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LotjaGi5g1v0046400.1

Overview

Field Value
Gene ID LotjaGi5g1v0046400
Transcript ID LotjaGi5g1v0046400.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Polyamine aminopropyltransferase; TAIR: AT5G19530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9S7X6|ACL5_ARATH Thermospermine synthase ACAULIS5; TrEMBL-Plants: tr|I3SH85|I3SH85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0046400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:7866892..7873192) extracted from Lotus japonicus Gifu genome v1.2.

AACATTTTTAAACACCATAATTGCTCGTGTCACCCCTAATACCACATCCTAATGGGGTACGCAATTAGACTATTAATTAA ATACTATCCATCATCCCGTAGCTATAAAAGGCGAGTGCTGCCCACTATTACCACACCCTGCAATCCCATCACTGTATTGC ACTTTACAACATCCAATTCTCTTCATACCTCTGTCTTCTCGTTTCCTTTTCCAACCATGGGTGAGGCTCCAGAGGTTTTC TACATCAATGGGTTCTCAAAGTTTGGCCATGAAACTCAACAAAACAATGGTAACCACCAGAACCATGACTCTACCTGGTA TGAGGAAGTCATTGATGATGATCTCAAATGGTCTTTTAAACTCAACAGGTTCGTCCTTCATTAGTTCGTCCTTCATTAGT TCAAATCAATGTAAATATCAGTAATGCACAAAGATTTATTTTAATTTATATTAAGTGTATGTTTGAAAAGGCAAGTCTCG GCGCAAGAATTAAGTTGTTATCATGTGACTTTTTAGTCACGGGTTGTCTAAATGACCCATGATAAAGTTTAGGTTAAATA ATTCATCATCCAATCACATTGAAGATCAACTCATTTATCTCCAATGTGATTGGATGATGAGTTATTTAACCCGAACTTTA TCATGGGTCATTTAGACAACTCCTTTAGTCACACGTTTGAGCCGTGAAATCAGAAACTTCAAAAAATGTGAGATAAGATT ATGTACATTAGATCCACAATATAGCATAATATTTGCCATGTTTATATTAAGTGTATCTATGATTTCCTTACACAAACATT AAACAAGATTTTGACACCTTGACTCAAAGATCCGTGTTGAATATACAGTAAGTTTATAATAGATTGTGTTACTGCTCGAA AGATTCCATTTGCTCTGTTTTTCCATATAGATTAATTTTGTTTTGTTTAGTTACACAAACTCATTCTTTTTATCTTTTTT TTTTCCTGATAATTTTCAACAGCGTGCTCCATGAAGCGATTAGCGAGTACCAGGACATAGCTCTTTTAGATACAAAGCGT TTTGGAAAGGTTTGCAAGCCCTGCTAGTGCTTCTAATAGGAGCTCTGTTTTTCATTCTCCATTTACATAATTCTAGTATT GAAAAGCAAAGGGAGGAAAAAAAGGTTTCAAATGATAGTTGTTGTTATGTATGTGATGTTTATTTGAATATGATGCATAT ATATAGGCCTTGGTGCTTGATGGGAAGATGCAGAGTGCTGAAAATGATGAATTCATTTATCATGAGTGTTTGATGCACCC CCCTCTTTTATTTCATCCCAAGTAAGTATTCACTTTCTTATTTAACATAACATTATGTTAAAAGGAAAATACTGTATTTT TTTTAGTACTTAACATGTAGAGTTCAAGCAAGTAGTTGATTCAAGTGATACATGTTTGATTCTCATAAAATAAGGTATCG AGTTTGAGTTTAGTGAATGAAAAAAAGTCTCCTCTAAAAGAGTTTGTTTCACCATAATATAAATAGGGTTAATCATCTAC TTGGTCCCTGTGGTTGTGTGGCCGTCTGAAATTAGTCCCTCCCCGAAAAATCTGAAAATCTAAGTCCTCGTGTTTGGAAA GTGTGTGGAAATTAGTCCCTCCGGCGAGGACCTGCTACACACACTTTTTCAAACGCGAGGGCTTAGATTTTCAGATTTTC CGGGGAGGGACTAATTTCAGACGGCCACACAACCACAGGGACCAAGTAGATGATTAACCCATATAAATATTATCAACTCA