 57 | 81 | 25 | 3.5E-56 | ||
| PRINTS | 82 | 111 | 30 | 3.5E-56 | ||
| PRINTS | 129 | 144 | 16 | 3.5E-56 | ||
| PRINTS | 157 | 176 | 20 | 3.5E-56 | ||
| PRINTS | 206 | 222 | 17 | 3.5E-56 | ||
| Gene3D | 352 | 477 | 126 | 4.1E-15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Peptidase activity | Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid. |
Expression pattern of LotjaGi5g1v0040100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…