Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0063400 |
| Transcript ID | LotjaGi5g1v0063400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ARF-GAP domain 1; TAIR: AT4G32630.1 ArfGap/RecO-like zinc finger domain-containing protein; Swiss-Prot: sp|Q8RXE7|AGD14_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD14; TrEMBL-Plants: tr|K7M6G7|K7M6G7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0063400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10659632..10666610) extracted from Lotus japonicus Gifu genome v1.2.
CGGCAACTTTCTCTCATTGGGTGAAATGACCAAAATTTGCCTGAGAAATCTTTGCCCCTAATTTCTGAAACATCTGGAAT TCGATTCTGGCTTTGCTGAAACAACCAACTATCATATGTTGTTTCCCTTTGTCTATCATCATCATCATCATTAGGCTTGT ATTCTGATTCATCAAATTGGTGCAGGTTCATTTTCTAATAGCTTTCTTGTTTTGTTGTGTTGGTATGTAGAATAAAGGAC ATATGACTTACATGTTAAATGCAAAAAAGTTGTGCAATTTAGTGTAAGATTAGTGGTAATATAATGACAGAAAGGGGGAA AAGTGAATGAAATAGACAAGAAAATCAAATTATTCTTGTATTATTACGCATTTGATGTAAAACATATCATATTATTTAGC TTTTCAAACATAAAAAAGATAAGCATGGTGTAAAGCTTTCAGATAATGTTAATATTCCGAATTTCTGACTACATGGATCA TAAGTGATGTTTAATGTTTTGTTAGCATTAAAGAATCAAAAGGGGTTATTGAATGTTTTGTGAAAAAAAAAATCAAATTT GTGAAATCAGTAGAAAATTTATAAAGTTCTTCTCTCATTACATTTTCATTCCGCCAGAAGATGGGACATCATAAGAAAGA AGATGAAAAGACTGAAAAAGTAATTCGAGGACTTCTAAAACTTCCCGAAAATCGAAGATGCATCAACTGTAACATCCTGG TATAAAGTTACTTTTTAGCAATTTCTTTAGCCTAATTTTTTTTTGTCAAGAATTCACAACATTCCAAAAGGCTTGTTTGG CATTTCAGTATTTCTTCTATATTTCGCAGGCTTATCACTGCTTATTTCTTCCAATCTTGCTTATTGACTATTTATTTGAA TTAGGGACCGCAATATGTCTGTACCACATTCTCGACATTTGTTTGCACAAATTGCAGTGGGATACAGTAAGCATGGAATT CATTCATTTTTTGAGTAATGTTTTTTTGTTTAGAAGAGAACCCCAACGAAATGCAAGAAACAACAAATTGCTTTGTTTTT CATTTATCATGTTTTAAATTTTAGTGGGTTTACAGTTCATACAATATAACATTGTTGTTTTTTTATTACAAATTGAAGCC CGTAATGGACTGATATACATATATATATTAATATTTATTTTATCTCATTTTTTACTCCATTTAATTGTGCAAGCTTTCTG ATCCTTGTGTGAATTAGTAATTTGTTGTTGCTTACTAAGTTATATGAATTACAGTCGAGAGTTTACCCATAGAGTCAAAT CTATTTCAATGGCTAAATTTACTCCGGAAGAAGTTACAGCTCTTCAAGCAGGTGGTAATGAGGTGTGCATTATAATTCTT CAATTATATAGGCTTAAGTACATTTTCGGTCCCTATAATTTCAAAAATGCGTGATTTTGGTTCATGCAACTTCAATCACT CGAATTACGTCTCTACTTTTAAAATTAAATAAATTTGGACTAGACGTTAACTTTTCATCTAATAGCTATTAGAAAATAAA ATTAATATATATATATATATATATATATATATATATATAGGATGTATCATGTGAGAAAGGTGTTCTTATGTGAGAACATG AGAATAAATCATGACCGTTAGATCTAATCATGAACGGTCCAGATTAAAACATTAAGTCATGTGAGTTTTTAAGAAAGTCA