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LotjaGi5g1v0075400.1

Overview

Field Value
Gene ID LotjaGi5g1v0075400
Transcript ID LotjaGi5g1v0075400.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Dehydrodolichyl diphosphate synthase complex subunit NUS1; TAIR: AT1G11755.1 Undecaprenyl pyrophosphate synthetase family protein; Swiss-Prot: sp|Q96E22|NGBR_HUMAN Dehydrodolichyl diphosphate synthase complex subunit NUS1; TrEMBL-Plants: tr|A0A0B2RPB0|A0A0B2RPB0_GLYSO Nogo-B receptor; Found in the gene: LotjaGi5g1v0075400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:12461759..12468071) extracted from Lotus japonicus Gifu genome v1.2.

AAAAGAGATATGAAGAGAAAAAAAAAGTAAATAGAGAAAATATGAGATGTGATATATAATAAGATGAGAAAACCCTTGTG GTATCAACGATGCTCCAACTATCAATTCTTGAGCGACATGAACTTTGAGGGACCAAATTGGTGATTTAGTGTTTCAAAAC AAAACCCTTGTGCTATCAACGATCCTCCAACTATCAAGATCGGTAGCCTCTAACTTGAAACATTTCCGTCAACGACAGCG GGACCATCAAGGCGCACGACGCGGTGCTTGATCGGAGATGCAACGGTGTGGGGGACTGGCCATTGCATAATCGAAAAACA GGTAAGGGAACCACTTTTTCCTTCTGGGTTCTGCTCAATTTTTCATACTAGCAAGCATTCTCCATGCGTGTTCGATCTTT CTTATTTATTTGCTAGTTGTTTTCTCTTTTGGGCAAGTAGGAAAAGTAACACCAATGTGGTAGCTTCTTCTTTCGAAAAA TTTGATGTTTTTCTTACTTATAGGATGGTGGATTTTAGAGATGGAGCTCACAAGTTTTCTCATTGTCTTGTTGCTGTAAG TGTTCAATTTTTTTATACCCTTGAATTGCATTTTTCATTATTGAGATTCACAGTATTTCTTTGCAAGATAATAGGAGATT TTGTGATGTTTTTATCTTCTTCAAACATCTTACTGTCATGGACACAGCTTATTTTTTTATTTTTTATTTTTTTGATAGGC AAATGTTAGTTGTTAGCAAATTAGTCCTCCTCAGGGTTTGAACCCTGGACCCTTCACCCTTTACCCTCCCAAGCCCTTAT GTCCCCTAGCTCTTACCACTTGAGCTAATCTTCGGGGACATGGATTGGTTTCATAGGCTCCAAGTGCGCTAATCTGAGCA TTCTAGTTGTGCACACATAATTAAACCGAAGCAAGAGTACTAAAACAAGAAAGAAAAACTAACTACACTGAAATTTAACT GATTTGTTGTCCGTACCGAATCTTAAAATGGTAATCTACACATGTGTCCTAAACTGATAATGATAAATCACTAAATGTTC ATATTCTTAAAGAAAATAAAATATGCTTATGACTTATTTCAATATAACTTGAATATGTAATGTTCAAATATTTATATTAT TGTTGCTCCATGGTTTGTCTGTTTATTGTTGAACGCGGCGACATTTAACATGAATGGTTAGTCTATACTCTATACAAGGT AGTGAGTTTTAATGCTTGTGCAGATTGGAAATCTCGGGCTTCGGCTAATATGGTACTTTCTGCAAGTAATTGTCAGCACA TGGTATTTCGTATCAGCCATGGTTAGTTTGTTTGAAAGCTATTTCATCTCTTATGGAGTATTGAAGAAATACAAGTCTGT TCATATAGGAAAACTTGGGTCTCTTGCCATTGTCATAGAAAGTGAAGATGCTCATCAGACGTCAAAAGTTGTTAAACTTC TGCAGTGGCTGGACTCTATCGGTGTAAAATATGTGTGCCTCTATGACATGAATGGTACGAAAGGGTTGGAGAATCAGTGA TAGTAAACTTTCTTTTATTTAGGCCAGATGATAATGATTTCCTTGAATGCTATATTATAGGAGTGTTGAAGAAGTCCAAG GAAGCCATATTTCAAAAATTGAAGAATGCAAAATCCATAGAGGTACCATATATTTATTTTTCCCACGGCATATTGCTTCT TTCTTAATATATTAATGAATTTCCCTCCTCGTGCATGATATTAACCTACATTTGACCAAGCAGTTCATCTTATATGTTTG