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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0064700 |
| Transcript ID | LotjaGi5g1v0064700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid-lipid associated protein PAP / fibrillin family protein; TAIR: AT5G19940.1 Plastid-lipid associated protein PAP / fibrillin family protein; Swiss-Prot: sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic; TrEMBL-Plants: tr|A0A151TZE7|A0A151TZE7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0064700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10837898..10845883) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGTAAACTAATAAACTAAATAATTTAAATAATGTGAGGTGAGATACTGAGATCCTCCAAAAGATAAGAGTTTGCAAA CGTGGCATCATAGAAATCCAATAATTAAACCCAAACTTTATTTTCATCCGACGTGGCTTCATTTCATTTCATTTCATAAT TTTGGGGGTTTGTCAGCGGCTTCGAACACCACCAGCTCTCTCTCTCTATCTATGGCTGCAGCAGCACCATCTTCTGCGTC TCTCCTCCTACCTCGTTCACTCACCGCCGCCACAACACGCCACTCCGTCAACCTCCGTTTCCCTCACCGCCGCCGCCCCC ACAACAGCTCCTTCAGCGTTTCCGCTTCCGTTTCCGTTTCCAACCCTGCCGTCAGAACTGGCTCCGATGATCTAGTGTCT TCTCTTCTTTCAAAGGTGATAATATCCTCATTTATTTATTTATTTTGAGTGAATATTCAAATGCAAATTAATTTCTACTA TGATTAAGCCTTATATGTACCCAAAAAAGCGCTTATATATACTTCTATTTTGAGTTTATTTCAATATGCTATGAATAAAT GTTTGTGCCACAAAAGTTTACTGTCATAAGTGATTAATTAAACTGTTTTCAAAAACACAATCTTAGAGTCCTCGATTGAT AGCTTAAGTGGTAAGAACTAACGGACATGTGGGGTTGGGTGGGGGAGGTCCAAGATCGACCCCTGAAGGTGTAATTTATC TTTCTGATGTAAAAAAAAAAAACAATCTTAGAATATATGTAAAAAAAGTAATGAAGTTCAAAAAATAAAAGGGCAAGTGA TGAAATATGTTAGGCGAACTAATTTAATTAATAATACACATGGACTCTTGTAAGAATTTTCATCCTTAACAACTAATATG ACTAACTAGGGTCTAATTATTTTACTTATGAAACTTTTAGTGATTTGTTCTTGTTTGGATGAGCTGAAGCAAATTTTGGA AAAAAACAACTAAGCACATTGGAATTAATTGTACCTTTTAAGCTGCAATTCTAGACTCTTATTAATAAGGCCGTACTCAG CAAGGTATGGTACTGAAAATCTTTTTATCAAGATCATAAGAATGGACTGTGATTAGAGTCATGAAATTTCATATGATAGA TTTTACAACAAGGCTTATGAATTGCGGTTATTAGTTTCGTTCTTCCATTCATTCAACATATATATTTATTTCCCTACTGA AAATTGAATTATTGACATTTTAATTAGGTGGTGCAAACAGATGGAGGAGTTTTACTGAAAAAGGAAGAACATAAAGAGGT TTCTGAAGTGGCTCAGGAATTGCAGAAGTATTGTGTGAATGAGCCAGTGAAATGTCCTTTAATATTTGGAGGTGAATCCT