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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0066700 |
| Transcript ID | LotjaGi5g1v0066700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY family transcription factor; TAIR: AT4G31550.1 WRKY DNA-binding protein 11; Swiss-Prot: sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11; TrEMBL-Plants: tr|A0A072VCI7|A0A072VCI7_MEDTR WRKY family transcription factor; Found in the gene: LotjaGi5g1v0066700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:11065651..11070111) extracted from Lotus japonicus Gifu genome v1.2.
CATATTGTAGCAGATTGTCATCGTTTAGTTTCTCAATTTCATTCCGTTTCTATTTCTTTTGTACGTCGTAGTGGCAATGC GGTTGCGGATTATTTAGCTCGTCACGCTTCCTCTTTTCTAGGGGTTGTCTGGTTAGAGGAAGTACCTAACGAGGTTTTAC CGCTTGTGGACTCTGATGTATTGACTTCTATGCCTAGTTCTACTTAATCTATTTATGAGTTGAATTTCAAAAAAAAAATA AAAAAAATAAAAAAATAATAAAGAAATCAAAACCCACTTTGACTTTGCAACACCCTCTCTCTCTCTTCGTTATCTCCAAT ATAAACCCCTCCTCCCCTCTACTTTCAACCCTTCCAAACCCACTTTCCATCTCTTCAATCTCTAAACATTTTCTCCTTCT TATGGCACACTGAAACTGGGTCTTCATATAATTCCCTCAGTCCCTATCTCCATTCACATCAAATGGCAGTGGAACTCATG GGGTTCCCAAAACTGGATGAGCAAAAGGCCATTCAGGAGGCCGCATCAGAAGGCCTCAGGGGCATGGAACACCTGACCCG AACCCTCTCCCATCAACCCACCCACTTAAACACTCACCTCACCGACCTCACCGTTTCCAAGTTCAAGAAACTCATCTCCC TCCTCGACCGGACCGGCCACGCCCGGTTCAGACGAGCCCCGGTCCACCCACCACCGGTTCACCACATCGCACCTTCTTCT ACCTCCTCCTCTCTTCCTTCACTGCAACCGCTAACCCCGCCCGCTCACTTCGCCGCTCCGGCGCCGGTCTCCATCCGCCA TGCGCCGGCGAGCTTCGTTCCGGCGCAATCGCAAAGCTTGACGCTTGATTTCACGAAGCCCAACGAGGCCGTCCTGAGCA GCTCCTCCAACGCCAAGTCCGTCGAGCTCGAATTCTCGAAGGAAACCACGGCAGCCTTCAGCGTCTGCTCCACCTCCTCG TTTTTGTCCTCCGCTATCACCGGCGACGGCAGCGTCTCTAACGGCAAGCAAGGCTCCTCGATCTTCCTTGCGTCGGCCAC GCCTCAACCGGCTTCCTCCGGCGGGAAGCCGCCGCTGTCGTCGGCGCCGTTCAAGAAAAGATGCCATGAACACCGTGAAC ACTCCGGTGACGTTTCTGGCAACAGCAAATGCCACTGCACCAAGAAACGGTACGCTGCGTTTCACCCTTTCATTTCTCAA TTTTTTTCCATTTTTAATCAACCGATTTTATTTGTTTAATGGTTAAATTAGTCTGAATTCATAATCGAGTTTTATTTTAG TCCTTTTAAAAATAAATGATGTTTAGCGACGGTCAAAAACATTAAGTCATTGAAAATAATCGTCGTTTTTCTTGAAATAA ACTAAAATTAAGCTCGCTAACAAACTTAAATTAGTTAAATATAGATTAATTCCACTATTAACCCTATATATATATATTTT TTTTTTGGTGAAAACTGGCTTTTTTTTGTTTGACTTGTTCACATTAATTATGCAAGTAACAAATTGATGTGGGTACCACA ACAATAGGTTTTTTCTTGGGGTCAATAAACCTTTTTCTTTTTGTGAACTTAACGAATCACGTGACCCGGTCGCGAAGGTG GGGCTAGGCAGTGTTTGGGAGTCAACGGTTTCGGTAGTGGTTTTGGCAAACGCATTAATGGGGACAGCACGCGTGACAGT GACAAAACAACAATAAAATTAAAACATAGGTTCCTGTGTCAGTGTGTGTCTGCCTCTTTTGTCAATAAGCGAGTTTTTAG AAATTGCTGTCTGACTAAGCCAAACTGAACCTTCCTTTCTCCTTTTACAGTTTTACCCCTTCTTTGACTATTGACCTTGA