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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0064800 |
| Transcript ID | LotjaGi5g1v0064800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT4G31350.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|C3PMI9|GATB_RICAE Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TrEMBL-Plants: tr|A0A072VDW2|A0A072VDW2_MEDTR Core-2/I-branching enzyme; Found in the gene: LotjaGi5g1v0064800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10857982..10865559) extracted from Lotus japonicus Gifu genome v1.2.
CGCAACTTGAACAAGCTGGCAGCAATGGGGAGCAAGACTTAAATCCCAAATCTTGTTTACATGTACCATTACACTATTAT TAATTAATATATGATTTTAGTTAATTACAACAACAACAACACCGGAATCAACGCTGTCCATTTGGCTTTGCAAATCTGAG CTTCCGATCTAACCACGCACTAGCAGGCGCAGCCAGCAAGAACAAAACAAAACCACCGTTGACATTCTCGATGGATGAAC GATGACGATTTCGCCTCTCTAGCCCAATCTCATTCGTTCCTCTCTTCCTTGAATCCACACTCTTAAAACTTCTACAACCT TCGTTTTTTGAATTTTTGCCTTCGATTCTGGTTTCTCTTCAATTTCCCCTTCTCGCTGGGAGCATCTTCCCTCAGATCAT TGCATTGGATTCACCGCAGGTACTCATTCATCCATTCATCTCATACGAATATTTGAAGATCTACACGATTATGAAAGACA GGCATAGAAGTAGTGAGATCTTTGTTCTGTTTAAGATTAAGATCTGTGTTGTGTTTGTTGAGTTGTTGCTGAGGAGAAAA GAATTGAGAGTTGTTATATATGTTTCTTGTTTTGCGGTTTAAGAAACATGTTACTGGTTCCTGAAGCATTGTGCACGTGT GTGGTTTGTTTCATTTTTGGTTCTTGGTAGTTGAAACTTGAAGTAGTACTGTACTTATTATGACTATGTTGTTCTTGTTT TTTTTATTGTTTGTGTTTTTGATTACGTATGAATGTCTGTTGGCAGCGAGACATTGTAGAATGTAAATGGGGAAGCTGCG GCTGCTGCTGGGGTGTGTGGAACTTAAATGAAGGAGAAAGAATTTGCATGGCCGCAGTTTATAAGAAATATTCTGATCAT GGTTGGATCGAGAAACCGGTCGCATTTAAAGAGGCCCACTTGGATTATTGTTTTGCTCTCTATAGTCTGCATTTTTCTGG TTGTAGCTTTTATTTATCCGCCCCGGAGTCCCTCCTCAACATGCAATTTCTTTAACTCTCAAGGCTGCGGCGGTAGTACC ATTGATCTGCCACCGGAGGCGCATTCCCGGGAAATATCTGATGCAGAGAGAGAATCTAGGATTGTTATTAATGAAGTTTT GAAGTATTATGCTGTCCAATCCAAAATCCCTAAAGTTGCTTTTTTGTTTTTGACTCCGGGTTCATTACCTTTTGAGAAGC TGTGGCATGTGTTCTTTCAGGTATGGCATTCCTATTACATTTACCATAAACTCTGCTTTCTTGTTTTATTTATAATTTGA TTCTACAACATGTATCTTGGGTTCTTTAAGTTGTTTTCTGCTTCTGCAAATATAGCTACGTACATCAGTGTTCTTGATAG GAACTAGTTTGAGTCATGTCATCCTGTTTAAGTTACAGTCATTTGACTGTTACTCCCAGATTGGGTTTTGGGAATATAAA TGGAGGAGTGGTGGATAGAGTCCGATTTTATTTCCAGTTATTTATGGTTGGAGATTTATTTAGATTTTTACAGAAAAAGG