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LotjaGi5g1v0072200.2

Overview

Field Value
Gene ID LotjaGi5g1v0072200
Transcript ID LotjaGi5g1v0072200.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT3G12620.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LHJ9|P2C38_ARATH Probable protein phosphatase 2C 38; TrEMBL-Plants: tr|A0A151R4Z0|A0A151R4Z0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0072200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:11947680..11952041) extracted from Lotus japonicus Gifu genome v1.2.

ATAGTTATTACCGTGTTGAATCACGATATCCCCGTTTTTAGGCTCACTTGACCTCCAACACGTAGTTGCCTAGAAACTAA CTAAGGATCATAGTTCAAAAAGATGATTGGGACTCAAAATCTCAACCATGAAATTGAAGGCTTTTAAGAAACCCACTTGG TCACAATTCACAAAAGCATTTAATCCTAAGGGACAAATAAAAGGACAAGTGCAACAATGTCAGACTATGTTGTTTAAATC TCTTCATTTGATCCTGATCTTAGATCTTGTCTCACATAAAGCTCCAATCCTTCTCTTATCCATTGCTTCCTTTGGTCACT GAGATAATAGACCAATTCTGTCATATTGAATCTATATGTGCTTTCACAGCTAACTTTGTTCCTGAAACATGGCACAGCAC TGAAGTCCAACTCAGATTCAAGGTACACAGTACCAGCACGTCTCCATATTCTCTGAACTTGCATGAAAACTATACTGTTT CACTTTCCAAGGTACACTTCTCAGTTAGTTCAGCCCATACCCTTCTGTTCTTTATCTCAAATTTGTTCGTCTTTTGATTA ATTACATTTCCACCTATTTTGTCTTCACTAATCATATCTCTATGCATTTCCAATCACATCATTTATCATATCGTCATTTC TCGATCTTCCTATGTCTCTATGAGTGTAGATGAAATTGAGGTGTGAATGAAGTACCTATTTGGATATATGGTGGAAAACC AGGTGAGGTAAAATCGAAGTGGACATAAGCAGCTTCTCTAAAGCTTTTGGACTTGTTCACCGTGATTTTGACTTCAATGT GATTTTTCACCATGTATTCAAACATGCACAAAGTATTATTGAATTTGTTCTTATCCAATGATGTCTGCTTCTTCTGCAGG GTATATATAAACTCAAGATCTATTGGAAGCAAAACCAAGAAGAAATTGATCTTATTTACTTCAACTATTTCCATCCTTTA GGATATTGATGTGAAAACATAAGCTTTTATAAAATTATTACCAAAAGATGGTTAGATCCTGTTGGAAACCTTCTGTAGAT GGTGATGATGGAGATCATGGAAGTGGAAGTGAGAGTGGGAGAGTTGATGGCTTGCTATGGTACAAGGATTTGGGGAATCA TCTTTATGGGGAATTCTCAATGGCTGTGGTTCAAGCCAATAGTTCCTTGGAGGATAGAAGTGAACTTGAGTCTGGTCCCT TGAGTTCCAACCATTTTGGTCCTCAAGGGACCTTTATAGGTGTATATGATGGCCATGGTGGGGCTGAGGCTTCACAATTT GTTAGTGATAATCTTTTCTTCAACCTCAAAAGTATGCCCTCATCTTTATTATACGCATATAGATTCATAGCATGTTTGGA TCAGTTTCTCTTTCACTAGCATCAATTCCGAAACTCGGAAACTATTCACAGAAGCTTCATCCCATAATTGATTCTGGTTT CAGAATCAATTGTAGAAGATTTCAAACATGAGCTCAAATTCATTCAGTGTTATTTTCCTACAAGTTGCTAGATGCAGATT TCAAATGAATTGGAGACCGTGGAAGCCCTGGCACTTGCATCTTCTTCTATGACCCTGACTCTTTTTTTTCTATGAACATG TACTTCAAACTCTCCAAAATGTCTGCATTCTTAAAAACATTCTCTGTCCAAAAATGGCCTACTATGTATATCTGACTAGT GATGATACTTAGAAATCCAAACAGTTAAACACCTCCTAGACATTCTATTTTTATTTTTATCTCTCTTTTCTTATCATATC ATGTCGCATCCATTACTTCTCATTTTGGTTTTCTATACTATGCGAATGTTCATTAATCATTTTCCATATGGACACTCCAC AGTTGTTGGAGCCTCATGCACTGGCCACCCTTTATTTTCTAGTTGTTACTTACTGAATCCTTTTTTGTTCGTGTGATCCA