CCCATATGTTGCTGATAAAAAACAATGTTTGCCCATATTAATCTCATAGTTTGGGTATTCTCACACGCACCTCATTTTGT TTTGTCTGATTATTTTCCTGTGCATATATGGGGGTGGTGGAGGATATAAAAAACATTTATTTGGACAATGGGAGATGATG TGTCCAAGATTGAGTTAAATCAGTTTTACACCTGAAATTTGTTGAATGAGTGTTGTTTCGTTTCCAATTTCCCTCTTGTC TTAAAAGGTTCATAACTGATGGGACCTACCTATAGTATTTGTGGATGTACCATATAAGAAAATCATTGAGGAGATGAAAT ACATGTTTCTGACTTTCTGTTGATATATTATATAAGCAACATGCCTCGCATTTTAACTCTAGACTTGTTATGATTTGGTA AGATGAGCGGAGAGAAAAACAAAGGAAAGAAAATGAGGCTAGAAAGTAATTTATATTTAGGTATTTGGATGGTAAGTTGA CAATAGGATTACGAAAAAATTGGCACGAAAAAGTGCCTTTGAATCTACAAGAAAGTTCCATGTAAAGATGACGTGAAAAA GGAGAGAACTACTCTGTAGTACAGCAGTCCTCCTCTTCCTCCTTCTTCTTATGTTAGTATACTCTATGTATTCTCATTTA GTTTCCATATCAAGCCTCAATATAACTTCTGTTTTCTCACTTGTTTGATCTGATCTACCTTTAACCCAGTGCAGGGAGTT AATGAAGCTGTCACGCACCATGTTCCGGATCACATGACATTGGAATTTATTTCTTATGTGGATGGGAAGGAGGCAGTGGC CAAGGCAGCTAACTTGACTTTTGAGGAGAATTTGAAACGACATAATTTGGGTGGAGAACTCGATGGTCAAATCTTGTTAG AGCAGCAACTGAATGAAGCATTGCAAATAGTTGGTATTTTTGCTTCCAAAACCTAAAATAATTCAAAGAGTTGATTTTCT GGTGCAATATAGCTCTTACCCAAATAACAACAATTTTGTTTTACTGTCAGGTGGCAAAGGCCCAGAACCTGACCTTTTAC TGGTTTATGGACCTGTGAGGAGCCATCTTGGTTTTCCTGCATGGAGAATTCGGTATACAGAGATTGTGTATGTTCTTTCA AGTAAATCATCAGTGCAATAAAAAAATTAGCTTGTTTGTTTTCATGAAGTGCAACAATGCTTGTGCTTAGATGCTAAAAG AACCAGTGACTGTTACATGGGTTTTCTGTTCTGCATTAGGCTTATGAACTTGGATTAGTTTTTTATTTAAAAAAACCTTG GATTGGTACACTTAACAATAAGCTGAAATAGAAGTCCATGTTAATGAAAGTAGAGTCATCTTGAGTGTCAGTGAATACTG AATATCATTTGATCTGATTTAGTTTCTCTCTATCTCTCTCCCTTCTTCTTTTTTATGTTTTCTTTCTTGGGTAAAAAAAC CTTGGATTGGTACACTTAACAATAAGCTGAAATAGAAGTCATCTTCGGGTGTCAGTGAGTACTGAATATCATTTGATCTG ATTTAGTTTCTCTTTATTTCTCTCCCTTCTTTTTTTTATGTTTTCTTTCCTGGGTATTAAATCTGTGGCAGAGTTGCTAT TCCACTATTCCACAGTTTTGTGCTGAAGCTTTAAACCTTAAAAATGAACTTACATGCATTGCATTGGTTGTCTGTTATGT GAGTGTAAGAAGTTCCATTCTTTACATAGCTTCTTTTTTCTATTTTTTCTTTGATTAGATTCTGACTGATGTTTATTTCA GGCATATGGGATCATTGAATTCAATGAGATACGGTTCCTTAATAAAAGTTATTCACAACTACACGAAAGTGCACCAAAAT TATGGTAAGTACTCTCTTTACTGAGAGTTGCTTACTGCTCTGCCATGGCTTGTTCGACCCCATATAAATTTTATAGTTAT TTTTATTGTTGATTGCATTTTGCTTCTTCTGTCTGTGTTAGTTTGCTAAATATGTGTCAGATAATGAAACCTCTCCACAC ATGATAATGAAAACAAATTATACAAGTGATTCTAAAGTGTATCAATGTTGGGGCAAGCTTATGTGTGTAACTTTTGGGTG ACAATTAATTCTGAGGAAAAATAAGATGATTAATCCTGCTTTTAGTGTTATGTTATCACGTTACATATTCTATATGCAAT TGCAATCTGTTTTCATTGTGTTTATTTTGGGATTGCTAACAGGTACATAGGGGAGAAATTTGAAGGTATTGACTGGGCAA GTACATACATAGGCGGCGGGAAGGGTTAAAAAATATCTAGCTAAATATCTTTGTGGAGGAAGAGCTTTCTCACTAGTTAT GTTTAGATATGTCATGATGAGATATAGCATTGCAAGTCATGATTTAGTATCACTCATAATTGATTTTTTAGTATGATTCT TATACAGTGTTGTCAAATCGCGATCGCGGAAAATCGCGGCGAGGCCAAAATCCGCTATTTCATTTAGCGGATAGCGTCGC