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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0045600 |
| Transcript ID | LotjaGi5g1v0045600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanine nucleotide-binding-like protein; TAIR: AT3G07050.1 GTP-binding family protein; Swiss-Prot: sp|Q9M8Z5|NSN1_ARATH Guanine nucleotide-binding protein-like NSN1; TrEMBL-Plants: tr|A0A151SZX0|A0A151SZX0_CAJCA Guanine nucleotide-binding protein-like 3 isogeny; Found in the gene: LotjaGi5g1v0045600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:7704447..7709564) extracted from Lotus japonicus Gifu genome v1.2.
AACAAAAATTTAATTTAACGTTGTCTGCAGCAACCTTCGAGCCACCGCCTCCTCGTTGAGGCTCCTCTCCTTAACGCTTC ATTCCATTCCATTGCCGAAAATGGTGAAGAAGAGCAAGAGTAAGCAAACTGGATTCCTCTCACTTCGATTCCATCTAGAT AATACGAATGTTTGTTTGTTTGTTTCTAATTACTTGAATGAATGAATCTTTGGTCTGTTGCAGAGAGTAAGAGTAAGAGG GTTCCATTGAAGAAGAAGTATAAGATCATAAAGAAGGTGAAGGAGCACAAGAAGAAACAGGCCAAGGAAGCCAAAAAGCT TACTTTGAGTGGCAAGAAGAAGGTTGAGAAGGATCCTGGTATTCCCAATGATTGGCCCTTCAAGGAGCAGGAGCTCAAGG CTCTTGAAGCACGCCGAGCGCGCGCTATTGATGAATTGGAGCAGAAGAAAGCCGACCGCAAAGAAAGGGTAATTTATTTT TCACTCTATCAATGCATTTTTAAAGAAACTTGATTGGTTTTGATTTGTCATGGTTTTTGAAGAATTGAAAGAAAAAAAGG GAATAATTGGACTTGAAGTAGACTTTTTAGTGTAATTGGTTTTATGGACCTTAGGTTTTTTTGTGTCCTTATTTACTTAT GATATGAACTATTAGGGTGTGTTTGGATTGCGGTCACGGTCATGGGCCTTCGTATTGCGGAAAATTGTGAACTAACGTGA TTGTCGCGGCTGAAATCACGGTTGCGGACCTTGATTTCAAACCATGGAAGGGAAGGGAAATAACCTGGTGCTTTAAAGCC TTATGCCAGGTAAGGTCTAGGGAAGGTCGAACTTGTTGTGGGTCTATTGTAGGTTGCCTTATGCGCTTAGCAGGCATTTG CCAGAGGTTAATTCCTTGATTTGGACCTATGACCTTGCTGTTACATGGTTGTGAACCCTACTGTTGCCCTCAAGGATTGT TTTCAAAGGGGAGGTAGAATGAATATTTAATTTTAGAAGCGAGGGTTGTATGATTTTAGGAAAATGATTGGTTGTGGTTT GTTACGGTTTGTATGCAGTTCTAATGATTTTCATTTTTTTTATATTTTGAAACTTAACTATGTCTAACTCTTGTTTCAGG CTCGAAAAAGGAAATTGGGGTTGCTAGAGGATGATGATAGCTCCAAGGTGGTTGATAGTAATGAAAACACTACTTTTGTG AAGACCAGAGGTGTGTTTTTATTAATGAGCTAAAAAATTGGTTTAGGCCAAATATTTGTTTTTCCTTCACTTTTAGCATT CTTGTATATTTATTGTATTCTTATGTATTCTTTTGCCATAGATACCTCTGATAAGGCCTTTTACAAGGATTTGGTGAAGG TCATTGAAGCCTCTGATGTCATACTAGAGGTCCTTGATGCCCGAGATCCCTTGGGTACCCGTTGTGTTGATATAGAGAAA ATGGTGATGAAAATGGGACCTGATAAACATCTTGTGTTGCTTTTAAACAAAATTGGTAACTTATATGCTTACATTTTCCC CTCTTTTCTCCTTTTAGTAATATTTTTATATTTACATTGACTAACCAATAGTGCTCTTGACTTAGATCTTGTCCCTCGAG AAGCTCTCGAGAAGTGGCTCAAATACCTTAGAGAAGAATTGCCTACTGTGGCTTTCAAGTGCAGCACCCAGCAACAAAGA