CATGACTTTTTTAAGTGATCATGTGAGCATTAAATTGTTTTAATTTGGACTGTTCATAACATGATCTAACGGTCATGATT TATTCTCATGTTCTCACATGAGAACACCTTTATCACATGATACATCATCTATATATATATATCACAATTTTTGACATGAT AAGACCATAAAAGTAATTCATGTAATGTTAATTATTGGATGTTAATTTAAAAACAGAAGGACTTAATTAGAACATAATAA CCACTTGTTATTTAGTAAGAAATGTCTAACATTAGTCCATGAACAGAGAGCAAAGCATATTTACTTAAAAGAGTGGGATT CTTTACGCCATTCTTACCCTGATTCGTGGTAATTTTGCATATCTTGTTTATTCTATTCATAGAAATAGACTATACTGCAT ATAGTTTTCTAATTCAATTTTTTTCTTCCAGTAATATACACAAACTTCGAGATTTTATCAAGCATGTCTATGTGGACAGA AAATTTACCGGTGAAAGGAATTATTGCACTCTTCCTAGAGTTAGATTGGTAACTACTATTCACACAACTTTTTTTATCGC ATATGAGTTAATAATAAAAGATGACTAATTAAAAGAATTTTGAAACCTCTGCAATTGAGTTTCGTTAGAGCTCACTTTTG CACAATCACAAGCCCTTGATTTTTGCAATCAATGACTATGATTAATCAACATACAAAATAACTTCTTAAATTAAAAAGTT AATGATGATTTATTAGCCCTATAGGCTGCAAAGAATCTAAATTAAATTTAAAGTTCTTTTTGTTGGTTTGATTTTGTAAA CAGAATGACAAGGAGGATTCATATGAAAGTAGAAAGAAAAGTTTATTTCGTTTAGATTTCAAAAGTTCGCATTCAAGTCC TGGTGCAAGAAGTGATGACTTGAGTTTCAGATATTTATATGATGAAAGCAAGAGTCCTAAATATGCACAAAAGTATTCAA GGCGTGGAGGTTTAAGCAAAAGTCCTATAAAATTTGAGGTTGTTGATGATAGGCTCAAAGATGATGAATTCAGAAATCGT AGGCTATCAAATCTACAATCAAAGCTAAGAGCCCTTTCACTTGATAGTCAGAAGAATGTTGAAAGATCCCAACCACGCCC TGTGAGTAATATAATGGGAGAAAATTCTCCTTCTCCACAAGTAGGTGAATGAATTGTTTTCTTAAATACAACCATGTTAG CTTTTTCTAGATTTATGTTTTTGCATCGAGTCATAACTTTTTGAGGGTTAATTTGGTTAATATTTCATTCTCATACTTAA ATATGTTGCATTATTTAAAGATGTGTTTATGGTTTATGTATTTAAGTAGGTTTTTTTTAAGGAGAATAATATATATTAGA AATTTGATAGCATCATGAGAATAACCCTCTCATGGGAAGGTAAAACCCTCCTCACGCAATTTGAAAGTAGGCTTGTTAAA AGTGGACGGTGATTTATTAGCTCACCTAACTTTGTGAGCTAAAGGGGCTAACCAAAGTCTAACTAGCTTGTCAGCCAACT CACTTTATTTCAATTAAAAGTTTTATTTTCTATTAAAAAAAGAACTGAAATGTTTTTCTACTAATAAAACATCATTTCTT ATATATTTTGTTATGATAAAATTGAAATTTTGATTTTTTCCACATATATTTTCTAGTTACTAGTACTTTTTCATTTTTTA TGAATTTTATGAATTATTTTCTTTATATTAAAGTGAGCCAGCTCATCTAACCAACCAGTTCGTGGTGGATTGAGTCGAGC TATGATTTTAAAGGCTCACTACAAAAGTGACCTAGCTCAACTTAGCTCAAGTTTTGTTCAACCAGCGATCATACTCACTT TCAGATAAGTAGCACATGCAGTTTCAAGAAATACAAAAGGGTTGGTGCAAGCATGAAGTCCCATAACAATGTGAACCCAT CCCCCAAATTTTGAGGTTAAATTAGTGCACATAATCTCTAAGTCTTCTATATTCAAAAATGTATTTACGTCTATCCGAAT AAATTAACATAGAAATTAGTTCTTCTATAATTTCCATCATGCTTACTTTGACATTGTGCATCTATTATAGTCATTTGGTT TTTTTTCAGGATGTGGAAACAAGCTTCTTTTTAAAATGATAGTAATGAGTTCTTAAAATTTTCTATGATGCCTGCCATTT AGGATATTATATTGTGGTTCTATTAATTTATCAATTATTATCTAAACTAAATCTTTGATGAACTTTAATCGAAATAGGTC