CATTATGAAGGAAACAACAATTTCTGTTGACGAATCACATGCAAAGTTGTGGAAGATAAACTATTAAACCTTTATTTGAT TAGCATTTAAAAATGTAGGCGACATTTGATTATTACGAAGTAAGAATTTGTGGATATTTATTTTTGTCCTTTCTGTGGGG ATGCAAAGTCAATGGTTTCTCCTTTCTCATTTTGGTCATGATCATTATGATCTGAAAGAATTATTTGCAATTTTGATCTG AAAGTGTGGCTATCATCAAATCTGCATGAAGTCGGACATTACAAAGCAACCTTTCGAACTCCTGAGGGACATTATGAGTA TTTAGTAACGCCCTTCCAACATTTCAGCCCTTTACTAACCATATTTTGGTACCTCATTTGCTGAAATTTTGTTGGGCATA TGTGCCTCAATGCATGTTTACTAGAGAAAGAAGAGAGGCAGGGAAGGAATGGGCAGGAATGGAAACGTGTTACAGAAGTC TGTTAGGAGGGAAAGGAAGGAGTCTAACACAACTGACACTGGGTAGCATGATAATGGAGAAGGATATAGGAAGGGAGAGA GGTGGAAATATGATGGAGGGAGCTGGGCGAGAGGGAGTTTCAAATTTGTGAAGGAAATTCTGGGAGGTTTTGGCCTCGAG GCAGTGTAGCTTATCTTAGTTTCTCTTTTATTTTCGATCTGCTTCTGCTATTGTCCTTCTGTTTTTGCTACAGTAATTTG AGAACTGCTCTAAACTTGTTCCTTTCCTGCAGCACCAGAGTGAATACCATGATTTACGAGTGGCATAATATTCTCCTTCT ATTAAAATATCAATGCTTGTTGTGCTGGATGTAATTACCAAGTGCAATTCCTTTCCCTTTGAATGTGAGATATGTTACTT TGTATTTATTTGGACTCCTCTTATAATGAAATGCAGGGCCACGAGGGCAAATTCACTGTATATGTACATGCATCAAGGGA AAAACCAGTTCATGTCAGCCCCTATTTTGTTGGCCGAGACATCCACAGTGAACCGGTATGGGGTATAGCTCATGATTTGA ATATATATATACAAACTGTTTATATGACATTTTCAAGTTCTTAAGGATGATTAAAGATGTGCTCAGTTTATATAATTTGA AGTATAATTTTAATTAACGTGACCAGAACTGAATGTGTTATAGAACTGATAGGAAATTTCAGGGAATAAGCTTTGATTAC AAAGGAAAATTGCAGCCAATGTATAATGATAAAGGAAAGAAAAGTAATCAGAGAAGGAACAACTTCTTTGCCCAGGCAAA AAGGCACCCCACCCTACCCAAGTGGTTGCCCTCGTCACTACCTTCTATTTTCTTTCACTCAACCGAGCAAGGCACTAGGG CTTTACTTCCCCTTCTCTACATTAAAATTTAATGCTATTTTTGACATTGTTTTTCTACTAGCTACCACAAAACTACCCCT TTGACAATCACTTAGCAAGGAGAACTATTGATCATATGAGACATTTAATTTCTATTTACACAAAGAATATAATGGTGAAC TTCGTTGATAAGATGAGAGTGTAATAAAATCTATTTCTAATGGGAACCGGAACAATAAGGTCATTGTGAACACTGGATAA AATAAGCAGACTTTCTTTTATTCTTATGATTATCTGGTACTTAACATGTATCACATGTATCCACTTTTCCCAAAGCCATG CAATCTGTTTTATAGTAGTTTGTTCCAACTGGTTTTCAATTTCTTTCAGGTAGCGTGGGGAATGACTTCTATGGTTGAGG CAGAAAGGAGACTTTTGGCGAATGCACTGTTAGACCCTGATAACCAACATTTTGTCTTGTTGTCTGATAGGTATTTTTGT TGTCTGATTCTTCTTTTTGCTGTTAACTCGAAAGTTTGTTTGTGGGATTGAAAGTTGATTTTCTGTTCACTTGTGCTTCA GTTGTATACCTGTGCGCCGCTTTGAATTTGTTTACAACTACTTATTATTAACAGATGTCAGCTTTATTGACAGGTAAGTA ATTATTAAATAGGCTTCTACAAATTAGTTGAAGAAATTCTAGAAACTTTTTCCTTTCATGAAAATTCTATGCTGCAGATT