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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0059100 |
| Transcript ID | LotjaGi5g1v0059100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EamA-like transporter family; TAIR: AT4G32140.1 EamA-like transporter family; Swiss-Prot: sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C; TrEMBL-Plants: tr|I3S903|I3S903_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0059100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9849460..9854871) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTTGGAGATATAGAGCTGGGTTGTTCCTCATAGCTACTGTTGTTATTATATGGGTTTCCTCTGCTGAAGTCACCCA GGTAAATTCTTTATTTTCTTCTCAGTTTGAGATTATTTCATTTGATGGATGTGCATATATGATATATGAGTATGTTTCTT CCAGTTTATGTGGTTGCTGTATTGGATGGGAATTATCTTTGTATGATTTCATTGACTTGATTTTGAAGCTTCCTAAATCC TAAATTGATAGACTATATTAGAAACTTCAACCATTTCAATGATAAAAACCAATAGGTGATGTGAAATTGTGGGCTAGAAT AATAATTGTATACATACAGCTAAGTTGCTAACCCAAAACCTTGCAGTACTTGGGGCTTTGACTTAATCAGAATAGCTGAC ACTTATTATAATATGTCTCTTTGTGGATCTACTTTTTTAGTCCTATGTTGGATTGTTGTGTGTTATGTATTTTCACTAGA GGACATCATCATGCAGTCTAAGCTTGAAAGATTTATATTCGTGTTTGGTGTGTGTTGTTTCGATTTTATAGAGTTTCAAT ATCTGAGCCTTTATGGGCACATGATCAAAGGATATTTTGTTGAAACTCTGGTGAAATTTGACATTTTGCTCAGGGGGTAT CTTTTTGTTGGAGACTAGCTTGCAGGTTGCCGGAGCCGTGCCTTTTATCTTTGAATGTTTCTCTGACTTAAAGATTTCCG TGCAGGATATCTTTGTAGATTATAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCA ATAGCATTCATTAAGGACTGGTTGTGTAACTTACTTAAACATCGCTCTTCTAAAAGTGGAAAAAATGCAGAGAGCGGGGA TGAGTTTTCTGTCAGGATTGGCTCTCCTTTCAAAGGAAATGAAGCGCAGAGAAGCTTTGAAGTGGAACTGGGGAATATAA TTCGAAAAGATAGCGATTTAGACTTATCAACTCTTTCAGAAGTAAAGCCATTGGTGGTCAGATATAATGACACTAATTTG CCAAAAGAAGAGAAAGCTCTTACTGCAAAGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGA GGTTAGTAACTCCAGATTAATGGTTTGATTTTGTAGTTAGGCAGGACCAAAGCATGCAGTGCAACTGAATTATGTGATTA CATCTATTAATTAACTTTTGTTATCATATTTGATTAATCCAGCATATTTGATTATCAATAAGTTGAAAAGTAGCTTTGAA TTGAAAAGATGTTAAATCATATCAAGATCATATGAGTTAAGCTCATGGATACATGTTTCCTACCAGAACAATGACTGTAA CAGTAACTAATTTTGTACACAGATGATTATTCCTAGCTGTGATGAGTAAGACTTTTCTTAAGGTTGTTCAAAATGTTTTG AATTCCGGGTGTAGTTGAATTTTATAAATAGGTATTCTGACTTTTACTTCTGGTGCAAAACTCGCACAAAGAGGCACAAC AAGCACCCTTTACACCCTCTTCAAACTAGTCATTCATTATGGTTGAGAATATGTTATGTTATAGCTTTTTGGCAACTTAT ATTTGAGGAGCAATATTTTTTTCTTTTGTTTTCTTTCAGTATCTATCCAATGCTGCTCTTGCACGAACAAGTGTTGCCAG TACAACAGTATTATCATCTACTTCAGGACTCTTTACTCTTTTCATTGGTGTGTTAATGGGCCAAGACTCTTTAAGTATGT