TTATGTGTCTACTTTGATTTTTTTTTCTTCATAATTCTAAAGATAAAGAGTATTTAGGGATGTTTTTCCTAATAGCGAGC TCTAAATGACATTTTAGAGGGTCAAATAAAAAGATAAATAATATTTTTTCTGAAAATTAACAAAGTTAACAAGGTACATG TGTGTTTCTTTATAGGAACAAAGGTAAAATATCTTACAAGATTTGTTATGTGAAGTGGTGAATAAATCATGACCGTTGAA TTCAAGATTTAAACATTTAGTCATGTAATTTAAAAAAAAAAACATCATGACATTTTATGGTAGTGATGTAATTATCACAT GCCTATTAAATCATTTTAATTTTAATTATTCACGATGAAATCTAATTCTTAATAATTTATTTTTATGTTCTTATATAAAA TAATTATTCTCATAAGATACATTTCTGACCTTAATGTAATCACCCATTATGCACAATTAGATCCATTTCTTTAATTTAAA AATTAAGTTTATATTTAGTAGAATTAATTCTTATATTTTTATCCGTTTTTGCGTTCAGGAAAAACCGGGTGAAGAAGACC GTGAGAGTACCGGCGATTAGTTCAAAAACCGCCGATATACCGCCAGACGAGTACTCGTGGCGAAAGTACGGTCAGAAACC GATCAAGGGTTCACCGTATCCACGGTGAGTGTGTTTAACTACTGATCTGATTATGGCCGTTGGTTTGGTTGACTTTTGTA AAGGCATGTTCCCTGACGTTGATTTTATTTGAATCAGGGGTTATTATAAGTGCAGCACGGTGAGAGGGTGTCCGGCGAGG AAACACGTGGAACGTGCTACAGATGATCCAACGATGCTGATTGTGACGTACGAGGGGGAGCACAGGCACGCGCTTCAGGC CGCGATGCACGAGGACGCTTCTGGGGTTGTGGGTTTGGTTTTTTAGTCAACGTGAACGTAGATGGTGGAATACTATAATA TTGAAAAAAAAAGTGGGTGGTAATGGAGGTCTTTTTCAAAAGAAAAGGAATTTTTATTTTTTTATTGAAAGGATTTGAGT GGAAGGAAGGTATGGTGGGGGCTGCGTTGTAAATTTGTTTTATTTTATTATTTTTATAGAGAGGTTGAAGATTGGAATCT CAAGTTATTTATATATAATTGTTATATCTCCTTTGCAAAAGTCTTGATGATGATGATTATTATTAATTTTTTTGATTTCT CATTGGGAGGAGGTAGTATCCGATGCAGGGTTTATTTAATTGGTCGTCTATTTTAATGCTGATAATTAATAATTGAGGAA TTAGATACTCCAATTGATTATCTTATTTGTTTGGCTATCTTGACTTTGTTTAACACAAGAAATGAAATTTAATGGCATAT TAACACATGTCCACGTTTGAAAAAGATTCGTTTTGAGAAGTTTTTTTTAATTATATTTATAAGATGATGGTAAAGGATAG TTGTCTTCGATTTTTTTAGTGCTGTTCAATATGAGCCAAATTTGATTAATATTTTTAAGCACATTATGTCCATTTAAGTT AGTAGTGACTTAGTTCTAAAAAAAGTTAGTAGTGACTTTTACACTATTTATTCGCGTGTATTTTGGGAGGAAGAAAATAA AAAGGATGGATTATGAGTGTAAAATAACATCTTTGTGTGTTTGGATGTCAATGGGGAATGGGTTGACGTGGACAATAGGT GGAATACAATAATATTTCAGTTTTCCGTGCGGTCCTCCAAGGTAGGGGTGTCCAGCATGAACCGGACCGAACCGGACCCA GTCAAACCGAGTCATTTTTTGGCATTTCGGTCCGGTCGGGCTGGTTCACGGGTCCAACGAGTAACAAAACTCGGTTTTTA TAGGTTTGGTTCGGTCGGTTTCGGTTTGGGCTTGAGCCCGACCGAACCGACCGAAGTAGTTTTAATTATAAAAAAAAAAA AACTGGCCCAATCAACCCAGCCCACTCTCAAGTTCCCAACCCTCAACCCTAGATATAAAAGCTTCATTTCCCTAACCCTT GAAGACCCAGCAGCCGTCAAACATTTCTCCTTTCTTCCACCCACCTCTTCTCCACCACCACGAGCCACCACAACCACGAG CCACTACAACCTCTTCCCCACCCGAGCCAGCACCACCGCGAACCACCACCATCTCTTCCCTACCGCGAGCCACCACCACG CGCAGCCACCATCCACAATCCCTTCTCTTCCTCTCTGATGTCTTCCACCATGCTACACCACCATCACCAAATCCTCTTTG CAAGCTTCTCTCCTCATCTATATCTCACTCTCACCAGTCACCATTGCCATCGCACCTCAAAGCCACCACCGACGTCGCTC CTCTCTTCTCATGAAGCCATACTCGTCGCTTCTGCCAGCACCTTTTTCTAGAACCACCACCATCTGAGGGGATCCGTCGC TCCTGAAGCCAGATCTTTGAGTCATGAAGCTTGATTCGTCACTCTTAAACATGATCTGTTGTTGCATGTTTGTGACTTTC TTCTATTTTTTTTCTTCTGTAAAGACATGTAATGAATGTATAAATTTTTTCTTTGTTTTAATTTGACTGTATTGTTATGG AAATTACTTCCCTAATTACTTCCTTCTCAGTTTTTTTTTTAAATTTAATTCATCATCGTGT