TATTGTTCTGATTAGCCTTGAGTTTTTGTTAAAACCCCATGACAGTATGTCTTCATATTCAATTCTCTGATTAGGGTGTT TGGGTGTGTTTGTTTTTTTATAAAATACATTTTGCTTTGTGTATAATATTGACGAAAATGCTTTTCAGAATGGGATGTGG TATACTGTTCACAGCCAACATCACCTGGAGGTGGCTATAGGAGTGCATTTGGTCGACTTTTCTTTAAAACAAAGCAAATG ATTCAGGTTGTTGAAGCTCCTGATATTGTGAGAAACAAGATCTCATTTTCCGCTTTTGGCTTTCTGGATGGAGAGGTTTC TCTAAACGGTATGTCATTTGATAATTCAAAGAATGAGTGCAACATACAAATGCTGATAGCGTATCCTAGAAAGCTCTATG TTTTAATAGAAAAACTGAAATTTCTTAGGGTCTGTCTGTTTTAAAGTTTAGTTGAATGAAGTTTAATAAATTTAACTTAA TTATAATTAAATTCGAGAGGATAGATTTGTGCGAAATGGTAATGTAAAAGTAAGGTTAAAAAAAGGTTTTGGATTGGATA GTAAGATAAAATTACTTTTGTGGTGTAAATATAGATATAGTTTGTAGATGAATGAATTGTTCGAAATAGAAAAGTATAAG TTCGCACTGAAGTCACATACTTTTGTCTAATTGGGAAAACTACCCAACACAATTCAGGTCAATGCTTTGTTTGGTAGAGA TGATTTTGTAAAGAGAGTTAGAGAGGGGAGAGGAGTCCAACCTTGTTTGGTAGGACTTAGGAGGGAGTGAGATAGGGAAG AGAGAAAAGTGGGACCCAAACCCAATACCTTTTTGTAGTGTCCCCAAATTGAAGAGAAAGTGGGAGAGAATGTGTCATTT TTTACTGTCTTACCCATTGTATCCATCTACCATTATCACACTTATTTTATTAATTAATATTTATATTTTTAAGGTATTTT TTGTCATTTACTTTAAAACAATCTTATTTCTTCTCACTCACTATTCAACCAAGCAAGCGGAGAGAGTGTCCATATCATTC TTTCTTTCTTTCTCTTTCTATAATACTCCCAAACAACCTACAAAATCTACTCTCTTCACCTCTCTCTCTCTACACTTTTT CTTCCCTCTTCTCTTTATCTCTTATAAACCAAACAAAGCATAAATGAAATTAATTTTAACACTAAAACGTAATTATTTTC AGCTAATGTTAATGTAAAACAAACAGGCTCAGTTTTGTGAAGTCAAAATCAAATGAATGAACAGTTATTGGATGATTTTT AAGTCATTGTCTCAATAGTAAAGCAAAAAATTGAAAGGAATGGTGTGGATTAAGATTTTGTTGCTTGGTCTCTAGCTTGT AATCCAGTTGATATTCAGTCAAACTTTCGTGCTGATTTGATGTATGCTGATAGGAACCCAGATATTAGTAGTCCTAGTAT TGCTAAGGTATTTGTTAGGAAGGGTAGAAAGGGAAATAAAATTGATTCCCACTAGTGATAACTGCCAAGCTGATGTGGCA GTATCTTCAGGGTGCTAGGAGTGTGAAAGAGAGAGAATGCTGAGGTGAGAATGGCTATATAAGCGTGTATTGTGAGAGAG AGGTTAGGCTTGAATTGGGTTTAGGCTTGGGACTTGGGAGAGAATAGAGGCACTCTCTAATTTGCCTCTGCTATCTTTTC GTTTTTCCTTTTCCCTGTAATCTTCTGCAGCACTGCTTCTGGGTTTCTACCAGAGGGTTCAGTGATATTATGCAATTCCA TCTCTATTTTCTAGTTCTATTCCTAGTATCTAATATTGTTTCTACATTTCCTTGCTGAAAACCGGGTTCCTAACATTGGT ATCAGAGCACCGATCTAGGTGCTGTGGTAGCCTTTGATTTGCTAAGATGTTTCCAGAATTTGATGGAAGAGTGGCTTATG GATGGATCATCACCGTAGAGCAGTACTGTGAGGCCAAGGGAATATCAGAGGAGAAGAAATTCTCAGTGGCGGAGAAGGCA TTGACGCGTGATGCTCTCCTTTGGTGGAACGACTGGAAAAGAAGAAATCAGAGGGCAACATGGATGGATTTTGTGATAGC