CAAAAGTGGTAGCTGTCTTCGTCAGCATGGTCGGGGTGGCCATGACAACTATGGGAAAAACTTGGGCTGCAGATGACTCA AAATTTAGTTCTTCGTAAGCTTTTCCATCTCAAAATCTCCTCTGATGATCGCAACATCTGGTTTTTCAAGTTTTAACTGA TTAGATAGAGATCAATCAAATAAATGCATATAGTAGAAGATGGTTTCTTTTCATTCTATACTCTCTAAGGTTAACAAAAA TCTGAAACAAGCAATATCAATTTTATAAAACTTGGATTCCACAATCCTTATTGCTTATGTTTGTCGTACTCGTATGCCTA GGAGATGGAAACAAAATGGTCATCTGATAGTGTCTTATTTATTTGGTTCCAAATTCCATAAAATTGCCATCTTTATGTTC TGTTGATCCCTTCTAAACTATGTTGGTATCACTTATGGGCTATGGCTATTTTCATATTGAGAGAGAGAGAGAGAGAGTAA GAGAGAAGAAGAATTTGAACATATAGGTGTTGAATATTGATCAAGTTTTCATAGTTTTGTGTTGGGTGTTAGTGAAGGAG GTTTTAAAACCAAGGATAAAGCTCATATAAAGTGAGAGTCACTTTAGAGGGTAAATTACATGATTGAGAAATCAATAGGT GAGACACAATAGTTATACTTGAGCAAGTACATGATTACAATCTCAACCATTGATTTATCAACCAATGGTTATGATGACTT ACTTTACCTTCTAAAGCTCACTTTAGAGGGGCCAAATCCTAAAGCCAGGCTGTTAAGAGGGAAGAGCACCTCTATAAATT GGGTTACATGTTTTCCACCTTGCTTATACATTCTTGTGTCAGCCCTATCAAGTAGGAAGCATGGTTCATTGACACTCTTG GGGATTTGGTAAATTGAGGTCTAGCCTCAATTTGATGCACAGAAAAAGGAGAACAAGAGGATTGCTGTTTTCAGGGTAGG AACATTTCAAATCTAAGAATATATCATATGAATGCTGCATACAAACTCCTAAGGGAAATTTATTACCCAATGACTTAAGC ATTTGAGATATTTGGTTCATGTTATGATTAAGTGGTTTAGAGTTCAACCCTTGTTGCCCCAATTCTAATTATAAGTGTGA AGAGTAGAGAGATAGAAGAAAGATGCCATCTAAATTTTTTGTATGTTCTACTAAATAGAAAGCTATTACAACGATCTATT TATAACTAGGATCTATTAGAGAGAGAGTGAGGAATCAGTTACTAACTGAATTAGTTAGTAACTGCTCCTATAACAGAATA CCTGCTAACTGTCAATAGCTGGATATAACAACCTATCATAATTGTCAACAGTTATAGAAACTCAATTAGTACAAACCCAA CATAAGATCCTAGATATTACACTGTACTCTAAAAAGTTGAGTTTCGCACAAGGTATGTGGGTCTGTGCATCGTCCACACT TCAAGCCTGATGGGCTCTTGCTTGAGGGAGCATGTTATAATATATATTCACTGTCTTCACTCTTCACCCAATAATTTAAT CTTTTGGGATAGTTTCTTCATGACAATTAAATATTGCTAAGTCCATCCCAAATAATAGTATAAAACATAAGAAAGAGCGT CATATTATACACTCTCACACAAGAGTTCCCACTTCCCTGGGATTTATCCTTGGTTGAAATTCAACTTAATTACTTTATGG ATATAGATGCTTTATTATCATGTCGAGGACTAAAGTCTTCTAAAAGCTCAACATGTTAACCTATTGCAGTGGAATGAGTG GTGTCTCTCAGAGTGAGAATGTGTGTTTGATCCCTAGTAAAACCTTTTTGGTCCCTTGAGAAATCTAATCTTCTGGTATG TGTATGTCAATGTAAGTGTCATCCATTATATTGCTAGAGACAGAGGGGACCATTGGAAACTGCAAAACTGAGCTGATTAC TTTAGTCATGATGCAGAAAATTAAGTTGTTGTCTTTTATGTATGATCACCAGCTTGCTCTTTGTAATCCTATTTTTTGGG CGTTGACAGTTGATATTTGTGTTCAGCAATGGACAGCGCTCTCTTGTTGGAGATCTTTTTGGCCTTCTCTCAGCCGTGTC ATATGGTCTATTTACAGGTTAACAAGGTCTTATATGCTTCTCTTTGTTACTTCAGATAATTTCAATAAATAATGACTTCT TTAACGTTAATGCCGCAGTTCTCTTAAAAAAGTTTTCTGGTGAAGAAGGAGAACGGGTTGATGTGCAAAAGCTGTTTGGA