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LotjaGi5g1v0048000.1

Overview

Field Value
Gene ID LotjaGi5g1v0048000
Transcript ID LotjaGi5g1v0048000.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2C family protein; TAIR: AT1G72770.1 HYPERSENSITIVE TO ABA1; Swiss-Prot: sp|Q9CAJ0|P2C16_ARATH Protein phosphatase 2C 16; TrEMBL-Plants: tr|A0A0B2QFY7|A0A0B2QFY7_GLYSO Protein phosphatase 2C 16; Found in the gene: LotjaGi5g1v0048000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:8058865..8064257) extracted from Lotus japonicus Gifu genome v1.2.

TAAAATAAAAGAAATTGGATCATCTTTCTCTTCCCATTCTAAACACCCACCCACACAACACCACACCCAGGTATGAATAT ATCATATCATATCATATTATATTGTTTATTTAAAGAAAGAAACATGAGTGAAGTGTTATTATTATTTCATGGGTCAAGAT TAAGGAAAGAAAATAAAACACTTTTGTCTTTTTTATGATGTTTTGTTCCTTTTTTTCCCAATCCATGGGTTTCAGGTGTC AAAGTAACAACAACAAGTAACAAGAGAGAGAAAACAGGGGTGGGAACTGGGGAAGGAACCAGACCCTACAGCGTTGACAA TATTAGGTAGTGACTCTACTTCTTCTTCTTTTTCATTATTCTCCCTTTTTTTCTTTCTTTCTCTCATTCATTGATTTCAT AGTAGTAGTAATAACTATAACTATTACTAGTGAGAGTAAACGCCTGTGATGCGTTGCCTCAGATCCAGGCAACTCATGGT GGGTATGTGCACAAAAAAGGGTGACATCTTTTTTGGTTTTTCTTGTGATTCTTGAGACTTTGTACCCTTTTCTCAGCTTC TTTCTCATGACCCTGTTTCTTCTTTCTTGTGTTTAGAGATAAGGGCTGTTATTAATTTTATTTTTTTGAAGTTTCTTTAA ATTTAAATGGTGGGGTTTATTTGTTTTTAGCTCAATATGTTTTTGTGCAGATAAAGTGTTTGTTTTTAATGTTTTTCAGG CATTTCCCTCTCACTGGAGTTGACAAAGGTAGATAGAGGAGTGTTCATAGAAGTAGTTGGTTTTGCTGGAAAAGGGTGTA GCTATTTATGGTTAAAGTTTCCTGAAATGGAAGTTTGAATCAGTTGTTTTTGACCAGATCTGATTAACCCCATTATAATT TCACCACCTTTTAGCTGATTCATGCCTGAATTTGCCTCTTCTCTTGTTTTATAGGGCTGGTTAGGAATGGAAAATGTCAC CCCTCACATTCTAAGATCATTTTTTATCAGAAAAGCAGGTGATGATCAATTAATTGAAGTATGAGAGGTTTCGTGGTACC AGAGGGGTGGGAGGGTAGCTTTTTGTCTTTCATAGATAGGGATTTCAATGGAGGAGGTGTTGTTCATGGTTACGGTGCCG TTAATAGTAGGTAAATCGGTCTGTGATAACTCAACTGTAGTAGCTACCCACATGGATGATGTATCCAGATTTAAGCTGAT CGCAGATGCAGGGTCATTAACTGATTCTGTGACTGAGGTTTCCACTGACAGGGTTATAGGTTCAGACGTTGGTCATAGTG GCGTCAATTTGGATGTTGAAGTTGGTATTGCAGCAGTGACACCGCCAGAACCGGATAGGGTAGGAGATAGTTCTTTGTCG AGTATGATATCGCATGATAAAAGTGCTATGGTTACTAGTGAGGAGGAGGATTCGTTATCGTTGGAAGGTGACCAGTTAAT TGATAGCTCATGCTCTCTATCAGCAATAAGTGAGAACAGTAGTGTCTATGGAGAAGAGTTCATTGGTTCTGATGCTACTT CAGAGTTTGGGACACCATGTTCCATAGACATAGAGAAGAGCATCTGTCCGGTCAATATTGCTGGCCGGACTGCTGATTTG GGAGAGTCAAATGTTGATACTGACATTATGAGTGAATCACATGCCGTGGCAGTGAGCCTTGATGAAGAGACTGGAGTTGG