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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018872
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.178s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0162929.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 15-like [Glycine max] gi|356562255|ref|XP_003549387.1| chr0 76924420 76926847 -
2 domain predictions
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Lj0g3v0340829.1
n.a. PREDICTED: probable WRKY transcription factor 21-like [Glycine max] gi|356536719|ref|XP_003536883.1| chr0 178510395 178513609 +
2 domain predictions
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Lj1g3v1969400.1
n.a. WRKY50 [Glycine max] gi|151934217|gb|ABS18446.1| chr1 23354936 23356585 -
2 domain predictions
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Lj4g3v0819990.1
n.a. PREDICTED: probable WRKY transcription factor 15-like [Glycine max] gi|356496927|ref|XP_003517316.1| chr4 12773349 12775043 -
2 domain predictions
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Lj4g3v2140040.1
n.a. PREDICTED: probable WRKY transcription factor 11-like [Cicer arietinum] gi|502150356|ref|XP_004507914.1| chr4 29583961 29585282 +
2 domain predictions
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Lj5g3v0587880.1
n.a. PREDICTED: probable WRKY transcription factor 17-like [Cicer arietinum] gi|502124529|ref|XP_004498566.1| chr5 6962918 6965582 -
2 domain predictions
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Lj5g3v1015850.1
n.a. PREDICTED: probable WRKY transcription factor 21-like [Glycine max] gi|356536719|ref|XP_003536883.1| chr5 16911481 16914456 +
2 domain predictions
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LotjaGi1g1v0395200.1
n.a. WRKY family transcription factor; TAIR: AT4G31550.1 WRKY DNA-binding protein 11; Swiss-Prot: sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11; TrEMBL-Plants: tr|A7LHI7|A7LHI7_SOYBN WRKY50; Found in the gene: LotjaGi1g1v0395200 LjG1.1_chr1 88107428 88110254 -
2 domain predictions
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LotjaGi1g1v0712900.1
n.a. WRKY transcription factor; TAIR: AT2G30590.1 WRKY DNA-binding protein 21; Swiss-Prot: sp|O04336|WRK21_ARATH Probable WRKY transcription factor 21; TrEMBL-Plants: tr|A0A0R0KWS7|A0A0R0KWS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0712900 LjG1.1_chr1 128077503 128080365 -
2 domain predictions
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LotjaGi4g1v0101500.1
n.a. WRKY family transcription factor; TAIR: AT2G23320.1 WRKY DNA-binding protein 15; Swiss-Prot: sp|O22176|WRK15_ARATH Probable WRKY transcription factor 15; TrEMBL-Plants: tr|I3T1D3|I3T1D3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0101500 LjG1.1_chr4 13909261 13912426 +
2 domain predictions
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LotjaGi4g1v0307700.1
n.a. WRKY family transcription factor; TAIR: AT4G31550.1 WRKY DNA-binding protein 11; Swiss-Prot: sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11; TrEMBL-Plants: tr|I1LVK7|I1LVK7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0307700 LjG1.1_chr4 68367642 68369792 +
2 domain predictions
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LotjaGi5g1v0029900.1
n.a. WRKY transcription factor, putative; TAIR: AT4G24240.1 WRKY DNA-binding protein 7; Swiss-Prot: sp|Q9STX0|WRKY7_ARATH Probable WRKY transcription factor 7; TrEMBL-Plants: tr|A0A0B2QM44|A0A0B2QM44_GLYSO Putative WRKY transcription factor 7; Found in the gene: LotjaGi5g1v0029900 LjG1.1_chr5 4882092 4885685 -
2 domain predictions
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LotjaGi5g1v0066700.1
n.a. WRKY family transcription factor; TAIR: AT4G31550.1 WRKY DNA-binding protein 11; Swiss-Prot: sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11; TrEMBL-Plants: tr|A0A072VCI7|A0A072VCI7_MEDTR WRKY family transcription factor; Found in the gene: LotjaGi5g1v0066700 LjG1.1_chr5 11065651 11070111 -
2 domain predictions
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LotjaGi5g1v0176000.1
n.a. WRKY transcription factor; TAIR: AT2G30590.1 WRKY DNA-binding protein 21; Swiss-Prot: sp|O04336|WRK21_ARATH Probable WRKY transcription factor 21; TrEMBL-Plants: tr|A0A0R0KWS7|A0A0R0KWS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0176000 LjG1.1_chr5 44936425 44940787 +
2 domain predictions
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LotjaGi5g1v0176000.2
n.a. WRKY transcription factor; TAIR: AT2G30590.1 WRKY DNA-binding protein 21; Swiss-Prot: sp|O04336|WRK21_ARATH Probable WRKY transcription factor 21; TrEMBL-Plants: tr|A0A0R0KWS7|A0A0R0KWS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0176000 LjG1.1_chr5 44937462 44940536 +
2 domain predictions
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LotjaGi6g1v0233400.1
n.a. WRKY family transcription factor; TAIR: AT4G31550.1 WRKY DNA-binding protein 11; Swiss-Prot: sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11; TrEMBL-Plants: tr|A0A1J7HD76|A0A1J7HD76_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0233400 LjG1.1_chr6 54250802 54253690 -
2 domain predictions
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