GGGCTCGCAGGTGAACACCAAGGCATTTCAGAAAAAGTGATCAGCAAAGCATTTTCAGCAACAGAGGCAGGTTTTCTATC TCTTGTGAAGAAACAGTGGCTAAGTAAGCCACATATAGCATCCACTGGTACTTGTTGTCTTGTGGGGATAATTTGCAATG GCATGCTTTATGTTGCAAATTCTGGTGACTCTAGGGTTGTGTTAGGAAGAGTAGAGAGGGCAACAAGGGAAACATCAGCT GTGCAGTTATCTACAGAACATAATGTTAACCAAGAAACAATAAGAGATGAACTTCAGTCAAAGCACCCCTATGATCCACA AATCGTGGTTATGAGACACAATGTTTGGCGTGTGAAAGGCCTCATACAGGTAGAAATTTGATAGATCAAAATTGCATTTT GTTATTGAAGAAGAATTTTACAAATTCCTTTCAGTAAACAAAGAGAAGACTAATCCAAAGTACTAGCATGTTTGGATCGG CTTCTCTTTCCTCAGAATCACTTTTGACACACAAAAGCTTCTTATGCACTAAAACAGTTTGCTTGATATTATTTATAAAG ACTAAAAGTGGTGCCTGCCACTCAAATGCATGATAGCTTATGCTAGACATTGAAGTCCATAAGCAAGAACAAATAAATTT TACTTCTTCTAACAACTTATAAGCGCATGTTTGGAAATTCTTCTATCATTGATTCTAGAAGCAAAAACAAATCTAAAGAT AAACTTCTACCTTCTAGTTTTAGAAGAGATTCTAAAGAAACAGAAGTTTATCCAAATATGCTATAAGTCATACATTTCTT GGAGAAGATCTTAAACATTTATAGCCAAAATTTATTAATAGAACTTGGCTTTGCAGGTTTCAAGGTCCATAGGTGATGCA TATTTGAAGAAAGCAGAATTCAACAGGGAGCCTCTACCATCAAAGTATAGACTAGCTGAAACATTCTTCAAGCCGATACT TAGTAGTGAGCCATCAATATCGTCACACAAACTCCATCCCGATGATCAATTTCTCATATTTGCATCTGATGGCTTATGGG AGCATCTCAGCAACCAAGAGGCTGTTAACATAGTCACCAACAACTCACCTAATGTATGCTTCCTTCCTTTCTGTCCATTC AAGGTTGTTGTTTTTCTCTTTAGTAGTAAAAGTCCTGAAATTTGGATTCCCCGCACTCGGATAGTTCCTACATTCATGCA ATCTAAGAATCTGAGTCAGTTGATTAAAGATCGGACCGCTAAAATTTTATTTATATCTCTGCCGCCCATATTAATAAAAT ATATGAGCTGACCGATCTTGATCCAACAACTGAGATTCATTGGCAGTGTGAATGTAGGATTGCCCTAATTGCAGGGAACC CAAATCCGAGTCATGTCTGAATGAATAGTGGTATGCATTTCATGTAATGTAACAGGGAATTGCCAGAAGACTTGTGAAAG CTGCGCTTCGAGAAGCAGCTAGGAAGAGAGAAATGAGATTTGCAGATCTCCAAAAGATTGAACAAGGAGTGAGGAGACAC TTCCATGATGACATAACGGTGATTGTTGTGTTTCTAAATCACAAATTTACGGATCATAGCTCTCTCTGGGGTTCTCCACT TTCAATCAAGGGAGGTGGGTCTGCCAATTACTAGATTGGTGCTGCTGATCATCCAAAAATAGCAACTACTTATAAAGGTA GACTAAAATGAAACAAGTTTTAGATCATGACCATGATCTCCCTCCTCTGTTCTGTCCATATATATAGATGTAATCATGTA ATTATTGTTCATGTTTCTTAAGACAAGAATCTTTGGCCCCAGGTCATAGTTCAAAGTCAGCATTGCTGCTAAGCACGTCC TAGAAAATGCAAAGCTCTGTCTGTCTATGACGTCCATTATTTCCTTAACCATAATTCTTTGCTGTATTAAGTTATTACCA TGACTACCAAAAAAAAATAGCAAAACTGCAAAAGCGTAGAAAGGTAGCTATGTAGAAATGCCCCATTCAGTTTTCAGAGG GAAACAAAAATCACATCTATTAATCTTCACACTTATATTGTCTTTGATTAATCCGTTATTAATCAATGTGAGACTTATTG CTCACCCTTAAAATTTCCAACATTCTCCCACCCAAATGTGAGTTCAGACTCTCAACATCATACTCCCCCTAAAACGAAAG CCTTACTGAGTAGTGCGAAGCCATCAACTACCGCCGAACTAAATACTCGGCCCAATAGAACCAAGCTTTGATACCAATTG CTGAATTTAATAAGAACTAACAAGATCAAACAGATCATATTCATGTAGATACAGAGTATAACATGTTATAATTTCAACAA GGTAAAGGAATTGTGCACCTGGTATGACCGTATGAGAGATCCATTGTTGTCTTCTCTGATTCTCTATGGAAGCATGAACG