ACACCTTCTGCTGGCACTGGTTCTGAAGAGAAAAATTCATCTGAGAAAGTAATTAATAATACAGAAAGCACTATTGATTT GTGTTCCAAGTCTCAAGCTTCTGAAGATGCTACTGGAGTTGAAACTGAAACACCACGTATGTCACAGGAAAGTGGGAATA ATTGGGCCTCATTTGAAGCTTCTAAAGAGGACAATGCTCCTAAAACTCCAAACACCAACACTACCCTGAAATCACCTACA ATAGAAGCAAGACCTGAACCAAAATTCACAAATCCTTTAGACCTATTACTTTTTGAATTAACACCAACCACTACCACGGA GATAGAACAATCATCTAATGCAACCCCAACACAAGCTGAGACACATGATGCACAAGACTCCATTGAAGAAGTTTCACATG CTCATACACCATCAAGTATGCAATATCTTCCTTCTGCATCAGTAGATTCTAGCCTTATGACACAACCTACAAGTGCACCA GCCGAAGTTGTTGTAGATAAACATAATCTGGTGAGATATGAAACATAGATTTGTTTACATAAATTGTTGAAATGTCAATA TCACTGTTGACTTCTTCAGCCAAATACTGCTTATACATTGAATTTGAATTTAAGTTAGGCTTGACTCTACTATAAAAACA AGAGAAGATTGTATTCCCATTTATAAGGACTTATTAGGTCATATCCTTAATCAATGTAAGACATCTTAACACCCAAGCAT AGTTACTCATCTTGTTGTCTGAATTGATTGCACACAGTCACCAATTGTTCCGACTAAAGATGACACTTTGTGTGATTCTA TTGAACAATCTTTTCAAACAACCCCAGAATGTACTCATGACACCAAAGTCAATATTGTTGGCTCCCAGCCCAGCATAGTG GAAACAAGATCTATTGAAAGAAGGGAACTTCCAGAGGTATTAAATGTAGCCAAAATTCTACTATGTTATTCAGATTTACT GTTAGGAAGAATGAAAATGAGAAAATAACACATGCAGATGCACTTATTGTTAAATTAGAAAATTGTTATAACAAAAAGTG TTTCAAGATGTATTATTTTTATTTTTTTTAACAATGAACCAAATAAACCATGTTTTCCTATTTTCATGATACTCGACCCT TGATGCATATATAAATTATGTGCAGGATCTTTTTACTGCAAGCTACTTATCTGGACCTGCACCACTTGCAGGTTGGCATA ATGTTCAACCTCAAGGCATGGGCATGAGATATGGCATGCAGTTTTATCCTAGTGCAATGGTATCTTTTTATGAACCTTGT TATTGTTATTTTGTTCATCCATATATAAGTTTCCCAAGATTTTGATATGATATGGTGCTTGATTTGCAGCCTCCTTCAAC ACTTCCATTTGCACCAAAGTCTACAAACCCGTTTGAAGCATCCGAGGGGAGAGGTCTAATCCATGCTGCATCAGTATGTT CAACATTATACATTTGCAGTGTTATTGTCTTTGAATTTACATATTTTTAAAATATACCAATAACTAGTTTTAACCTTCAA AACATGTTTTTTGTTTATGTATAGTTTCCTACTATGGCTTCTTTGAATGGTGCAATGCCAACTGCATCACCCGAAACTGG CCTAATGCATGTTTCTAGCCTTGGGTCTTTAAATACAATGGTGCCTTTGTCCACAAGTTATGCAACACCCATTCCTCCAC AGACTCCCTTTGCATCTGGAGCTCCTACTGGTACTGCCATTCTTATATCATCCTTGTCTTTTAAGGAGTTTCTCTTTTTG TTTTCTTTGCTCATGGTTATTTTTTCTTTAAACTTCTCAGCCTCAGGTGTGTATTTTGATCAAGATAATGGGGAGCAACC TAGAAGGTAATTTTTACTATTGATATTATTTTGGTTTAGGTTAAATATGTTTTTGGTCCCTATAAAATATCAAATTATTG AGTCCCTAGGAGGGACTAAAGCCAAACTAAAAATACAATTTCAAGGATAGAAATTACAAAAACAAAACTTGGTCATTCGA ATTACTTTTTCTTTTGGTATTGGTCATATTGGGGACTTAAACATGTGTATTTCTAGTATTATTGATATATAGCAAATAAT TTTTTTAAGGAACCAAAAAACTATCATTATTTAGGGACTAAATTTTGGTGTGTATCTACTATATTCATTGGATTCTAAGC TATGAAGCATGCATGTCACCAAGCTAGTTTCTCTTCATTTTAAATAAGAAGAATGTCATTTCTTATTAGTGGAAATGACA