TATGTTGGACTGTTTACTCTAGTAGCTCTATGGTGGCTTAGTAAGTTTTACTGAGCAATGCTTCTGTAGTTACTTATCAC AGACAACTAATAAGGTTCTGTGAGCACAATCGTTTTAATGTGCTCATTTAGCTCGGTTGTTGTGTTCGCACTTACTTTCC ACAAACTTTTTTGATGTGCAAAAGCTGTTTGGATATGTTGGACAGTTTACTCTAGTAGCTCTATGGTGGCTTAGTAAGTT TTACTGAGCAATGCTTCTGTAGTTACTTATCACAGACAACTAATAAGGTTCTGTGAGCACAATCGTTTTAATGTGCTCAT TTAGCTCGGTTGTTGTGTTCGCACTTACTTTCCACAAACTTTTTTGATGTGCAAAAGCTGTTTGGATATGTTGGACAGTT TACTCTAGTAGCTCTATGGTGGCTTAGTAAGTTTTACTGAGCAATGCTTCTGTAGTTACTTATCACAGACAACTAATAAG GTTCTGTGAGCACAATCGTTTTAATGTGCTCATTTAGCTCGGTTGTTGTGTTCGCACTTACTTTCCACAAACTTTTTTGG TCCCGTTTGGAAGAGCTAATTTGAGCTTATCTTACAGTATAAGCGCTTATGTAGGTGTTTGTAAAAACTCATGTTAATAG CTTATGACCTATCTATAAGCTATTTTGAGCTTATTTCAATTAGTTTCTCAAATTGGCTTATGAATAAACACTTGTGCATT AAACGCACTTAATTAAGCTGCTTACTAAAATGCACTATTAATCCTTAACTAGTACATTAGAGGTCATTATGTCCCTCTCT TTTTATATGCATATTGCTGCACTAAACTGATTGCTAATTCTCTTGTATGCTGCTCATCTCAGTCTGGCCATTATCTGCCT TAGGAATTGAACCTAAGTTTACAATTCCTCATTCTGCTAGAGTGGATGAAGTGGTTCTTGCCAATGGATTCATTGGAAGC GTTCTCTCAGACTATTTCTGGTACATGAAATAAATCCGATTAATTTGTATACTCACTGAGTTATGCAAACTCATACATTA GAGTTTATTTGGTCTACCCAGGGCACTCTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTGGGCATGTCACTCACCA TTCCTCTTGCTATGTTGGCTGACATGGTGATCCACGGTCGGCATTATTCAGCATTATACATTCTTGGCTCAGTTCAGGTA TTGCTATCTGCAAAAATATCTGCAAATTTATGTTCTCTTAGCTCTCGTCTGGTACCAGGGGCCAGTGGCATGGTCCTTCT TTCATTTTTATTAAAAAGATCATATCCATCTCTTGGTGTTGTGGTGTTGTTTCCATTGCTGTTCAGATAATTTATATTTG TATTTATGCAAGTTTTCATGTACATATTTCTATTCATTTTCTCTTCCTTTGA
CDS sequence (LotjaGi5g1v0059100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGGAGATATAGAGCTGGGTTGTTCCTCATAGCTACTGTTGTTATTATATGGGTTTCCTCTGCTGAAGTCACCCA GGATATCTTTGTAGATTATAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAG CATTCATTAAGGACTGGTTGTGTAACTTACTTAAACATCGCTCTTCTAAAAGTGGAAAAAATGCAGAGAGCGGGGATGAG TTTTCTGTCAGGATTGGCTCTCCTTTCAAAGGAAATGAAGCGCAGAGAAGCTTTGAAGTGGAACTGGGGAATATAATTCG AAAAGATAGCGATTTAGACTTATCAACTCTTTCAGAAGTAAAGCCATTGGTGGTCAGATATAATGACACTAATTTGCCAA AAGAAGAGAAAGCTCTTACTGCAAAGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTAT CTATCCAATGCTGCTCTTGCACGAACAAGTGTTGCCAGTACAACAGTATTATCATCTACTTCAGGACTCTTTACTCTTTT CATTGGTGTGTTAATGGGCCAAGACTCTTTAAGTATGTCAAAAGTGGTAGCTGTCTTCGTCAGCATGGTCGGGGTGGCCA TGACAACTATGGGAAAAACTTGGGCTGCAGATGACTCAAAATTTAGTTCTTCCAATGGACAGCGCTCTCTTGTTGGAGAT CTTTTTGGCCTTCTCTCAGCCGTGTCATATGGTCTATTTACAGTTCTCTTAAAAAAGTTTTCTGGTGAAGAAGGAGAACG