TCAAACCTAGGGTGGAAATCTTCTAAAACAGCCAAATCAAGCAATACTTTGCAACTAAGTGATTGTCTTGGAGCTGATAC TCTCCTCAAATTGTTGAAGAATTACTCAAGAAGTCATGAGGTAACATATAACAACGATATTTTTTATTCCAAGTAGTGTT TTTTCTTTTAATGTTGTGTTGAAGAAAAAAAGGTATTCCATTATATTCTTACTTTCTATTCTACTGGGTTCTAAACTACA TTTAAATCTTTTAAGTTGGAATGTCTCCTTCAAGTGTTATTGCCACCATTGGGGATTTTGCATGTGACTGATTATTTTAT TTTCCCCTAAAAACTTGCAGCTTCTCTTCTAGTCTTAGTGCTTATCTGTAAATTGTATTTTTTTAATTCTATGTTTGTTT ATTTGATTTGAGATCATTCATTGCCAATCTTTATTTATTTTGCATCCTTCTCTTGACAGATCAAAAAGTCAATCACTGTG GGTTTGGTTGGCCTGCCCAATGTTGGTAAGAGTAGTCTTATTAATAGCTTAAAGAGATGCCATGTTGTCAATGTTGGTGC TACTCCTGGGTTAACAAGATCAATGCAAGAGGTTCAATTGGACAAAAATGTTAAATTGCTGGATTGTCCTGGTGTCGTTA TGCTGAAGTCTAAAGAAAATGACAGTTCTACCGCATTAAAGAATTGCAAGAGAATTGAGAAATTAGAGGATCCAATTAGC CCAGGTATTTGAAGGCATTTCTTACTAATTAATCTGCTTATTTAAGTCCTGTGTATTGGAGTAAAACAGTTGAAATGGTT GGTTGAAGCTTTATTTAAATTTAATGTAAATAAAATAGGAAAGCAGATGACCTTGCAACATAAAAGAAATACACTCGTGT CTTTTATGAAAATGTGTAATTTGTGCTATTCTTTGGTAAGTTTGGCTTAAACTTGTTATATGATAACATTATGTCCGTTG CTTCTCTTTAATGTTATGCTCATGGCAGTTTTCAGTTTTCACTAGTTGCTATTGGTCCCATGTTACATAGTTGTTTTTTG TTTTTTTAATATTTTGGCGGATATCTTATCTTCCACACATCCCTCCATTTGTCGAACATAATTTCTTATTTCTTATTAGT TTATAGAAAAACTCAAATTTTAGTTACTAGAGTCCTTCCTCTGTAACCAAAATAAAAAGTAACCAAAAAAGAGTCCTTCC TCCAGACCCTAGAATACTTGAAAGATTCTTTTTGTAGCTTAGTGGAGCTTATCTACTAGAAAAAGTACATATAAGCGCCC ATAAGTGCTCTTTGCTCTGCATTCAAATGGGCTCAATATCAAGAAAGAAATCATATCTTTATTGCCTGCTTTCTTATCTT AAACCCTATACTTCAGTTTTCAAGGTAACAATGGCATCACTTGATCCATGTAGCCCTAGAGATTTTGCAATTGGCATGAG AACTGATATCTAATTCTAATAAGTATCATTATTATGGGAAATCTTACAATTGACTGGCCAATTCAAAGTGTAGAATATAT TGATTAAATATAGAATCAACTGAACCACAACTAGTGGGAGAAATGCGTTTATTACTTTAGCCAAAATTGTAAGAGTTTGG TTTAGTTCAGGCTTTTCTTTGCAATTATAAATGGAGTTGTCGAGGTCAGTCCGCCTCCTGCAAGAGTTTGAATGTCGGGA TGCAAATTCTGTTATCAATTCTCATCTCTTACCCTGTTAGTAGAAAATTATGTAAGATGTAAACTATGGAACTTTTAGGT GTTGAAGTCGAATATGGGATTTCTCTAAGCATGTACCTTTAGATCTCCACAAAAAATGCTACTCTGCCAAAATTTGTTGT TTTAAAATAACATGTTTGTAGCATGCTTCTGTTACTAGATATAAATTGAAGCTCTATATTTTGAAGTCTACTCAAGTGCT TTGAAGTTTGTACCAAACAGTTTTTTTGTATTTATGGGAATTTTAATTTGAAATCCTGTGTCCTTCTTCGTGGACAATGC AGTGAAGGAAATTCTCAAGCTTTGCCCGTCCAGGCTGCTGGTTACTCTTTATAAGATTCCAAGTTTTGATTCTGTTGATG ACTTCCTACAGAAGGTCTCAACAGTTAGGGGCAAGCTCAAGAAGGGTGGAATAGTTGACACTGAAGCTGCTGCCAGAATT GTTCTTCATGATTGGAATGAAGGTATACATAATGAAATTTGTTAGAGCATAAACAGAGAGAAAGGGCAAAATGTTTCTTA