CATTAAGAAAAAGATGACAAATTATAGTTTCTCTTTAAAGTCTAATAAGTCTATATGAAAAAGAGTAACTTTAATTTAAG GAGGAAGATACAATTAAATGATGAGGACATGAAGATAGTGCCAAAGATAGTTGGCACAACTGGTTTGAAATATTTGACTC TCCATTCCTCATAAGCCTTTATAGTTTTAGATATCCCTCTAAGACCACTAATACTATTGTCTAAAAATTGTACTTATAAA AGAGTAGTGCTGCCCTAACTTCTGAGCTAGGTTTCAGAGTAGAGTGAAGCCTAACCTAAATTTAAAAAATGTCTAAGAAT CATACGCCATCCTTATGTATACTCATTCAAATACTAAGTATCTTCATATGTTTATTATGACTAGAGATTACAAAGATTAT GCTAACATAAAATTTCCGGTCGAAAATGTTAATACCATTATAATTGTTGTTGATTTTTAATATTTTGTAGGTCACAAAGA ATTGATAGCTTCAATCGTGACATAACTGGTTTTGGATCTCTAGATCCCATTCAACAATCATCTGGGGAATATGTGACATC AAGAACTCCAAATTCTTTTTCCAATACAAAGCGAAACCCATTTGAATAGTTTGCCTTATTGTCATGATCTAATGTAAAAA TTGTATAGTCACCATGATCCTAAGCCAAGCTAAGTTTGTTTCTAGTTTAATATAAATTTGAAAGAACATGACCCAGACAT AATCTATAGTTCATGTAGAAAACATTACACACAAGCGAATATCATAGGATTTATTACACTTGAGTTATTCGAATTCCTTG TAACTTGTTACAGTTCTTT
CDS sequence (LotjaGi5g1v0063400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGACATCATAAGAAAGAAGATGAAAAGACTGAAAAAGTAATTCGAGGACTTCTAAAACTTCCCGAAAATCGAAGATG CATCAACTGTAACATCCTGGGACCGCAATATGTCTGTACCACATTCTCGACATTTGTTTGCACAAATTGCAGTGGGATAC ATCGAGAGTTTACCCATAGAGTCAAATCTATTTCAATGGCTAAATTTACTCCGGAAGAAGTTACAGCTCTTCAAGCAGGT GGTAATGAGAGAGCAAAGCATATTTACTTAAAAGAGTGGGATTCTTTACGCCATTCTTACCCTGATTCGTGTAATATACA CAAACTTCGAGATTTTATCAAGCATGTCTATGTGGACAGAAAATTTACCGGTGAAAGGAATTATTGCACTCTTCCTAGAG TTAGATTGAATGACAAGGAGGATTCATATGAAAGTAGAAAGAAAAGTTTATTTCGTTTAGATTTCAAAAGTTCGCATTCA AGTCCTGGTGCAAGAAGTGATGACTTGAGTTTCAGATATTTATATGATGAAAGCAAGAGTCCTAAATATGCACAAAAGTA TTCAAGGCGTGGAGGTTTAAGCAAAAGTCCTATAAAATTTGAGGTTGTTGATGATAGGCTCAAAGATGATGAATTCAGAA ATCGTAGGCTATCAAATCTACAATCAAAGCTAAGAGCCCTTTCACTTGATAGTCAGAAGAATGTTGAAAGATCCCAACCA CGCCCTGTCACACCTTCTGCTGGCACTGGTTCTGAAGAGAAAAATTCATCTGAGAAAGTAATTAATAATACAGAAAGCAC TATTGATTTGTGTTCCAAGTCTCAAGCTTCTGAAGATGCTACTGGAGTTGAAACTGAAACACCACGTATGTCACAGGAAA GTGGGAATAATTGGGCCTCATTTGAAGCTTCTAAAGAGGACAATGCTCCTAAAACTCCAAACACCAACACTACCCTGAAA TCACCTACAATAGAAGCAAGACCTGAACCAAAATTCACAAATCCTTTAGACCTATTACTTTTTGAATTAACACCAACCAC TACCACGGAGATAGAACAATCATCTAATGCAACCCCAACACAAGCTGAGACACATGATGCACAAGACTCCATTGAAGAAG TTTCACATGCTCATACACCATCAAGTATGCAATATCTTCCTTCTGCATCAGTAGATTCTAGCCTTATGACACAACCTACA AGTGCACCAGCCGAAGTTGTTGTAGATAAACATAATCTGTCACCAATTGTTCCGACTAAAGATGACACTTTGTGTGATTC TATTGAACAATCTTTTCAAACAACCCCAGAATGTACTCATGACACCAAAGTCAATATTGTTGGCTCCCAGCCCAGCATAG