TCTACTCAGAAAATTCGAACCAGATTCTGATTTGTTTCTGCCAGATCCAGTTCAAGATACTGGGGAGGAAGAAAAACAGA CGGATGAAACCAGAAAAGCCAAAGCCACAAACCTGGAACTGAGAAGAAATTGGTGTGAAGAATGGGTCAAGTTTCGTTGC ACTGGTGATGAACGGTTCGAAGGTGACTGGATTTCAGAGAATGAGGAAACTGAAGAGGATCTGACAGAGAACATCATCGT TGCAAGGGAAGAGATGACCATTGCTGCGAAACTCCAGATCTGCGACACTCTTCAGGAATCAAGAGGTGAGGCGGCGGGAG TGATGCTAAGTGTCAAGCAACCACCACCACCGGAGATGATAAATCAGGAAGAGAAGAAGATCGAACAAGTACCACCAGAC CAATCATATCGTGGGGCAGCGCTAACATCGGCGACGCCCATGTTCATAACGAGGACAAGGTCAGTTTACGACCAACGGTT GTATACTCTGCAGGCAACGGAAAGCGGATTGGCCAATTTGCCACCACCACAACCACCAGATAAGTCGTGTCATGCGGTGG TTGAAGAGACGCTCAGAGGAGCAAAATGGAAGCAAACTCAAAAACATCCACCACCAAAACCACCGGAGTACTTGGACTGT GGATGTAATCCGGCGGCGTACGCCACAACGCCGGCGCCGGCGAGGTCGGAGGACAAGGCTACACCGGCGACGAGAATGAG AGAGAAGATAGCAGAAGTTTCTAGACGTCAGAAGGCAAGTGCATGGGCAAAGTGGGTGAAACAGGAATTGGACCCTTCTC TCAGCATAATGGGCCTGGCCCAACGTGATAGTAGCTGTGTTGCAACAGGTAATTTGCTTCTTAAACTTCTGATTGCTTTT GGCAAAATAGAGAGAAAGTTACAAAATTTGGGCCCATTATATGAATCAATAGATTGTGGCCCAATAACTGAAAATAGAAA TAAGCCTTCTCAAAAAGGGAATCAGATATGTGGAGTTCTTCGTACTTGTGTTATAGTTCATCTATGGTTGAATCCCAAGA TGTTTATGGATGCTAAACATGGTTCAATTGTTCAAATATCCTTCTTTGAGGCTAGCAACCTACAAGTTCTCAAAGATTCA TCTCTTATTCATTCTAATGCAAACTTGGGAGTTCGTGGACAAAGCTTTTTGAACTTGTCTGAACTTGGAAATTTGATTGA AGCCCAACATCTAATTTTATCATTACTTACTAATAGCAAGGTTGGGTCTAGACCTGTTCTAAGAGGTCCTTTAGAGGTTT CTGGAGAAGATAACATGATGGTAGCACAACTCTACTGGGAAATTGAAAATGGCATGGTGGAATTGCCTCATCCTCCTGAA AAGTGTAATAAGAATTCTTCATGGATTCTCACACTTCAGATATGTCGGGTTGAAATTGCTATTGTTGAAGTAGCCACAAC TGGTTCGGGTTTGCGTTTTCCCTGGATTAGAAGGCTCTCAGTAGAAGTGAGTATAGATGTGGATTTTCCAACAATAATAC AGCTCCAGGTACAATCTAAAATACCATTCTGCAGTACTTTAAAAGCTCTTACTCCTAATGAGATGATCAAGCAAGGGGTA CAAGCTGTTTCCTTTCACAACACAGATGGAATTTGGTATGTGAAGTGGCAGAAAGATTCTAAGTCATGCTTACTAGACTC TTGTGTAATTTACATGATATTGAGAGTTGTTAAAGCAGTTGCTAAAAACACAAATAACATTCCAATGGAGAAGCACATGG ACCCCTCCTATGTCATTTGCTCGTTGGAATACGGAAGGTTGACCCAGGAAATTCAGAAGCTCATTGAGGGGGAAGGTGAC ATAGTTACAGTAAGAGTAAGAATGAAGAACACAGCTGTCTGCATTATTACCACAATGACTTGTAGTACACTTGATGTCAA GAGGGCCAATGAAGAGACTGAACAACAACCGGTGATCTCTAGCCATATGTTCATCTCTAGAAGGGTGAGGACACCTGACC