TGATATTGAAAATTAGAAACAACTTGATACTTCATTAACTTGATATAAATGTCTACTTGCATCGTTCAGGTAAAATTCCA TATTATACCATGCCCCCAGTGAGGGATCAAGGGGAACTTTCAGAGGCCAAGATAGTTTCAGAGTTTGCTAAAGAGTTTAA CATTGATGATGTCTACAATAGTGAAACATCATTTATTGGGAGCCTTAAATCTGCTGACGCCTTCGATCCTGTTGAAGTTC CGTCAAGTGGCCCTCTCAACCTTGATGAGGCGATGCTAGAGGTCTGTTTTTTATGTTGCTGTTTTAAAAACCTTATAAAT AGGGAGAAAGTGCTTTGGAAATGACATTGTTTATCTTATTCTTCACTCAGTTTTACCCTTTACAATTTACCAATTAAAAC ATCTTATCTTCTTACAAGCTATTTTTTTCTTTCTAGGATGATCAGCAAGTTAAACCGTCAGAACAAGAGGATCCTGAGAA CATGGCTGACAATGATAGTGATGAAGCTATGGAAGATGATAATGGTGATGCTAGCAAGAACAAGGGGAACAGTGCAGCTA GTAGACAAAATGAGAAATTATATACAGCCGATGGTATACTTAATCCGAAACTTAGGCGAGCAGAGAAGAAGAAAAGGAAA AAGGATAAAAAAGCCACATCAGATCCCATGGATGATGATTATGACTTCAAAGTTGATTACTTCAAAAAGGGATCCACAAT GGATGCTGAAGGGAGCAACAATGAGGATGAAGATGATGAACAAGTCAACTCTGAGGTGCCAATGTCTGGTATTCAGGTTG ATGAATGATTGGTCACCATTGAATCTTTATTAAGTTTTTTTTTTACTTCATTTTATTTACTATCCAGTATTTCTCAGGCT CGTTTTTTTCTTAGTTTAGTCGTGTTATATAGCATAACTGCTGAAAAAATATATCTATATTCGCTTCTGAACCCAGGAAA GGTGGCAATTTTGAAACACGTATACTAGTCTGTTTTCTTAGGAGAGATATATGAATATTTGTACCAGCTATTTGCTGTTT ATTATCTATCTTGCATATAGTTTTCATTATCGTCTAATGGTATTTTTTTTCTGTTAATAATAAAGCAAATTGTGAATGAT ATGTAACCAAAAAAAAAATTGTGACTGATATTATAGTGTTAAACTATGTGAATATAAATTAAATTTGATGACACAAAC
CDS sequence (LotjaGi5g1v0045600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGAAGAGCAAGAAGAGTAAGAGTAAGAGGGTTCCATTGAAGAAGAAGTATAAGATCATAAAGAAGGTGAAGGA GCACAAGAAGAAACAGGCCAAGGAAGCCAAAAAGCTTACTTTGAGTGGCAAGAAGAAGGTTGAGAAGGATCCTGGTATTC CCAATGATTGGCCCTTCAAGGAGCAGGAGCTCAAGGCTCTTGAAGCACGCCGAGCGCGCGCTATTGATGAATTGGAGCAG AAGAAAGCCGACCGCAAAGAAAGGGCTCGAAAAAGGAAATTGGGGTTGCTAGAGGATGATGATAGCTCCAAGGTGGTTGA TAGTAATGAAAACACTACTTTTGTGAAGACCAGAGATACCTCTGATAAGGCCTTTTACAAGGATTTGGTGAAGGTCATTG AAGCCTCTGATGTCATACTAGAGGTCCTTGATGCCCGAGATCCCTTGGGTACCCGTTGTGTTGATATAGAGAAAATGGTG ATGAAAATGGGACCTGATAAACATCTTGTGTTGCTTTTAAACAAAATTGATCTTGTCCCTCGAGAAGCTCTCGAGAAGTG GCTCAAATACCTTAGAGAAGAATTGCCTACTGTGGCTTTCAAGTGCAGCACCCAGCAACAAAGATCAAACCTAGGGTGGA AATCTTCTAAAACAGCCAAATCAAGCAATACTTTGCAACTAAGTGATTGTCTTGGAGCTGATACTCTCCTCAAATTGTTG AAGAATTACTCAAGAAGTCATGAGATCAAAAAGTCAATCACTGTGGGTTTGGTTGGCCTGCCCAATGTTGGTAAGAGTAG TCTTATTAATAGCTTAAAGAGATGCCATGTTGTCAATGTTGGTGCTACTCCTGGGTTAACAAGATCAATGCAAGAGGTTC AATTGGACAAAAATGTTAAATTGCTGGATTGTCCTGGTGTCGTTATGCTGAAGTCTAAAGAAAATGACAGTTCTACCGCA TTAAAGAATTGCAAGAGAATTGAGAAATTAGAGGATCCAATTAGCCCAGTGAAGGAAATTCTCAAGCTTTGCCCGTCCAG