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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0060400 |
| Transcript ID | LotjaGi5g1v0060400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SPX domain-containing family protein; TAIR: AT2G26660.1 SPX domain-containing protein 2 (SPX2); Swiss-Prot: sp|O48781|SPX2_ARATH SPX domain-containing protein 2; TrEMBL-Plants: tr|I3SQV7|I3SQV7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0060400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10132196..10136514) extracted from Lotus japonicus Gifu genome v1.2.
CCAACAACAAGTACACACTTGACACATAATATTCCCTCTCTCACAAAGATTCTATTTACTATATTTCATTTCAATTTCAA TATATAACCGGAACCCAAAACTCTTTAATTAGGTTTTTTAAATCCGCATTTCAAGTTCAGTTTCTAACCCCAAAAAAAAA ACAAACATTCCTACGTTCTCTTCTTCTCCCTTTCCCTTTCGTTCAATTTTTTCAGAACCAAAACAACGATGAAGTTCTGG AAGATTCTGAGCAACCAGATCGAGCAAACGCTACCTGATTGGCGTGACAAGTTTCTCTCCTACAAGGATCTCAAGAAACA GCTCAAGCTCATAGCCCCCAAAGAACCCTCCTCCTCCTCCTCCTCCCTCAAACGACGCCGTTCCGACAACGACGACGGCG CCGGCGAGGTCTCCAAAGAGGTCAACGATTTCCTCCGTCTTTTGGAGGTCGAGATTGAAAAGTTCAACGCCTTTTTCGTC GAGATGGAAGAGGAATATGTAATCAAATGGAAGGTAACTAACTAACTAATCACTAATCACCATTATCGATTCTAGTTTTT TGCTTTTTTTTCTTCTAGATAATCAGATTAGTTCAACGTGATATTTTTTTCTTGCTCAACGTGATTTTGCGAGCATGTGC TTCTAAGAATTTCACCCAAACATGTTCATATGATGAGAAACCACGTTAGAGAGTTAGAGAATATTAGAACTGGTTCTGTA GATGGGCAATGTAAATGGAAAACCATGTAAGGGTTTGATAATTTGCTGTGTATGGAAAAGGCTATTCAAAGGGATTTGTT TTGTTAGTGTGGACTGGGACTAAAAAATATCAATTCGGTAATAATGAATTAATGAAAATTGTGTTAGAAGACATGGTTCA TTATTTTGGTGGTTTAAGTTTCCGTTGTTCGGCATATGATAACTTTCTTGGAGGGCATGAGTTACGCTTTTGAATTTTAG CATTCGTGTTGCTGTTTAGCATGTAAATCTAAAGGCATACATTTAACTGATGATGCCTTAAGTTTCATTTAATTTGGAAC TTAATAATTTCGCTTTGTCTTTAGTTCTTTGTACAAGATGCGTGTTATCAGGTGGGCAGAAGAGAAATTTTGTGATGGAT GGAAAATGTTATAAACTTTAGTTGGCATATGTTTATAATTAGTAATGCTAGTGCTACACACATATATGTCACCCTTACAT GTCGACAATTTTCACCATATGATTTCTGGATGCTTATATTCTGACACTGGCACATCTCCAAACATGAGAAGATGTGACTC CTGGAGATATGGACCAAGCATTTTCCATTTCTAAGATTATATGTTTATGTTTGTGATGCAGGAGTTGCAAAACAAAGTTG CTTGGGCCAAGAATTCAGATGTAGATTTGATGCCAGTAGGGAGGGAAATAGTGGATTTGCATGGAGAGATGGTTTTGTTG GAGAACTACAGTGCACTTAACTACACAGGTATTTTCCTTTCTTTATGAACCATTGCATAAGTTTTAAGTGACAGATTCCA TTTTTATCATCAAGAGTATTAACATTTGATGACTTGAAGGATCTCAGACATTGTTAAAATGGAGTAAAATAGTATTTTGG TATTTGGAATTGGAAGTATACCTCACTTGCAAATTTGCAATGCAGTCCCGCCCGCGTGTAAATTCGGCATATGATTTTGT