AACAGAATTGGCTTGGTTGATGAAACTTGTATTATACCAACAAAAAAAACCTTCTAAAAGTGCTTGTTTATCTTAAGACA TTTAATGAAAGTGAAGTTGAGAATGTAATATTTTCATATTTCGTACAAGCTTAAAAAATTTATTTTTTAGTAATATAAAT TCTCAGTCATGTAACTTGACATGTTTTCTTTAAATGTCATTTTCATGTCATGAGAATCTTATAAAAATTATATCCGACTA ACAATTCCTTCTACTACAAATTTTATATTTTTCAAATTTTTAATTATATAAATTTTAAAAACATTCCCTGAAAAAGTATA CAATTACAGCACATATTGCTAGTGATCACAAAATCAAACCACATATGTGTATTTGATGACTCATGTCAATTCACCATTCT TACTAACAATTCTGTATTTCTTGTACTCTCTTAATAAAAGTTAGTTGCAAGATTACAAATATCTTCCACTTGATTATGCT TATGCTTTCTTGGTGGACTTAATTAGGTTGTATTTATTTCATGAACCCTTTGACTAATATGAAGAGGCATGTGTTAATGG TTTGGCAGCCCCAAAACGGTGTTTATAATGGGAGGTGGTGAAGGGTCTGCAGCAAGGGAGGCCCTCAGACACAAGTCAAT GGACAGAGTAGTCATGTGTGACATTGACAAGGTTACTACCAATATAACTTCTCAACCGTCCCTTTAATTGAAAAGTTTAC AATATCCATATCTTTTACAAGTTTATCATATCCATTTAATTAATAAAACGAATTCCATTTTTTTTCTTAAAAAAATATAA GCTGTGCATATATATAAAAGCAGTGAACTATAAAATATTAATAATGACTATCGGATTTCAAACTAGGGTTAAGTTCCTCA AAAGTTTTTCTTTTTCTTTTTTAGGATTCTTCAAGTTGAAATATATTAATATTTAATAGTGAAGAGATTAAGCTCGAAAA GACAGAGGGATAACAAAAACAAAAACTCCAACCATCCACAAGAATGCACAATCGCTTAATCAATCTAAAAAAAGAAAACA ACTACCAAAAACCACAATATATGAAAGAAGGAACCCAAGGAAGCAAAGCTCATGACCTAAAACCAAAACCAAGAGCGACA CATACACTTAGGGTGGCCACTACTCCTTCATTTCCTCTTCCAGGCTGCGGATGACCGCCTCATCCCCACATCAAATGTAC AACCCAAAAACATGCCAATAAATCACGTCTTCTTGGCTCGCGTCCAATAAGTTCATCAAAAGTTACATATGAATTTTATA AGATTATATGTTAAATAATAATTTAGTTGATTAGAAAATCAACCATTTAATTTTGATCTAAATTTTACATAAAAATGTTA TTTGGAAAAAACTTCGGGTACTGTTTAAGTTGCGCAATGAAAAGCAATCCACTTTCTTAGTTTATTAGTGTGATCATTTT TTACTTTTTAAACTCGTGTGTTATGTTAAGATTGGACAGCAGTAAAACCAGCATTATAGAACTGCATTTAACTTTTATCT ATACTATTTTATCACATTTAAAAAAGTTATGATAGGTTAAAACTTCAATTTCTCTTATGGTTTATTTTCACTTAGTTTTA CTCCATATCTCTCTTTTGTTTTTATCATATTATTTATCATATCACTGATTTCTCGTACTCTATTTTTAGATGTACAACGA AAAAATGGGAACATAACTTAATTTCATATTAAATAGCTAACTAATATTTTATCATTTAAAGTGTGTAACCCCTCCTTAAG GAATCAAATTGATTACAATAAATGTTTGATGGTTATAAAAATACTTAAAAAACAAACATGTTTGATAGATGACTAAGATG TCAATATCAAAACATGGTCCATTAATAACATATAAATTTATATACTCAAGTTGTTGACCATGCTCAAATTTATGTAATCA CGTTTGGCTTTCTTATTCTTGCAGGTGGTGGTAGATTTCTGCAGAAAATACTTGACCGCAAACAGGGAGGCATTTTCTAA TAAGAAGCTGGACCTTGTCTTCAATGATGCTAAGTAAGAAGCTTGGTCACTTTCTATCTTTACTTATAATTTAGGGGAGC ACAACCTCACATATAAATGCTTCATTTATATTTTTCTTTGTTTCAAACCTTCACACATTTTATTTCAGAATAGAGTTTAG TGAAAATAATAATTTAGGGTCAATTTCCCTCCCTAGGACTCTTATTACTACAACATCATTGTTATCATTTTATTTATCAA TCATCCCTAAATAACGTGGTGGTATTTAAATATTTGCAAATTTGAAAGCAAGTTATACTCACTAAAGGTGAGAACACAAG