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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0052500 |
| Transcript ID | LotjaGi5g1v0052500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Early nodulin-like protein; TAIR: AT2G25060.1 early nodulin-like protein 14; Swiss-Prot: sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1; TrEMBL-Plants: tr|A0A151TZ59|A0A151TZ59_CAJCA Early nodulin-like protein 1; Found in the gene: LotjaGi5g1v0052500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8783510..8787294) extracted from Lotus japonicus Gifu genome v1.2.
AGTCCCTCGGGAGAATTTAAAATGGAAAAAGGAATTAGGCAAGGCGATCCTCTTGCTCCTTTCTTGTTTCTAATTGTGGC TGAAGGTTTGAATGGGATGATGAGGCAAGCAGTTTCTGTTCAAAGATTTTCTCCGCTGAAATTTGGTGGTGAGTCTTCTC AGGTTCAAGGGTCCCTTTTGCAGTTTGCAGATGATGCTCTTTTTATTGGGGAGAGTAATTTACAGAATGTTTTGACTCTG AAAAGTATTCTGCGATGTTTTGAATTAGTCTCTGGCATGAAAGTTAATTTCCATAAAAGTAAGTTTGCAGGACTATCCAT ATCTGACTCTATGCTAAATCGGTTTGCTTCCCTGTTAAATTGTAAAGTTATGCATATCCCCTTCGTTTACTTGGGGCTCA CTGTGGGTGGTAATCCTAGAAGATTATCCTTTTGGGACCCTGTGGTTGCTAAGCTGAAGAGGAGGCTAGCTAGCTGGAAA GGAAAGCATCTATCCTTCGGGGGTAGACTTTGCCTAGTGAAGAGTGTATTGAGTGCCCTTCCCCTGTTTTATATTTCTTT TTTTCGAATGCCAAAGGGGGTTGTGCAGAAGTGTAATCAACTTATGATGCGTTTTTTGTGGGGTGGCTCAGATGAGGTGA GGAAGATTGCATGGGTTAGTTGGGAGCAGATCTGTAAACCAAAATGGGAGGCAGGTTTGGGTGTTAAAGACCTTGATAAA TTCAATGTGGCCTTGCTTGGTAAATGGAGGTGGCGGATGATGCATGAACGCGGGAATTTATGGTGTGATATTTTATGGAC AAAATATGGAAACAAGACCCCTTCGAAAGCTTCTTTGTGGTGGAAGGATCTGAATAAGTGCTGTGTGGGTGCTGTAGCTG GGAACTGGTTTGAGAGCTGCCTTTGCCGAAGAATTGGAGAAGGGGATGCTACTCTCTTTTGGCTTGAAGATTGGCATGGC AAAGGTAAATTTAAGGATAAATTTGCTGACCTTTTTACTATTTCATCTCAGCAGAATTTGAAATTGGTAGAGCTGGGTTG TTGGTCTAATGGTGAGTGGAGGTGGACTCTACAGTGGAAATGTCGTCTGAGTGAAGGTCTTGAGGCGCAGCTTGCAAGCA TGCTAGCTCTTATTTCTTCTTTTAAGCCAAGGAGAGGAGTTAATGACTCTTGGAATTGGATTAAAGAAGGAAATGGAAAA TACACTGTAAGTTCTGCATATGATTCTTTGGTATCTGGCAGTTTGGTTGAGGTGGACATAGTGTTCAAATTGTTATGGAA GGTGCTTGCCCCCTCTAATGCGCAAGCTCTCTGCTGGAAATTGATGCTTAACCGCATACAAACGAAGGATAATCTGTTGA GAAGGAGTGTTCCAATTGCTGATCCAAGCTGTGGTTTATGCTCCTTGGTAGCGGAAAGTTCCTCTCACCTTTTTCTTACA TGCTTATTCGCATGGGAGGTGTGGAATCAGACCCTCCAATGGCTAGGTAAGCATTTTGTTTTCCCTGCTAGCCCAAGGGA TCACTTTCTTCAATTTGCTTGGGCTAATTCTCCAAAACATCGAGTTGGTTTGTCCACTATATGGCTGGCTGTTGTGTGGG TGCTTTGGCATGGCAGGAATGCGAAAGTCTTTAATGAGGAGGATTTATCGTCTACTTCGCTCTTTGAACAAGCAAGGTTG AAGGCTTGGCTTTGGTTGAAGGCTAAGAACAAGAATTTTACCCACGCTATGTCTGAGTGAATTTTGGAACCATTGTGTTG CTTGGATGATATATAGCTTTGGGTGAGTTGGTTCGTGGATTGATACTGTACTTGCTAGTGGTGACCTTGGGCGAGCTTTA CTTGTTGCTGTTTGTTGGTCACTTTTCTATCTTCACGTGGTTGATAGTATACTGGAACATTTCTCTAGTTGTGGCACCTG ATGGTTCTTGTTGCTGGCATATTATGTTGGGTTTTTTGGGTCTATTGTATTAAGCTCCTTAGTGGGTACTCTTTGATTCT AGACTTCTGTACTCTTTGGGTTTTCCCTAGTAAGGTTTTAATGAGGCATATTTCTGGGATCTTCCCTCTAAGGGGTGGGG GTTGTTATTGTTAGCTAATGATAGCGTAAGTTTGTATGTTTTGTCACTTTCCTCTTTTTTCTCTTGTTTTTCTTTTTGTA TTGGGATTGAAGTACCCCTTGTACTTCGTTTCAATATATATTCAATGGCTTATAAAAAAAAAAAAACCTGCTGCAACCTT CCAATTAATTTCCATTTTTCCATAATTTTTGTACCGTTGCTACTATATATGCCAAACAAGCACAAACAACAAAACAAAAC ACTCAGTGGCCCCCACACCATGGTTATCTGCCATTCCCCATGTCACCTAACGGCTAGTTTCCCATCACCACCACCATAAA