ATCTGGCCCAAACCCTTCTCCAGTTGATCTGTCTCAAGAAAAGCAGGTGAATGTAACAGTTGGTCGGAGTGTTTTTGAAT TGGTTTATACCCCACTTTGGGGATTCATATCTCTTTGTGGAAGAAGACCTGAAATGGAAGATGCTGTTGCAACTGTACCT CGATTTTTGAAAATCCCTATTCAAATGCTAATTGGTGATCGGGTACTTGATGGGTTAAACCAGTGTTATAATCAACAGAT GACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGTTCTCAGGTAAATTTTAATCCAGTTCTTTCTTATCATGATTCTT GTGTCTAATTAGTTAGGCTTTTCTATGTTACCATTTTACATAAAACTTGTTTTGCTCATTCAGGTGGCAAAGTATTGTCG TGAACGTATGCATTTGGCCTTGGCTGAGGAAATAGAATTTGTCAAGGAAGGTCTAGTTAATGGAAGTATCAATGATGACT GTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAAAGTTAATAATGAA CCTGTTGCCCCAGAAACTGTGGGCTCCACTGCTGTTGTTGCTCTCATCTCTTCGTCTCATATTATAGTCTCAAATTGTGG TGATTCAAGAGCGGTTCTGTGTCGTGGCAAAGAACCTCTGGCATTATCAGTGGACCATAAAGTAAGCTGCTTCCGTTTTT GGTTTTATATTGCCTTCAGAATTTTTTGAAGTTTTAAGTGGTGATTTTTGGTTGTGATTTGCTAGCCAAACCGAGAGGAT GAATATGCAAGAATCGAGGCAGCTGGAGGGAAGGTGATACAATGGAATGGCCATCGTGTATTTGGTGTTCTTGCAATGTC AAGGTCTATTGGTATGTGCTTCTTAATTATAAATTTTACTTGATGTGGGTTATCTTGTGTGCCAATTTGAGTTTCATGGA AGTCTTCTTAAACATAAATTTACCTGTTCTTGATACATGTCTATGTTATCTTACTTCACTTGATGTACTTGAAATTTATA AAGGTCAAGTCAAACAGTAATACTGAAAAGGTGAGTCCTCCTAACATTCATTCATTTTAGTGGGCTTTTTTCAAAATTTC GATGAATTGAACGCTAATGTATAAGAGATAGTTACATACTTATATGAAAGTGAACTGTTGGAGTATGTACCTTTCCATTA TAATAGTACGACTACATGTTTTTCCTTTTAATTAATTAATGGGGTGGATATGAATGTGAGGGGAACCATTCTCCCTGAAA ATCACTTCTTGGTTCCCTTCTGATAGTGTTTTGGGAAACTCATTAAAAAAGCATGGTAAAGCCAAAACCATGGTGGACAG AAGCAACTTCCCTTAGCTTTTGCATGTCTAGAATTGATTCTACTCATCCAGACGCAGAACCAAATGTACACTGAGTTGGG AATAATAAGAGGGGAGTATCTTTGTTTATGTTTATTAAGTTTCTCATTTTCAATTTTACCCTATAATTTGGTTTACTTTG AAGTCCATATTGAAATTTCATGCTTATAATTGTTTACCTTTCCCTGTATTCGCTTGTTGATCATCCAAGCATGGGACTGC TTTTTTTTACCATTCCACCCCGTATTTTGTAAACAGCCTAATATCCCTTTGCAATCCAGTCTACTGTAATTACTGGCTAT GAGCCTGTTTGGATGCGGACCAAAGAACACTTGTTGGAGCTTATCTAGTGTTATTTCTTGTAGATAAGCTCCAATTAGTC TGTATCCAAACGAGACCAAGTATCCTGGGAAACAAAAACTAAAATGCTTGGAGTTATAAGATCACATACACTTTGCTTTG GTTTTCAGAATACTGTTTTTGTTAGGTTTTGTTCAGCTAAAGCCCAAATATGAGTGCAGAATAATTTGCATTTAGATATT CGATCCACTTATTTATTACTATAGCTGAAAATTTGCAAATACAAAAGAATTTTTTATGTCTAGAAATAGGTTATGATTAT TTTGCTTGTTCAGGTCATAAGCTGGTAGAAACTTTACCTGTGTAGGAAATTTACATTCGTTATTTCTCAGGCAAAGGCTG CTTCCAGGCAATTTCGAAGTACGAGCCCCAGTGCCTTCTCTCGTCCTCTCCTTTTCATGCTACAACTTTCTGTATTAAAC TGGGACTTAAGCATAAGTTAACACTAATTCTTTTTTTTTTCTGCAAAAAAGCAAAATGACATAGTACATCTTATTGGCCA