TGAGAGTAGAACTACTCTCATTCTGACAAGTATTGATTATTT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0072200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTAGATCCTGTTGGAAACCTTCTGTAGATGGTGATGATGGAGATCATGGAAGTGGAAGTGAGAGTGGGAGAGTTGA TGGCTTGCTATGGTACAAGGATTTGGGGAATCATCTTTATGGGGAATTCTCAATGGCTGTGGTTCAAGCCAATAGTTCCT TGGAGGATAGAAGTGAACTTGAGTCTGGTCCCTTGAGTTCCAACCATTTTGGTCCTCAAGGGACCTTTATAGGTGTATAT GATGGCCATGGTGGGGCTGAGGCTTCACAATTTGTTAGTGATAATCTTTTCTTCAACCTCAAAAGGCTCGCAGGTGAACA CCAAGGCATTTCAGAAAAAGTGATCAGCAAAGCATTTTCAGCAACAGAGGCAGGTTTTCTATCTCTTGTGAAGAAACAGT GGCTAAGTAAGCCACATATAGCATCCACTGGTACTTGTTGTCTTGTGGGGATAATTTGCAATGGCATGCTTTATGTTGCA AATTCTGGTGACTCTAGGGTTGTGTTAGGAAGAGTAGAGAGGGCAACAAGGGAAACATCAGCTGTGCAGTTATCTACAGA ACATAATGTTAACCAAGAAACAATAAGAGATGAACTTCAGTCAAAGCACCCCTATGATCCACAAATCGTGGTTATGAGAC ACAATGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCAAGGTCCATAGGTGATGCATATTTGAAGAAAGCAGAATTCAAC AGGGAGCCTCTACCATCAAAGTATAGACTAGCTGAAACATTCTTCAAGCCGATACTTAGTAGTGAGCCATCAATATCGTC ACACAAACTCCATCCCGATGATCAATTTCTCATATTTGCATCTGATGGCTTATGGGAGCATCTCAGCAACCAAGAGGCTG TTAACATAGTCACCAACAACTCACCTAATGGAATTGCCAGAAGACTTGTGAAAGCTGCGCTTCGAGAAGCAGCTAGGAAG AGAGAAATGAGATTTGCAGATCTCCAAAAGATTGAACAAGGAGTGAGGAGACACTTCCATGATGACATAACGGTGATTGT TGTGTTTCTAAATCACAAATTTACGGATCATAGCTCTCTCTGGGGTTCTCCACTTTCAATCAAGGGAGGTGGGTCTGCCA ATTACTAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0072200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVRSCWKPSVDGDDGDHGSGSESGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRSELESGPLSSNHFGPQGTFIGVY DGHGGAEASQFVSDNLFFNLKRLAGEHQGISEKVISKAFSATEAGFLSLVKKQWLSKPHIASTGTCCLVGIICNGMLYVA NSGDSRVVLGRVERATRETSAVQLSTEHNVNQETIRDELQSKHPYDPQIVVMRHNVWRVKGLIQVSRSIGDAYLKKAEFN REPLPSKYRLAETFFKPILSSEPSISSHKLHPDDQFLIFASDGLWEHLSNQEAVNIVTNNSPNGIARRLVKAALREAARK REMRFADLQKIEQGVRRHFHDDITVIVVFLNHKFTDHSSLWGSPLSIKGGGSANY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 21 21 - –
PANTHER
PTHR13832:SF714
19 371 353 2.3E-175 –
PANTHER
PTHR13832
19 371 353 2.3E-175
IPR015655
Gene3D
G3DSA:3.60.40.10
33 359 327 8.7E-83
IPR036457
SMART
SM00332
36 348 313 4.2E-70
IPR001932
ProSiteProfiles
PS51746
39 350 312 42.917
IPR001932
CDD
cd00143
40 350 311 1.12027E-67
IPR001932
SUPERFAMILY
SSF81606
53 351 299 5.1E-59
IPR036457
Pfam
PF00481
71 319 249 2.4E-39
IPR001932
ProSitePatterns
PS01032
76 84 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0072200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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