TATTGGATGGCAATTTGGTCTAATCTGTCTCTATTTTCCCCCTTGCCTTTTCTCAAAAAAAGCTATGTGGATCATGGTCC TCATGGAAATGGCAGGTATATAGAACATATGTTGCCTGAAGTAGAAAAGAAGGATTTCCGAAAGGGTTCTCAGGTATGGA TGTTATCTACCTGTACAGTAAAATTTAAGCTTCCACTTAATTGCAGTGTTTGATTCAGATCACTCTTCAACTCTCCTATC CCTTTCACTTAGCCTGACAGCGGTTATTTGATTTTCACCATGTCATACATTCTCATTTTGATATGGTACCTTATTGAAAC TATGGGGTTTAAATATTTGTAAAGATGGAAAAGAATTAAAAGAAGAGAGACAGAGAGAACTGTAATGGGATGCCTTGCTA GGTGTTGTCTCTCTAATATATATAATACTAGGTTAAGAGTAAAGTACAAAGTACGAGATACTAGTACATACGGGTCAAGT ATACACTCAATAATCTATAAGTCTAAATCATAATCCAAACTCTTAATACTCCCCCTCAAGCTCGAGGATAGATGCTAATC ATGTCCACCTTATTACAAATGAAACCATTACGCACCCCACTCGAAGTCTTTGTAAAAATACATCTGCAAGTTGGTCACTT ATGGTAACATAGGAACTGGAGATGAGGCGCTGTTGAAGCTTCTCCTGGATACAGTGACAATCCACCTCAATATATTTTGT CATTTCATGGAAGCCATAATTTGAAGAGATATGTATTGAATCCCAGTTATCACACCACAGTTTCATCAAAGATGTACTCT CAACTCCCATCTTGACTAGAATCTGTCCTACCCACAAATGTCAACAAGTATTTTGAGCCATAGCTCGGTATTTAGCTTCT GCAATTGGTTGTGCCACCACATTTTGCTTTTTACTTTTCCATGATATCAATTTTTCTCTCAAAAATACACAATAGCCTAT GGTAGATTTTCTATCCATAAGGGATCCCGCCTAGTCAGTATTCAAAAAGGGCTCTGCTCACATGTGTCCATGATCCTTAT ATTTTATATACAATACCTTCTCCCAAAGCTTTCTTCAAAAACTTAACGATGCGAATTAGTGCTTCCTGACGTTTGAGACG GGGAGGACATAAGCTGACTTACAACACCCACTGGGAAAGTGTTATCTCACTTGGTTGACTTTCAGAGTGTTATTTCGTTT GCTCATTCATCTCCCTCTAATTTATAGAACCATTCATCAAAGTAGTGATCTGGATGAATTACAGCTTTGTTATTACAAGT TCAGACATGTAGGAAATCAATGATAGCTTTTCTGACATGCAGCTGATTTGGATCTTGTTTCTAATGCAGTGGTTCTCAAT GAAACGGCAGCATGCTATCATAATTATGGCAGACAGTCTATATTTTACAAAATTTAAGCATCATTGCAGGGTATGACATC ACTAAGTATCACTATTACTTTTTTGTTTCTTAATCGGATGGATTGTTTGGTGATGCATTCTGTATTATTCCTGTTACCTT TGTTAAGAATGTTAGTGTAGGTAAGTTTGTGTATGATTTGTGAACTACTCTAATCCATTATTTTGATTTACATTTTTTGT CTTCTGTCTCTTAAAAATTAAATTTTAACTTACTCCCCCCCACTGTCAAAAAAATAGCGAAATAACTTGTTAGAGCAGGA TATAAAAAGTTAGTAACTAGCCTACACACAAGTAGGTTTGCTGGAAATTATTAAATGATTACATTTGTTACGGATTTGCT GCACTTAAAGTAGCTTGAAAATGTTATTTCTATCATAGACTACAGGTTCTGTTCTTCTGGTTTTGTTCTTTCTTTTGCTC ATATGTGATTACTTACCCTCATGTATGCAATTCTCTTTTTTCTTTCACTGTTAAGAAATGCATATATTAGAAGTATAGAA GTTTGCAATAATTTTTTATTCAGAAACATCGTCAGTAGTGTACTTGCTGCAGCATGTATGAGCTTTTATAAATTTTTGAA