CDS sequence (LotjaGi5g1v0066700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGTGGAACTCATGGGGTTCCCAAAACTGGATGAGCAAAAGGCCATTCAGGAGGCCGCATCAGAAGGCCTCAGGGG CATGGAACACCTGACCCGAACCCTCTCCCATCAACCCACCCACTTAAACACTCACCTCACCGACCTCACCGTTTCCAAGT TCAAGAAACTCATCTCCCTCCTCGACCGGACCGGCCACGCCCGGTTCAGACGAGCCCCGGTCCACCCACCACCGGTTCAC CACATCGCACCTTCTTCTACCTCCTCCTCTCTTCCTTCACTGCAACCGCTAACCCCGCCCGCTCACTTCGCCGCTCCGGC GCCGGTCTCCATCCGCCATGCGCCGGCGAGCTTCGTTCCGGCGCAATCGCAAAGCTTGACGCTTGATTTCACGAAGCCCA ACGAGGCCGTCCTGAGCAGCTCCTCCAACGCCAAGTCCGTCGAGCTCGAATTCTCGAAGGAAACCACGGCAGCCTTCAGC GTCTGCTCCACCTCCTCGTTTTTGTCCTCCGCTATCACCGGCGACGGCAGCGTCTCTAACGGCAAGCAAGGCTCCTCGAT CTTCCTTGCGTCGGCCACGCCTCAACCGGCTTCCTCCGGCGGGAAGCCGCCGCTGTCGTCGGCGCCGTTCAAGAAAAGAT GCCATGAACACCGTGAACACTCCGGTGACGTTTCTGGCAACAGCAAATGCCACTGCACCAAGAAACGGAAAAACCGGGTG AAGAAGACCGTGAGAGTACCGGCGATTAGTTCAAAAACCGCCGATATACCGCCAGACGAGTACTCGTGGCGAAAGTACGG TCAGAAACCGATCAAGGGTTCACCGTATCCACGGGGTTATTATAAGTGCAGCACGGTGAGAGGGTGTCCGGCGAGGAAAC ACGTGGAACGTGCTACAGATGATCCAACGATGCTGATTGTGACGTACGAGGGGGAGCACAGGCACGCGCTTCAGGCCGCG ATGCACGAGGACGCTTCTGGGGTTGTGGGTTTGGTTTTTTAG
Protein sequence (LotjaGi5g1v0066700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVELMGFPKLDEQKAIQEAASEGLRGMEHLTRTLSHQPTHLNTHLTDLTVSKFKKLISLLDRTGHARFRRAPVHPPPVH HIAPSSTSSSLPSLQPLTPPAHFAAPAPVSIRHAPASFVPAQSQSLTLDFTKPNEAVLSSSSNAKSVELEFSKETTAAFS VCSTSSFLSSAITGDGSVSNGKQGSSIFLASATPQPASSGGKPPLSSAPFKKRCHEHREHSGDVSGNSKCHCTKKRKNRV KKTVRVPAISSKTADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLIVTYEGEHRHALQAA MHEDASGVVGLVF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 326 | 319 | 3.1E-127 | – | |
| PANTHER | 8 | 326 | 319 | 3.1E-127 | – | |
| MobiDBLite | 73 | 93 | 21 | - | – | |
| MobiDBLite | 191 | 237 | 47 | - | – | |
| MobiDBLite | 209 | 225 | 17 | - | – | |
| Pfam | 211 | 255 | 45 | 1.3E-16 | ||
| Gene3D | 243 | 319 | 77 | 6.0E-30 | ||
| ProSiteProfiles | 252 | 318 | 67 | 31.112 | ||
| SUPERFAMILY | 253 | 317 | 65 | 1.02E-26 | ||
| SMART | 257 | 317 | 61 | 7.9E-37 | ||
| Pfam | 259 | 315 | 57 | 2.5E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi5g1v0066700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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