CCTTGAATTATTCAACCCGATTCATGACAATCTCCTATGACATATAATAAAAGGGCCAATAAGAAATGAGTTTGAATAAT TTATGTACTAAATGGTCTTAAATCAAGGACTAAATTGCCAAACACTTTTAGAATGTGTTTGGATGGAGTGTTTTTAGGAA GTAATGTAATTTTTCAGGGAATTTGAAATGCTCTATTTTAAAATACAGTGTGTGGATGTTTATTACAAAGAATTTTAAAT TCAAGGTAATTAAACTGGGTTGAGAGTGAGGAAATCAAAATGACACCAAAATAGGTAGAATTTGTGAAATTCCTCTCATC TTTCTCGATCGATTCTTCCTTTATCTGGCTAAAGCAATACTACTGGTGGTTCGGTCGGTTGTAAAACTGCACTTTCCTGC CGTAAAGTCCCTCCAACAACCAGAAAAACAAGCTTTGTGGTTGCCATGGTGAATGCTCTGCTATGGTGTACATGATGGAG ACTTCCAGATCTGAAACTCCGCCTCCTCAAAATGACGACGAAGTTGGTCGTGGAGGACCTTTAATAGCTTCATAGCGGAG GAATAGCCATCTGCGGTGTTGGGGGTCTGTGGGCGGCGTTAACCTTAGTGTATTGGTGTTGAAGTGAGGGAAAGGTGAAC GTGCCGAGGAGCACCATGAGCGAAACAATGCTGCACACCTCATCTTGGGGGCTCCAGAGCACCATGAGACCTTGCGCCAC AACTTACATCGGAAGACCCACAAGCACCACACTGGCTAGAGAAACTAGAAATCTACAAGACAAAAAAGAAAATCACAATT GAAGGAATGCAAACATTTAACCCAAACAAGAGATGTTACAAATTTAGGGAGTTCAATTGATTCAATTGAAATCCCTTGTT TTTTAAATTCTCTGAAATTTGAAAATTCTCTATCCAAACACAGGGTTAGGTTCAAAATGGAAGTTTACTTATTAATATGT ATAGCCAGATGAAATTGTAAGGAATCATGGACTATATAGTCTTAACCCAGACAATTTTGTTGGCAACAATATTATTTGAT CACAAGCCCGACTAAAAGCTATGGACTCTATTTGCTCAATTCATTTGACATCTTGTATTTTTTCCCCTTTCTTTTTTGGT TTACCAGTTACCACTTCTATTGCTTTTTAATTCTTTTATATACTCCATTTATCTTGTAACATGTTACTGGTAAATCCACG CATATAAGTCTCGAACTTTTATTTGAAAAATGAGTAACTATTGTGCGCTGTTCTGGAAGAATTCCATTTATTAACTAGGT CTACTAATACAATTCTAATTGAATGTATCATTTAGTTATGCCTGTCAATAAATTGGTTCATAAAAGAAGTGAATGATTAA ACCCACACTAATATCTGGTATGAAGAATAAGTCACCATATATATTGTAGACAAATTTGACTTTTGAGGTCCTGTTAACTG TTTTGTCAGCTGACATAATACTTTATCGAATGTTTAATAAAGTAGATTGATGGTTAAATATTCCTTGGATTAGGAGGGAG TTTTGATGATGAATGTTTAGAAATGTTGCTTATTCTTCTATCTCATCTTCCATTCTTTGTGCAGGTCTAGTGAAGATAAT AAAGAAATATGATAAGCGAACTGGTGCGCTACTTCGATTACCTTTTATCCAAGATGTATTGAACCAGCCCTTCTTCAAAA TTGATGTTCTTAACAAGCTTGTAAAGGAGTGTGAGGTGATGCTAAGTATTCTTTTCCCCAAAAGTGGGTCTCTAGGTCCA TCCTTCTCAACTAGTGATCTTGAGGAAGAAGCGTGCAGTTCCATGACTGCAAATGAAAATAGAGAGACACTGAAGCAGGT GCCAAAAGAACTTGCCGAAATCCAAAATATGGAGAACATGTTCATCAAACTAACTACATCAGCATTGGATACCTTGAAAG AGATTAGGGGTGGAAGCTCGACCGTAAGCATATACTCATTGCCTCCGCATAAGGAGGCTATGGTAGAGCAAGCAGCCAAA TAGATGTTTGGAGTAACACAGGATATGTGCTGACTTTGTATCATATCACTCTTTTTTCTCTGCTTTAGATCAAACAGCCA AATATAGATGATGGCAATAACTTGTGATAGCTGCTGAACATTGTCCTTTTCTATGTTGAGAAGAGAACCCCATTCAAAAT GAGGCTGGAGGGGAATCTGTCCTCCTTTTTGGAACAGTGTCCGATGGTAGATGGATGCGGCTAGATTGATTTTCTCCTTT