TTAACATTTCCTAATAATGACTAACATTTATCTTATATTATTTTATTTTTTTACTGACCAAGTAAAAAAATAATGGTTTC TTTCTTTGTTTCCAGACTTAGTATTTTACTGTCTTCTGTTAATGCTATTTTTAACAGTTCTTGGAAAGTAAGGAATCTTC TAGATAGCTTCTCTGACAAATTTCTACTGTTCATGATTTAAATTCCCAGCCAAATATGGAGGGAGGACGCAATTGCTATG CTGATGAGCATTACTTGCCAACCTTTTTTAATGTCAGTGCACCAATCTGTTCTTTTTTGTTGTGCAATGATAGACATCTC TCTTTTTCTCCCTGCTAACTCATTTAGTGTACGTTTAGATGCTGGATCCAGGTGGAATTGCAAATTGGTCGGTAACATAT GTTGATTGGTCTGAAAGAAAATGGCATCCGAGGTCATTCAGAGCCCATGATATTACTTACAAACTCATGAAAAAAATAGC AGTACGTAGCAATTTTTACTCTCATTCCCTTTAGATGCTTTTGTATTCATTATGTTGAATCATCTAAGGAAATTGTTTCA TATACATAACACACACACACAAACATATATATAGTGTATTGTTCAATACTTCAATGAATTAAACCCTACAGTACATAGCT GACATACCAAGTCATTGACGTCCAAACAAAAAAAAATTACTGAGTTACTTCCTTGTCTTGTCTTTCTCTTGTTAATTGAC AAGGTTCTAAAACAGTATTTATTCTATTTAATGAAATGATTTATTCATTGCAGTACATTGATGAAAGTCCACATTATACA AGCGATGCAAAGGTATAGGATCTCCTTCATCTATTTTAGGTTCAAAGGTCCTCCATGTTATGATAATTGCTTCTGTTTCT GTTGAAGTAATGCATTAATATTTGGTTTTCATTTTCATTATGCCTTGCAGAGAACAGTGGTGATTACACCTTGCATACTA AACGGCTCAAGACGTTCTTGTTATCTATTCGCCCGGAAGTTTTTGCCAGAAACTCAGGATAAATTGATACAAATTTACTC TAATTATACAACATTCTGAAATATTTAGTACACTATATCATTCTTTGGTGAATCAACCATGTGATCCCCAGCCTCAACGT CTTGCACATATGACAGAACCTTTAATTTTGGGAGGTTCCCTAAAGCAGCTGGATAAATTTCTCAGGAAGAAACAGAAGCG GGTTTAGTCGAGGTTTCCTTTTCTGGGGCTTAATGAAACTGCTGAGCTTGTCTGGTTGGATAATTTGATCTTCCCATTTT GATTTCTTATTTATAATATTGGAATCATCACAGATTCTTCTGAAGGATGGAAAATTTTGATATCCTTGATAGAGACTAGA AAGGGAGGGATGAGGTTTGGTCTTGATTTTGACAGTGGAAGCTAACTGTTATTTATCACTGTAATAGAATTGAAAATTTT ATGCAGCCATGCATTAAATATAACTTCGGTGATGGTTCAGCAGTCATGCAGAGAATTTTGCTGAGTTTGTCTCTTTTGTT TTTTAGATTTACAAATCGGTGGTTTTATATGATGGTTTTGGAAAAAGATTTATTTTGAGCATGCCGTATTTGATTATTTT TATACAATCGAAGGCCAGTTTGGTATATAAGTAAATATGAAGATGAAAATTGTATTAAATATCGAAATTAGTTTAATTGT GATGCATTTCGGTGTTAAACAGTTTAATAACAGTCCATCACAATTAGTTGAAACAATTACATTTGTTTTTAATTTTAGTT AAAATAGAAATAATTTTTTTGAATTGATAGAATACAATTAAATGTCTGTGTAAACTAAACAATTTATACTGATGAGTGCA TTAGTTTACATTGATAGTGCACGAAAAGATTATAAACACATATTGAAAGTGCAGCAAAAACTTGTGGATTTTTCATGTTT TCAATCTTCACTTACTACTTTGTAAAAAAGTAGTGCTTACCATTAAATTTTGGTGCTA