TTGTTGCCCAGGCTGTCTGCTATGCTTGCACACAAGCTGATTTTGCTGAGGAAATTTTTAGCAAGTCCTGGACACATATG ATAGCAGCTAAGACTCTATTGCTTGGGTTGCTTGTTGCGATTGAATGCAAGATGAATACATGGGACCCTGGAGGTTGTTC TTATTTTTCAGCAACGACTTGGTCTACATCCTGTTTCAAACAATGAGATTCAGGAGGTGTATTACTGAGTCAACCTCTTC CGTCTTGCTTAAATGAAGAGGGGGAACTGCAACCTGAACTTGAACAACTACTGATTTCAAGATCTGGACAGCAGGGAGAT AGGGAAGTGCCTATGAAGTGGAAGACCCTACCTGATTCTGACAGCTCATGGGAGTCCTTGGCAGCCATGAAGGAATGTTT CCAACTTCCATCCTTGAGGACAAGGATGTTTTTGAGGAAGGGAGAGATGATAGGAACCCAGATATTAGTAGTCCTAGTAT TGCTAAGGTATTTGTTAGGAAGGGTAGAAAGGGAAATAAAATTGATTCCCACTAGTGATAACTGCCAAGCTGATGTGGCA GTATCTTCAGGGTGCTAGGAGTGTGAAAGAGAGAGAATGCTGAGGTGAGAATGGCTATATAAGCATGTATTGTGAGAGAG AGGTTAGGCTTGAATTGGGTTTAGGCTTGGGACTTGGGAGAGAATAGAGGCACTCTCTAATTTGCCTCTGCTATCTTTTC GTTTTTCCTTTTCCCTGTAATCTTCTGCAGCACTGCTTCTGGGTTTCTACCAGAGGGTTCAGTGATATTATGCAATTCCA TCTCTATTTTCTAGTTCTATTCCTAGTATCTAATATTGTTTCTACATTTCCTTGCTGAAAACCGGGTTAGGCTAACATAT GCTAAACTTGAAACAGGAAAACTGAAGGCTCTGGATACTGAATGGATTCAAGTTGTATTCGAAGCACCTGAATTGAAACT AGGATCATGGGAGGTTCAGTATGGCGGCCAGAGTGAAGTTAAACTCCGAATAACTTATGTTGATGAAAAAATCAGGTTAG GATTGGGTTCCAGGGGTTCCCTCTTTGTCTTTCAAAGAAGATGAAATCGAAATGCAATGAATCAGGAGAAATCTGATGAG TGTGTAACTCTGCACAATTTGATGTACAATATGATTATCTGTGTATATTAGTAAGAGTTCAAATAGAAAATCTTTTTGAG ATCGCATTACTCAGTTGCAGAGTTTGTCTCAAAATAGATTAGTTATAGATGCTATGGCGCAATTAATTTGCTACCGAGAC AATCTTCCATTGTGCAAATTCTGAATACTCATCAGTGGTTGGGATGGATTTGCAAATTCTGAACCATCCTGAGCAAATTA TTAGAATACTAGTGTCACTCTATATTCTATAAATAGGGAACTCATTGTAATATTTTCATCATCTTTTTCATAATGATTGA CTATTGGAATCAATACTCTAATTCTTTTGTTTGCTATGTTCGGGATCCTCTCCTGGATATCCATATTCCTTACATGGTTA TCAGAGCTCCAACAATGGAGCTCACTGCCTCTTCCGCCGCCGTCATGTTACAATCAATACCTTTGACATGCTCGTGATTT CAAGCGCTGCCGCCGCAACACCACCGCGAGATCATCTTCCTTCAATCTCTCAGAACCCCATGATTTGTTTACTGCAAGTT CACTCTTCTACAAAAGATGCTAGAGTTTTGATTAATTGAAGTATGAGTTTAATATTTCAAATTCATCCACTATCAAATTA AATTTTACTGGACATGCTCTTGAAGTCTTCATATTGCTTCACACAAAGACCCTCTTCCGACGCTCTTCCTTTCAAATTCA ATCCATTTTCATTGTGTGCAAGGATGATGTTGATGCAGTAGTTCTCATGTTGTGGTTTTGGATGACATGGAAATTAATTT GTGCTTTGATGAAGCTGATTAATGGTGGGTAAATATATTTACATCAGTGGAAGTTCAGCTTGGTAGACCTGAGAAGAAAA