TTCAGTCACCAGAAAATCATTTATTGAAATAAACAAATATAATTTCTCTAATTTGTGGTGGTGACACATGTCAAAGAAAA AAAAATTACAAATTTGAAATCCGTTAATCAATTAGTTCTCAGTGGCTGATAATCCCTATTATACCAATAATAGTTTAGCC TAATCCATTGAGCAATACACTAGCATAGTTCCTTCTCTTTACTCAGACCAATCATCGTATACCCTTAGAACTCCATTTTT TCCCAAGAAAAAAAGAATTTGTAAAAGGCTTGTCTAGATGACCAAAGGAAAAAAATTGGGTTAAATCAGCACCAATAATA TGTAAGAAAAGTACAATTTCTAATCCAAGTCTTTTTAGGATTATTTACACAACTTCTTTCAAAAATAAACTAACAAATTA TATTCTCTTCAAGAACATGTGTGTTGCCCTTTATTTTCTTCTTGTATTGGTGGATCTCATGGAATCTTAGTCTACAAATA AGTTGAAAATTGCAAATCAAATTTTGTATTGAAGGGCTGAATTAGAGAAGAGAAAGGAGAAGTTTGATATCATTGTTGGA GATTTGGCAGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACAAAATCCTTTTATGAGAAAGTGGTGAAGCCCAA ACTCAATGAGAATGGAATTTTTGTGACCCAGGTAGATTATGAACAACATCCTTGTATGCTGTGAGCAGAATAAGCACTTT ATCTATTTTTTTATTAAATATAACTTTTTTTTTCATTGCACAGGCTGGACCAGCAGGTATCTTCACACACAAGGAGGTCT TCACTTCTATATATAACACAATCAAACATGTCTTCAAATGTAAGATTATCTAATTCAAGTCTTTTGTTCTAGGATTAAAC TTCAGTATCATTAACAGAGTAAACAGAGCACATGGATATTGTGTTTTAATTTTAACTAAGCGATGTTATTGTTTCTTTTG CTTCTGGTGCAGATGTGATTGCATACACAACTCATGTACCCTCATTTGCTGACACATGGGGATGGGTTATGGTATGTGAA TTGAAAAGAAAAATACTTGTTTTTTTCTTCCTTTCTTGCAATTAAGTGCATGTTTCAAATCATTTTACATGCATGTTTTG ATTAACGTTATCACTTATCACAATTGATTTGGAAAAAAATGAAAATCAATTCTAAGGAGAATTTTATGAATAGCTTCAAG ATGTTAGAAATGATTATGAGAAACGAGAAACTATTTCATATATGCTATAATTAAGTATTTAAGCATCTATTTACATATAA TTTCTATGCTTAATACAGGCTTCAGATCAACCCCTGTCAATTAGTGCTGAGGTAATGGACAAAAGGATCAATGCAAGAAT AGATGGGGATCTGCTCTATCTGAATGGTGCTTGGTTCAAATCATCTACCATCATGAATAAGACTGTTTCACATTCGTAAG TACTTGCAGTTCAAATCCTAAAACCAAAGTCCAGTAGCCCTACACAAATTTCAGATCTTTGATAGTCCTAGTTAAATGTA GCATGTTTGTATCAACATTTTTTCTTCAAAATCGATTCTGACACGTAGAAGTTTCTCACTCAAAATTAATTTTAACTTCA GAATCATTTGAAGAAGTACTTCTTAAAATGCACTTAGCCACAACACTATAACTATTCAATGAAAACTTAAGATGCCAATG TCAACATGCTCCCCCTCCATTTGATTTTGACATCAACTGTATCATCATTGTTACAGATTGCAGAATGAAACTCACGTCTA CACAGAAGAAAATGCTAGATTTGTTCCTGGACATGGCATGGCTTATCGCATCTGAAGTTAATTCAAGCCATAGATTGAAG AAAACTATTGCATACTCTCACCTCAAAGTATTGGGTCATACCATGAAGATTAAGTTTGAAGTAAAATATGATCAGGGCAC ATTCAATATTTGTATCACATGCATGTCAATTGCACAGTGTAATCGTAAGGTGTTATTTAAAGTGTGTGAGGATTTGCTGT ACAGAAAACAATAATGGAAGAGCTAGAAAATCAAAAAATAAGCATATAATATCTACATGATTCATTAGAGTATGTAATTG CTTCTTCAACTTGGCCCGCGAAATTTGAGCAAGCTTCACTAATGCTCCAAGGATTAATTAATCAAAGTGATGAACTCATG AATATTACAATGATTTTAAAAATTACAGAAGGCACTTTATCCGCCCACTTTTATATGTCGT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0046400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGGTACGCAATTAGACTATTAATTAAATACTATCCATCATCCCGTAGCTATAAAAGGCGAGTGCTGCCCACTATTAC