CDS sequence (LotjaGi5g1v0064800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGAGAAAGAATTTGCATGGCCGCAGTTTATAAGAAATATTCTGATCATGGTTGGATCGAGAAACCGGTCGCATTT AAAGAGGCCCACTTGGATTATTGTTTTGCTCTCTATAGTCTGCATTTTTCTGGTTGTAGCTTTTATTTATCCGCCCCGGA GTCCCTCCTCAACATGCAATTTCTTTAACTCTCAAGGCTGCGGCGGTAGTACCATTGATCTGCCACCGGAGGCGCATTCC CGGGAAATATCTGATGCAGAGAGAGAATCTAGGATTGTTATTAATGAAGTTTTGAAGTATTATGCTGTCCAATCCAAAAT CCCTAAAGTTGCTTTTTTGTTTTTGACTCCGGGTTCATTACCTTTTGAGAAGCTGTGGCATGTGTTCTTTCAGGGCCACG AGGGCAAATTCACTGTATATGTACATGCATCAAGGGAAAAACCAGTTCATGTCAGCCCCTATTTTGTTGGCCGAGACATC CACAGTGAACCGGTAGCGTGGGGAATGACTTCTATGGTTGAGGCAGAAAGGAGACTTTTGGCGAATGCACTGTTAGACCC TGATAACCAACATTTTGTCTTGTTGTCTGATAGTTGTATACCTGTGCGCCGCTTTGAATTTGTTTACAACTACTTATTAT TAACAGATGTCAGCTTTATTGACAGCTATGTGGATCATGGTCCTCATGGAAATGGCAGGTATATAGAACATATGTTGCCT GAAGTAGAAAAGAAGGATTTCCGAAAGGGTTCTCAGTGGTTCTCAATGAAACGGCAGCATGCTATCATAATTATGGCAGA CAGTCTATATTTTACAAAATTTAAGCATCATTGCAGGCCAAATATGGAGGGAGGACGCAATTGCTATGCTGATGAGCATT ACTTGCCAACCTTTTTTAATATGCTGGATCCAGGTGGAATTGCAAATTGGTCGGTAACATATGTTGATTGGTCTGAAAGA AAATGGCATCCGAGGTCATTCAGAGCCCATGATATTACTTACAAACTCATGAAAAAAATAGCATACATTGATGAAAGTCC ACATTATACAAGCGATGCAAAGAGAACAGTGGTGATTACACCTTGCATACTAAACGGCTCAAGACGTTCTTGTTATCTAT TCGCCCGGAAGTTTTTGCCAGAAACTCAGGATAAATTGATACAAATTTACTCTAATTATACAACATTCTGA
Protein sequence (LotjaGi5g1v0064800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKEKEFAWPQFIRNILIMVGSRNRSHLKRPTWIIVLLSIVCIFLVVAFIYPPRSPSSTCNFFNSQGCGGSTIDLPPEAHS REISDAERESRIVINEVLKYYAVQSKIPKVAFLFLTPGSLPFEKLWHVFFQGHEGKFTVYVHASREKPVHVSPYFVGRDI HSEPVAWGMTSMVEAERRLLANALLDPDNQHFVLLSDSCIPVRRFEFVYNYLLLTDVSFIDSYVDHGPHGNGRYIEHMLP EVEKKDFRKGSQWFSMKRQHAIIIMADSLYFTKFKHHCRPNMEGGRNCYADEHYLPTFFNMLDPGGIANWSVTYVDWSER KWHPRSFRAHDITYKLMKKIAYIDESPHYTSDAKRTVVITPCILNGSRRSCYLFARKFLPETQDKLIQIYSNYTTF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 5 | 394 | 390 | 1.3E-207 | – | |
| PANTHER | 5 | 394 | 390 | 1.3E-207 | – | |
| Phobius | 31 | 50 | 20 | - | – | |
| TMHMM | 32 | 51 | 20 | - | – | |
| Phobius | 51 | 396 | 346 | - | – | |
| Pfam | 110 | 340 | 231 | 6.4E-77 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi5g1v0064800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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