GAATTGCTATCTTATTGTTCTTTGTATTGACTGTTTAGTTTGTGTTTGTATTTATGTTCAAGTCAGCTAAAGCATATTCA CTGTAATAAAAGAGACATGGATCGGCTAAACGCATATTCAAACTGCATTGAAATGTTTGCTGACAGAAATACAAACACAC CCTCAATATCTCGGATTATGCAAAATTTGCATGATGTTGAGGACCTTCTTGAGACCAGATTTCTCTTCATGTCATTGTCA TTCTTTTTCGCTAGTGATTTTGGCACTTTTTGCTTGTTATAGTAGGATGATATCAGAATTTGGAGATCTTTACTGCTAGA AACCTCTAAACAGAACCACATACTCTAGTTCAAGTATCACTTTTGTTTGCAACTGGGAGTCCTTTAATAATTATGCAGTT TATCCAGCTGAGGTTCTGTGCTTTGCTGTGACTGCCAGGTGATAGATATTTGAAGCCGTGGATTATTCCGGAACCGGAAG TTAGATTTCTTCCTCGTGCAAAAGAGGACGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACAAACGAA GAGGCGTGCGACTTGGCTCGGAAGCGAATACTTCTATGGTACAAGAAAAACGGCTTCGAACTAAGCTCAGAAAGGGGAGA GGGAGTTGATCCCGCTGCACAAGCTGCGGCAGAGTTCCTATCAAACCGCGCTCTACAAAAAGGAAGCAAAGACAACATCA CTGTGATTGTGGTTGATTTAAAACCTCAAAGAAAATATAAGAGCAAGACATGATGATGATTGATGATTTCAAGTGCAGTT TGAAGATTATTTTACTATATAGAAAAAACTTATTATAAAAGCTAATATATTTTTGTTTGCCCGTTAATTTTTTACATGGG CACCTCTTGGCTCAATGATGATATGGCATTTTGTAATACATCTTACCTAGAAACTCAACTAATCAAGAGTCTCCTTGTTC ACTATGTAAGTCTTAGCTGTATGCTGTAGAGATAGGAGACTAGTTCCATGCCTTTGACACCATATTATATTCATTATTAA GCCTCCGAGTACAAAAGCTCTGTGAGGCATTTACTTAATATAATTTTAGTTTGTGTATTTATAAAGAATCAGAAGCTAAT TGATTTGACTTTAAGTTGTTTGTGATTTACTGTAGCAGGTTTTTCTGTAACTGTCAATTATGCAGAATGCTTAGTCCAGA AATATTTATCTATTGTAGATTGGTACCAATGTGTCACTTAATGACCCTATTCACTTAATTTGTGCTGAATTCTGAATGAT TTACATTTTAAATGATTCAAGAGGCTTGGCTTCAGTAAACCAATTGAGGAGACTTGCTATCATGTTGTTAATGAGTACAA TGAACAAACCAGATGATGTCTTGAAAAACAAATGGATGCTATTAGGAGATGGACGAAATAACCACAGAAAAACAAGATGG CTGATCTACTTCAGAATCAATCAAATATAAGTT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0048000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGGAGGTGTTGTTCATGGTTACGGTGCCGTTAATAGTAGGTAAATCGGTCTGTGATAACTCAACTGTAGTAGCTAC CCACATGGATGATGTATCCAGATTTAAGCTGATCGCAGATGCAGGGTCATTAACTGATTCTGTGACTGAGGTTTCCACTG ACAGGGTTATAGGTTCAGACGTTGGTCATAGTGGCGTCAATTTGGATGTTGAAGTTGGTATTGCAGCAGTGACACCGCCA GAACCGGATAGGGTAGGAGATAGTTCTTTGTCGAGTATGATATCGCATGATAAAAGTGCTATGGTTACTAGTGAGGAGGA GGATTCGTTATCGTTGGAAGGTGACCAGTTAATTGATAGCTCATGCTCTCTATCAGCAATAAGTGAGAACAGTAGTGTCT ATGGAGAAGAGTTCATTGGTTCTGATGCTACTTCAGAGTTTGGGACACCATGTTCCATAGACATAGAGAAGAGCATCTGT CCGGTCAATATTGCTGGCCGGACTGCTGATTTGGGAGAGTCAAATGTTGATACTGACATTATGAGTGAATCACATGCCGT GGCAGTGAGCCTTGATGAAGAGACTGGAGTTGGATCTGGCCCAAACCCTTCTCCAGTTGATCTGTCTCAAGAAAAGCAGG TGAATGTAACAGTTGGTCGGAGTGTTTTTGAATTGGTTTATACCCCACTTTGGGGATTCATATCTCTTTGTGGAAGAAGA