CACACCCTGCAATCCCATCACTGTATTGCACTTTACAACATCCAATTCTCTTCATACCTCTGTCTTCTCGTTTCCTTTTC CAACCATGGGTGAGGCTCCAGAGGTTTTCTACATCAATGGGTTCTCAAAGTTTGGCCATGAAACTCAACAAAACAATGGT AACCACCAGAACCATGACTCTACCTGGTATGAGGAAGTCATTGATGATGATCTCAAATGGTCTTTTAAACTCAACAGCGT GCTCCATGAAGCGATTAGCGAGTACCAGGACATAGCTCTTTTAGATACAAAGCGTTTTGGAAAGGCCTTGGTGCTTGATG GGAAGATGCAGAGTGCTGAAAATGATGAATTCATTTATCATGAGTGTTTGATGCACCCCCCTCTTTTATTTCATCCCAAC CCCAAAACGGTGTTTATAATGGGAGGTGGTGAAGGGTCTGCAGCAAGGGAGGCCCTCAGACACAAGTCAATGGACAGAGT AGTCATGTGTGACATTGACAAGGTGGTGGTAGATTTCTGCAGAAAATACTTGACCGCAAACAGGGAGGCATTTTCTAATA AGAAGCTGGACCTTGTCTTCAATGATGCTAAGGCTGAATTAGAGAAGAGAAAGGAGAAGTTTGATATCATTGTTGGAGAT TTGGCAGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACAAAATCCTTTTATGAGAAAGTGGTGAAGCCCAAACT CAATGAGAATGGAATTTTTGTGACCCAGGCTGGACCAGCAGGTATCTTCACACACAAGGAGGTCTTCACTTCTATATATA ACACAATCAAACATGTCTTCAAATATGTGATTGCATACACAACTCATGTACCCTCATTTGCTGACACATGGGGATGGGTT ATGGCTTCAGATCAACCCCTGTCAATTAGTGCTGAGGTAATGGACAAAAGGATCAATGCAAGAATAGATGGGGATCTGCT CTATCTGAATGGTGCTTGGTTCAAATCATCTACCATCATGAATAAGACTGTTTCACATTCATTGCAGAATGAAACTCACG TCTACACAGAAGAAAATGCTAGATTTGTTCCTGGACATGGCATGGCTTATCGCATCTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0046400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGYAIRLLIKYYPSSRSYKRRVLPTITTPCNPITVLHFTTSNSLHTSVFSFPFPTMGEAPEVFYINGFSKFGHETQQNNG NHQNHDSTWYEEVIDDDLKWSFKLNSVLHEAISEYQDIALLDTKRFGKALVLDGKMQSAENDEFIYHECLMHPPLLFHPN PKTVFIMGGGEGSAAREALRHKSMDRVVMCDIDKVVVDFCRKYLTANREAFSNKKLDLVFNDAKAELEKRKEKFDIIVGD LADPLEDGPCYQLYTKSFYEKVVKPKLNENGIFVTQAGPAGIFTHKEVFTSIYNTIKHVFKYVIAYTTHVPSFADTWGWV MASDQPLSISAEVMDKRINARIDGDLLYLNGAWFKSSTIMNKTVSHSLQNETHVYTEENARFVPGHGMAYRI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43317
56 391 336 4.0E-195 –
PANTHER
PTHR43317:SF7
56 391 336 4.0E-195 –
Gene3D
G3DSA:2.30.140.10
71 140 70 3.7E-16
IPR037163
ProSiteProfiles
PS51006
87 324 238 97.798
IPR030374
SUPERFAMILY
SSF53335
88 367 280 3.96E-72
IPR029063
Hamap
MF_00198
88 369 282 31.11
IPR001045
Pfam
PF17284
89 140 52 6.5E-14
IPR035246
Gene3D
G3DSA:3.40.50.150
141 392 252 6.9E-73 –
Pfam
PF01564
143 321 179 1.3E-41 –
CDD
cd02440
168 276 109 2.98509E-6 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0046400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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