TTTTTTTTCTTTTTTATGCACAAAATTCTCTTCAGGGTTATAGGGGCATGGAATCTGGAAAAACAGCATGTGCAGCTTCA GCTTGTATCACCTTATTAACTATGGTCATTATTTTTGTCACCACCCCTATAGATATTCATATCATACTCTTCCCTTCCGC AGTTTCAATTTGTGAAAGAGCAATGCTATATAGTACGAGAGGGCACGTACGAAGAATGCACGAGAGTTCAAAACTACAAC TGCCAAAAAAAAAAGTAAACCTACTATTTCTGGCGGTTCAAAACCGCCACAAAATTACAACTGTCAAAATAAAAAGAAAA GCTACGGTAACCGCCAGAAAATGCTTCGTGCGTGGTGCACGAGCCCCAAGGTCGTGCCCCACAGCATTTTCCTTTGAGA
CDS sequence (LotjaGi5g1v0060400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTCTGGAAGATTCTGAGCAACCAGATCGAGCAAACGCTACCTGATTGGCGTGACAAGTTTCTCTCCTACAAGGA TCTCAAGAAACAGCTCAAGCTCATAGCCCCCAAAGAACCCTCCTCCTCCTCCTCCTCCCTCAAACGACGCCGTTCCGACA ACGACGACGGCGCCGGCGAGGTCTCCAAAGAGGTCAACGATTTCCTCCGTCTTTTGGAGGTCGAGATTGAAAAGTTCAAC GCCTTTTTCGTCGAGATGGAAGAGGAATATGTAATCAAATGGAAGGAGTTGCAAAACAAAGTTGCTTGGGCCAAGAATTC AGATGTAGATTTGATGCCAGTAGGGAGGGAAATAGTGGATTTGCATGGAGAGATGGTTTTGTTGGAGAACTACAGTGCAC TTAACTACACAGGTCTAGTGAAGATAATAAAGAAATATGATAAGCGAACTGGTGCGCTACTTCGATTACCTTTTATCCAA GATGTATTGAACCAGCCCTTCTTCAAAATTGATGTTCTTAACAAGCTTGTAAAGGAGTGTGAGGTGATGCTAAGTATTCT TTTCCCCAAAAGTGGGTCTCTAGGTCCATCCTTCTCAACTAGTGATCTTGAGGAAGAAGCGTGCAGTTCCATGACTGCAA ATGAAAATAGAGAGACACTGAAGCAGGTGCCAAAAGAACTTGCCGAAATCCAAAATATGGAGAACATGTTCATCAAACTA ACTACATCAGCATTGGATACCTTGAAAGAGATTAGGGGTGGAAGCTCGACCGTAAGCATATACTCATTGCCTCCGCATAA GGAGGCTATGGTAGAGCAAGCAGCCAAATAG
Protein sequence (LotjaGi5g1v0060400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFWKILSNQIEQTLPDWRDKFLSYKDLKKQLKLIAPKEPSSSSSSLKRRRSDNDDGAGEVSKEVNDFLRLLEVEIEKFN AFFVEMEEEYVIKWKELQNKVAWAKNSDVDLMPVGREIVDLHGEMVLLENYSALNYTGLVKIIKKYDKRTGALLRLPFIQ DVLNQPFFKIDVLNKLVKECEVMLSILFPKSGSLGPSFSTSDLEEEACSSMTANENRETLKQVPKELAEIQNMENMFIKL TTSALDTLKEIRGGSSTVSIYSLPPHKEAMVEQAAK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 269 | 269 | 9.8E-124 | – | |
| ProSiteProfiles | 1 | 160 | 160 | 24.505 | ||
| PANTHER | 1 | 269 | 269 | 9.8E-124 | ||
| CDD | 2 | 149 | 148 | 4.01273E-81 | – | |
| MobiDBLite | 36 | 60 | 25 | - | – | |
| MobiDBLite | 44 | 60 | 17 | - | – | |
| Pfam | 118 | 161 | 44 | 1.3E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellular response to phosphate starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate. |
Expression pattern of LotjaGi5g1v0060400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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