CCTGAAATGGAAGATGCTGTTGCAACTGTACCTCGATTTTTGAAAATCCCTATTCAAATGCTAATTGGTGATCGGGTACT TGATGGGTTAAACCAGTGTTATAATCAACAGATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGTTCTCAGGTGG CAAAGTATTGTCGTGAACGTATGCATTTGGCCTTGGCTGAGGAAATAGAATTTGTCAAGGAAGGTCTAGTTAATGGAAGT ATCAATGATGACTGTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAA AGTTAATAATGAACCTGTTGCCCCAGAAACTGTGGGCTCCACTGCTGTTGTTGCTCTCATCTCTTCGTCTCATATTATAG TCTCAAATTGTGGTGATTCAAGAGCGGTTCTGTGTCGTGGCAAAGAACCTCTGGCATTATCAGTGGACCATAAACCAAAC CGAGAGGATGAATATGCAAGAATCGAGGCAGCTGGAGGGAAGGTGATACAATGGAATGGCCATCGTGTATTTGGTGTTCT TGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAGCCGTGGATTATTCCGGAACCGGAAGTTAGATTTCTTCCTCGTG CAAAAGAGGACGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACAAACGAAGAGGCGTGCGACTTGGCT CGGAAGCGAATACTTCTATGGTACAAGAAAAACGGCTTCGAACTAAGCTCAGAAAGGGGAGAGGGAGTTGATCCCGCTGC ACAAGCTGCGGCAGAGTTCCTATCAAACCGCGCTCTACAAAAAGGAAGCAAAGACAACATCACTGTGATTGTGGTTGATT TAAAACCTCAAAGAAAATATAAGAGCAAGACATGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0048000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEEVLFMVTVPLIVGKSVCDNSTVVATHMDDVSRFKLIADAGSLTDSVTEVSTDRVIGSDVGHSGVNLDVEVGIAAVTPP EPDRVGDSSLSSMISHDKSAMVTSEEEDSLSLEGDQLIDSSCSLSAISENSSVYGEEFIGSDATSEFGTPCSIDIEKSIC PVNIAGRTADLGESNVDTDIMSESHAVAVSLDEETGVGSGPNPSPVDLSQEKQVNVTVGRSVFELVYTPLWGFISLCGRR PEMEDAVATVPRFLKIPIQMLIGDRVLDGLNQCYNQQMTHFFGVYDGHGGSQVAKYCRERMHLALAEEIEFVKEGLVNGS INDDCQDQWKKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVALISSSHIIVSNCGDSRAVLCRGKEPLALSVDHKPN REDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVRFLPRAKEDECLILASDGLWDVMTNEEACDLA RKRILLWYKKNGFELSSERGEGVDPAAQAAAEFLSNRALQKGSKDNITVIVVDLKPQRKYKSKT
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF652
143 542 400 3.6E-170 –
PANTHER
PTHR13832
143 542 400 3.6E-170
IPR015655
SUPERFAMILY
SSF81606
214 536 323 1.83E-75
IPR036457
Gene3D
G3DSA:3.60.40.10
217 544 328 2.1E-110
IPR036457
SMART
SM00332
220 532 313 2.2E-95
IPR001932
ProSiteProfiles
PS51746
230 534 305 53.743
IPR001932
CDD
cd00143
235 534 300 6.83121E-91
IPR001932
Pfam
PF00481
265 527 263 1.0E-67
IPR001932
ProSitePatterns
PS01032
281 289 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0048000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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