GCTGCTGGTTACTCTTTATAAGATTCCAAGTTTTGATTCTGTTGATGACTTCCTACAGAAGGTCTCAACAGTTAGGGGCA AGCTCAAGAAGGGTGGAATAGTTGACACTGAAGCTGCTGCCAGAATTGTTCTTCATGATTGGAATGAAGGTAAAATTCCA TATTATACCATGCCCCCAGTGAGGGATCAAGGGGAACTTTCAGAGGCCAAGATAGTTTCAGAGTTTGCTAAAGAGTTTAA CATTGATGATGTCTACAATAGTGAAACATCATTTATTGGGAGCCTTAAATCTGCTGACGCCTTCGATCCTGTTGAAGTTC CGTCAAGTGGCCCTCTCAACCTTGATGAGGCGATGCTAGAGGATGATCAGCAAGTTAAACCGTCAGAACAAGAGGATCCT GAGAACATGGCTGACAATGATAGTGATGAAGCTATGGAAGATGATAATGGTGATGCTAGCAAGAACAAGGGGAACAGTGC AGCTAGTAGACAAAATGAGAAATTATATACAGCCGATGGTATACTTAATCCGAAACTTAGGCGAGCAGAGAAGAAGAAAA GGAAAAAGGATAAAAAAGCCACATCAGATCCCATGGATGATGATTATGACTTCAAAGTTGATTACTTCAAAAAGGGATCC ACAATGGATGCTGAAGGGAGCAACAATGAGGATGAAGATGATGAACAAGTCAACTCTGAGGTGCCAATGTCTGGTATTCA GGTTGATGAATGA
Protein sequence (LotjaGi5g1v0045600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKKSKKSKSKRVPLKKKYKIIKKVKEHKKKQAKEAKKLTLSGKKKVEKDPGIPNDWPFKEQELKALEARRARAIDELEQ KKADRKERARKRKLGLLEDDDSSKVVDSNENTTFVKTRDTSDKAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIEKMV MKMGPDKHLVLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSDCLGADTLLKLL KNYSRSHEIKKSITVGLVGLPNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSSTA LKNCKRIEKLEDPISPVKEILKLCPSRLLVTLYKIPSFDSVDDFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWNEGKIP YYTMPPVRDQGELSEAKIVSEFAKEFNIDDVYNSETSFIGSLKSADAFDPVEVPSSGPLNLDEAMLEDDQQVKPSEQEDP ENMADNDSDEAMEDDNGDASKNKGNSAASRQNEKLYTADGILNPKLRRAEKKKRKKDKKATSDPMDDDYDFKVDYFKKGS TMDAEGSNNEDEDDEQVNSEVPMSGIQVDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 568 | 568 | 0.0 | – | |
| PANTHER | 1 | 568 | 568 | 0.0 | – | |
| Pfam | 16 | 91 | 76 | 6.4E-17 | ||
| MobiDBLite | 26 | 56 | 31 | - | – | |
| MobiDBLite | 34 | 56 | 23 | - | – | |
| Coils | 64 | 84 | 21 | - | – | |
| SUPERFAMILY | 123 | 355 | 233 | 7.11E-39 | ||
| ProSiteProfiles | 126 | 310 | 185 | 41.499 | ||
| Gene3D | 126 | 310 | 185 | 1.9E-47 | – | |
| CDD | 137 | 307 | 171 | 6.227E-112 | – | |
| PRINTS | 255 | 275 | 21 | 2.5E-7 | ||
| Pfam | 255 | 319 | 65 | 1.9E-14 | ||
| PRINTS | 301 | 316 | 16 | 2.5E-7 | ||
| Gene3D | 326 | 399 | 74 | 1.0E-9 | ||
| MobiDBLite | 468 | 590 | 123 | - | – | |
| MobiDBLite | 536 | 559 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi5g1v0045600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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