GGAAAGTTGTGGGAGCCAGTTGCAGATAATGGAGATGATGGCGTGCTTGCTGAATCAAGCTTTAACTAGACATGTGTCAA GTATTACTCACAAGTTGAAATAGATGCAGTTTTTTATTTTTGAAGAGCTTATTTCTCAAGCAACAACTCTCCAATTCATG TGATGAAATTCTTGAAAATTGCCTTATTTGTAATGCCTTTGGGTATGCTGTTCAGTCATTCTTGCAGCTCTTGGATCGGT TCAACAAAATGATTTTTGTGCAACGCCATTACAAGATGAACCATCCCCTGATGATATATGATGTAGCCACTCAAGAGGCA CATTGTAAAAATCTAGTAGCAGCAGCAGGGAGCATTAAGACTTTTGTAGTGTCCATACTCAGAATTTGTTTGTTCATGCA GTTGATCTAGGGAACATTTTGTATCATGATTTAAGGAAATTATTTTCGAATTTCATTATTAATTACGAGAGTTAATAATT TCTGGAAATGCAAATTAATTATGAGGTAAAAATGAATTTTGAAATTTAAAAAAATTCAGAAAAAAT
CDS sequence (LotjaGi5g1v0064700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCAGCAGCACCATCTTCTGCGTCTCTCCTCCTACCTCGTTCACTCACCGCCGCCACAACACGCCACTCCGTCAA CCTCCGTTTCCCTCACCGCCGCCGCCCCCACAACAGCTCCTTCAGCGTTTCCGCTTCCGTTTCCGTTTCCAACCCTGCCG TCAGAACTGGCTCCGATGATCTAGTGTCTTCTCTTCTTTCAAAGGTGGTGCAAACAGATGGAGGAGTTTTACTGAAAAAG GAAGAACATAAAGAGGTTTCTGAAGTGGCTCAGGAATTGCAGAAGTATTGTGTGAATGAGCCAGTGAAATGTCCTTTAAT ATTTGGAGAATGGGATGTGGTATACTGTTCACAGCCAACATCACCTGGAGGTGGCTATAGGAGTGCATTTGGTCGACTTT TCTTTAAAACAAAGCAAATGATTCAGGTTGTTGAAGCTCCTGATATTGTGAGAAACAAGATCTCATTTTCCGCTTTTGGC TTTCTGGATGGAGAGGTTTCTCTAAACGGAAAACTGAAGGCTCTGGATACTGAATGGATTCAAGTTGTATTCGAAGCACC TGAATTGAAACTAGGATCATGGGAGGTTCAGTATGGCGGCCAGAGTGAAGTTAAACTCCGAATAACTTATGTTGATGAAA AAATCAGGTTAGGATTGGGTTCCAGGGGTTCCCTCTTTGTCTTTCAAAGAAGATGA
Protein sequence (LotjaGi5g1v0064700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAAAPSSASLLLPRSLTAATTRHSVNLRFPHRRRPHNSSFSVSASVSVSNPAVRTGSDDLVSSLLSKVVQTDGGVLLKK EEHKEVSEVAQELQKYCVNEPVKCPLIFGEWDVVYCSQPTSPGGGYRSAFGRLFFKTKQMIQVVEAPDIVRNKISFSAFG FLDGEVSLNGKLKALDTEWIQVVFEAPELKLGSWEVQYGGQSEVKLRITYVDEKIRLGLGSRGSLFVFQRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 13 | 12 | - | – | |
| PANTHER | 13 | 231 | 219 | 1.0E-114 | – | |
| PANTHER | 13 | 231 | 219 | 1.0E-114 | ||
| Phobius | 14 | 19 | 6 | - | – | |
| Phobius | 20 | 231 | 212 | - | – | |
| Pfam | 61 | 190 | 130 | 6.6E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0064700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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