TACCACACACACTCCAAACCCCACTTTGCAAAACCAGCTTCTCATTTCCCTCACTTTGTCTGCATCTCTGAGATACAAAC AAAGCCAAAAACAAGTGCATATCAAGTGTGATAACCATGGCAGGTTCTTCTACAACTAGAGCCTCAGCTTGTTCTCTTTT GCTTTTATTCCTTCTCTTTGGCTTCTCTGCTGCTATGGATATCTTGGTTGGAGGCAAGATAGATGCATGGAAGGTCCCAT CTTCTGAATCAGACTCACTCAACAAATGGGCACAAAGGGCCAGGTTCCAAATTGGGGACCATCTCGGTAATTAGATTTCC AAAAAAATTCAATTTGCATTTGTTAATCAAGGTCCAATTTTTTGTCAATTTTTTCACCTGGGTCATCCTTGAAATTTCAT TTTCAAAATTTCCAATCTCATTTTGTTTATAAAGATTCAATTTTTATTAACATTTTCACGTTGCTCAGCTAATTTTCATT TCCAAAATTTCGTTTTTTTTTTCTTTTTTGTTGATCAAAATTCAGTCTTGAATTGATATTTTAACATGGGTCATTTTGTA CTGTGTTTTCAAGATTTTCATTTTTTTGTTCAATAAAGATCAAGTTTTTAATTGATATCTTCTCGTGGATCATGTCATCT TGGTAATTTCATTTCCAAGGTTTTCATTTTTTCCATCAAAATTTAATTTTTAATTGATGCTTCCAAGTGGGTCATCTTGG AACTCATTTGCAGTTTTTTCTTTTCTAATCAAGATTCAATCTATACTTATATTGATTGGAAACCAATGATCACCTGACAA ATTTTTCTCTTTTTAATTCTCAGTCTGGAAATATGATGGTGGGAAAGATTCAGTTTTGGAAGTGAGCAAGGAAGATTATG AAAAGTGCAACATCTCAAGCCCCATCAAGGAATACAATGATGGGAACACAAAGGTGAAGCTTGATCATCCTGGTCCATTC TACTTCATCAGTGGAGCAAAGGGTCACTGTGAAAAAGGTCAGAAGCTGGTTGTGGTGGTTTTGAGTCCAAGGGGAGGAAG AAACACTGGTACCAATGTTTCACCTGCACCTGCAAGTGCACCTGTTCCAACAGGGTTTGAAGGTCCAGCTGTAGCTCCAA GTCCAGTCAGCAGTGCCACTGCTTTGCAGGGTGGTCTTGTGATGTTGATGGGAGTACTTGCCATGTGGGTTTTCTGATGT GATGTGAATTTTCAATTTCATTGGATATTCATAAATCATAGATATTATTATTGTTAAGAGACTGTCACATTGAGGTGATT TTAAGTCTTATTATTATGCTACAATCATATAGATAAGAATTATATAATCTCTTGGAGTACTTGGTCAATTTTGTCTTTAA CTTTTTATTTTTATTATTTTGCACA
CDS sequence (LotjaGi5g1v0052500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGTTCTTCTACAACTAGAGCCTCAGCTTGTTCTCTTTTGCTTTTATTCCTTCTCTTTGGCTTCTCTGCTGCTAT GGATATCTTGGTTGGAGGCAAGATAGATGCATGGAAGGTCCCATCTTCTGAATCAGACTCACTCAACAAATGGGCACAAA GGGCCAGGTTCCAAATTGGGGACCATCTCGTCTGGAAATATGATGGTGGGAAAGATTCAGTTTTGGAAGTGAGCAAGGAA GATTATGAAAAGTGCAACATCTCAAGCCCCATCAAGGAATACAATGATGGGAACACAAAGGTGAAGCTTGATCATCCTGG TCCATTCTACTTCATCAGTGGAGCAAAGGGTCACTGTGAAAAAGGTCAGAAGCTGGTTGTGGTGGTTTTGAGTCCAAGGG GAGGAAGAAACACTGGTACCAATGTTTCACCTGCACCTGCAAGTGCACCTGTTCCAACAGGGTTTGAAGGTCCAGCTGTA GCTCCAAGTCCAGTCAGCAGTGCCACTGCTTTGCAGGGTGGTCTTGTGATGTTGATGGGAGTACTTGCCATGTGGGTTTT CTGA
Protein sequence (LotjaGi5g1v0052500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGSSTTRASACSLLLLFLLFGFSAAMDILVGGKIDAWKVPSSESDSLNKWAQRARFQIGDHLVWKYDGGKDSVLEVSKE DYEKCNISSPIKEYNDGNTKVKLDHPGPFYFISGAKGHCEKGQKLVVVVLSPRGGRNTGTNVSPAPASAPVPTGFEGPAV APSPVSSATALQGGLVMLMGVLAMWVF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| PANTHER | 12 | 169 | 158 | 1.1E-64 | – | |
| PANTHER | 12 | 169 | 158 | 1.1E-64 | ||
| TMHMM | 13 | 32 | 20 | - | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| SUPERFAMILY | 26 | 130 | 105 | 3.48E-33 | ||
| Phobius | 27 | 187 | 161 | - | – | |
| ProSiteProfiles | 27 | 131 | 105 | 39.341 | ||
| Gene3D | 27 | 143 | 117 | 8.2E-37 | ||
| CDD | 28 | 130 | 103 | 8.67265E-62 | ||
| Pfam | 38 | 123 | 86 | 1.3E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
Expression pattern of LotjaGi5g1v0052500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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