GGTTGATGTGCAAAAGCTGTTTGGATATGTTGGACTGTTTACTCTAGTAGCTCTATGGTGGCTTATCTGGCCATTATCTG CCTTAGGAATTGAACCTAAGTTTACAATTCCTCATTCTGCTAGAGTGGATGAAGTGGTTCTTGCCAATGGATTCATTGGA AGCGTTCTCTCAGACTATTTCTGGGCACTCTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTGGGCATGTCACTCAC CATTCCTCTTGCTATGTTGGCTGACATGGTGATCCACGGTCGGCATTATTCAGCATTATACATTCTTGGCTCAGTTCAGA TAATTTATATTTGTATTTATGCAAGTTTTCATGTACATATTTCTATTCATTTTCTCTTCCTTTGA
Protein sequence (LotjaGi5g1v0059100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGWRYRAGLFLIATVVIIWVSSAEVTQDIFVDYKQPFAVTYLGASLMVVYLPIAFIKDWLCNLLKHRSSKSGKNAESGDE FSVRIGSPFKGNEAQRSFEVELGNIIRKDSDLDLSTLSEVKPLVVRYNDTNLPKEEKALTAKEIATYGFYIAPIWFITEY LSNAALARTSVASTTVLSSTSGLFTLFIGVLMGQDSLSMSKVVAVFVSMVGVAMTTMGKTWAADDSKFSSSNGQRSLVGD LFGLLSAVSYGLFTVLLKKFSGEEGERVDVQKLFGYVGLFTLVALWWLIWPLSALGIEPKFTIPHSARVDEVVLANGFIG SVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMVIHGRHYSALYILGSVQIIYICIYASFHVHISIHFLFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| PANTHER | 1 | 385 | 385 | 1.6E-171 | – | |
| PANTHER | 1 | 385 | 385 | 1.6E-171 | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| TMHMM | 5 | 22 | 18 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 38 | 15 | - | – | |
| TMHMM | 37 | 56 | 20 | - | – | |
| Phobius | 39 | 60 | 22 | - | – | |
| Phobius | 61 | 143 | 83 | - | – | |
| Pfam | 138 | 216 | 79 | 2.5E-7 | ||
| SUPERFAMILY | 142 | 219 | 78 | 7.85E-7 | – | |
| Phobius | 144 | 165 | 22 | - | – | |
| TMHMM | 144 | 166 | 23 | - | – | |
| Phobius | 166 | 170 | 5 | - | – | |
| TMHMM | 171 | 193 | 23 | - | – | |
| Phobius | 171 | 190 | 20 | - | – | |
| Phobius | 191 | 201 | 11 | - | – | |
| Phobius | 202 | 221 | 20 | - | – | |
| TMHMM | 202 | 223 | 22 | - | – | |
| Phobius | 222 | 240 | 19 | - | – | |
| TMHMM | 238 | 260 | 23 | - | – | |
| Phobius | 241 | 261 | 21 | - | – | |
| Phobius | 262 | 272 | 11 | - | – | |
| TMHMM | 273 | 295 | 23 | - | – | |
| Phobius | 273 | 290 | 18 | - | – | |
| Phobius | 291 | 325 | 35 | - | – | |
| Phobius | 326 | 353 | 28 | - | – | |
| TMHMM | 332 | 354 | 23 | - | – | |
| Phobius | 354 | 364 | 11 | - | – | |
| Phobius | 365 | 393 | 29 | - | – | |
| TMHMM | 366 | 388 | 23 | - | – | |
| Phobius | 394 | 394 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0059100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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