TGGAAACAAGATCTATTGAAAGAAGGGAACTTCCAGAGGATCTTTTTACTGCAAGCTACTTATCTGGACCTGCACCACTT GCAGGTTGGCATAATGTTCAACCTCAAGGCATGGGCATGAGATATGGCATGCAGTTTTATCCTAGTGCAATGCCTCCTTC AACACTTCCATTTGCACCAAAGTCTACAAACCCGTTTGAAGCATCCGAGGGGAGAGGTCTAATCCATGCTGCATCATTTC CTACTATGGCTTCTTTGAATGGTGCAATGCCAACTGCATCACCCGAAACTGGCCTAATGCATGTTTCTAGCCTTGGGTCT TTAAATACAATGGTGCCTTTGTCCACAAGTTATGCAACACCCATTCCTCCACAGACTCCCTTTGCATCTGGAGCTCCTAC TGCCTCAGGTGTGTATTTTGATCAAGATAATGGGGAGCAACCTAGAAGGTCACAAAGAATTGATAGCTTCAATCGTGACA TAACTGGTTTTGGATCTCTAGATCCCATTCAACAATCATCTGGGGAATATGTGACATCAAGAACTCCAAATTCTTTTTCC AATACAAAGCGAAACCCATTTGAATAG
Protein sequence (LotjaGi5g1v0063400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGHHKKEDEKTEKVIRGLLKLPENRRCINCNILGPQYVCTTFSTFVCTNCSGIHREFTHRVKSISMAKFTPEEVTALQAG GNERAKHIYLKEWDSLRHSYPDSCNIHKLRDFIKHVYVDRKFTGERNYCTLPRVRLNDKEDSYESRKKSLFRLDFKSSHS SPGARSDDLSFRYLYDESKSPKYAQKYSRRGGLSKSPIKFEVVDDRLKDDEFRNRRLSNLQSKLRALSLDSQKNVERSQP RPVTPSAGTGSEEKNSSEKVINNTESTIDLCSKSQASEDATGVETETPRMSQESGNNWASFEASKEDNAPKTPNTNTTLK SPTIEARPEPKFTNPLDLLLFELTPTTTTEIEQSSNATPTQAETHDAQDSIEEVSHAHTPSSMQYLPSASVDSSLMTQPT SAPAEVVVDKHNLSPIVPTKDDTLCDSIEQSFQTTPECTHDTKVNIVGSQPSIVETRSIERRELPEDLFTASYLSGPAPL AGWHNVQPQGMGMRYGMQFYPSAMPPSTLPFAPKSTNPFEASEGRGLIHAASFPTMASLNGAMPTASPETGLMHVSSLGS LNTMVPLSTSYATPIPPQTPFASGAPTASGVYFDQDNGEQPRRSQRIDSFNRDITGFGSLDPIQQSSGEYVTSRTPNSFS NTKRNPFE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 128 | 128 | 6.4E-30 | ||
| PANTHER | 1 | 648 | 648 | 2.1E-204 | – | |
| PANTHER | 1 | 648 | 648 | 2.1E-204 | – | |
| SUPERFAMILY | 11 | 123 | 113 | 1.01E-31 | ||
| SMART | 12 | 130 | 119 | 6.0E-18 | ||
| CDD | 12 | 122 | 111 | 2.76431E-64 | – | |
| ProSiteProfiles | 12 | 123 | 112 | 16.803 | ||
| Pfam | 13 | 124 | 112 | 1.8E-26 | ||
| PRINTS | 24 | 43 | 20 | 1.0E-9 | ||
| PRINTS | 43 | 60 | 18 | 1.0E-9 | ||
| PRINTS | 61 | 82 | 22 | 1.0E-9 | ||
| MobiDBLite | 228 | 331 | 104 | - | – | |
| MobiDBLite | 228 | 323 | 96 | - | – | |
| MobiDBLite | 349 | 386 | 38 | - | – | |
| MobiDBLite | 349 | 365 | 17 | - | – | |
| MobiDBLite | 576 | 648 | 73 | - | – | |
| MobiDBLite | 618 | 648 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
Expression pattern of LotjaGi5g1v0063400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…