GGGCAAATAGCGGTAACCGCATAGCGGTTAAAATAAGTAAAATATTATACAAAAATAGCTTGTCACAAAAGAAGAACGAA ATAAAATACAGAGACAGAATAAAAAGCAGAAAACAGAGGGTGAATAAATGAAAAACAGAAACCGGAACTGTGGAGAAAAA ACGAAGTGAAAGAGATAAGGAAAGAGAGCAGAGTGAAAAAAAAAAACAGATAATTGTGAATAACGAACAAGTGAAAAGAG AAAGAGAAAGAAAATGTGAAAGAGATAAGGAAAGAAAGCAGAGTGAAAAAACATAAAAACAGATTCTGAATTCTGAAAGT TTGAATTGTGAATAGCGAACAAATGAAAAAAGAAAAAGAAAGAAAACAGTCTGGAAATTTGAAGAAAGAAGGAAGGAAAA AAGAAAAGGAAAGAAAAGAAAATAGAGTGTGAAAAAAAGAAGTGGCATTACATTCTCCAAGCGGTGCCATTTTAGAAAAA TCAGTTGGTGGCATCATTCTCCAAGCGGTGCCATTTTCTTCCACTAATTGGCATCCAATTAAATCAGTCGGTGGTATTAC ATTCTCCAAGCGGTGCCATTATTGAAAATTCCCTCAAATCACGCATGAAATTAACTCCCACCCGATATTTCCGCTTTGCC CATCGCGGCGTTATTGCGAGTTGCGCCGCAATCGCGTTTGTCGCGGTGGCCGCGATGTCGCGGCGTAGCGATTGCGGCGG GCCAAATTTCCGCTACGCTATAGCGGGTCGCGGCCGCTATAGCCGCTATTTGACAACACTGTTCTTATAGCGGTATCAAA TTTTGCGAGTGATACTAAATAGTAAATACTAAATAGTGAGACAAATTTTTCACTTTTACAATAATACTTACCTCTTATCC CTCCCTCTCCTTCTCCTTCTCATAAGAGTGACAGAGTGTTATTATATCAATTTTTTGTCATTTTTTTCATCAAATCGACA AGTGAAGATTTTTTTCGCATTTCTACTTGTTTTCTTTATATGTAATAACAAATAAAATCTAGGCTTAATTCCAGTTTGGG TCCCTGATGTTTCGCAAATGTGCGGTTTGCATCCCCTGTGTTTAAAATGTGTGGTCAACATCCCGCATGATTCCAAAACG ATCTATTGAGACCCTTCCGTTAAGTTCCGTCAGTTGACTAAACGGAACCACGCCTTTCTCTTCTTCTTCCCACGCACCAC CGGGATCCACCTAGCCAAAACCACCGCACCACCACCACAACCTACCTGACCAATTTCAGAATCCATAACAAAGTTCCAGA ACCAGAGAATCAGAAGGGGAGAACAATTTCAGAACCCATAACAAATTTTCAGAAGCTGGTGATTTCTTAGTAGATATTTG GTATGATAAAGAAGACATCTTTGACTAAATTGTTGAAACTCCTAGTTAATGGCAACTGAAACAAGGAGCTGTGTAAAGCC TTTAACCTGCATTGACCTCCATTTCTCTTGTAGGTGTCCACTTACATATCAATATCACAGCAGAGGGAGACTTTGATCTC CACATTAACCTCCTAGCATGAAATTTTTCTTTATGTACTAATATTCTGATAAATTTCACGATTAGTAGGTTATTATTTTC CACCATTTATTTAGTGGTGGCAAATTTGATTATTTGAAAAGATAAAAATATATGTATCTATTTGTATCTGCTTATCCATC AGCAAACATTTAAGATCTCATTCATGGGTGAAATAGTGGATACTTCTTAACATTTCTAGAATTGGAAACTTGCCACCAAA AAAAAATTCAGAAGCTGGTTCAACGAAAAAGGGGAAACGGTTTTATGAAGAAATCCCCAAAATCAGAAGGGGATTAATTT TCAGAACCCAAAAGCAATTTTTCAGAAGCAATTTTCTTTAACGAAAAAGGGGAAATGGTTTTGAGAGAAATACCCAGAAT CAGAAGGTGAAGAATCCAAAATTGAGAGAAACTTAGTTGAAACATTCTAGATCGAGAATAGTCATGGAACACTTCTGTGA CACAGCGAGGGAAAATGCGTTCTGGGTTTCTCTCACACCTTTCCTCCTTCATCTCTGGGTTGTTGTGTTTACT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0075400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGGATTTTAGAGATGGAGCTCACAAGTTTTCTCATTGTCTTGTTGCTATTGGAAATCTCGGGCTTCGGCTAATATG GTACTTTCTGCAAGTAATTGTCAGCACATGGTATTTCGTATCAGCCATGGTTAGTTTGTTTGAAAGCTATTTCATCTCTT ATGGAGTATTGAAGAAATACAAGTCTGTTCATATAGGAAAACTTGGGTCTCTTGCCATTGTCATAGAAAGTGAAGATGCT CATCAGACGTCAAAAGTTGTTAAACTTCTGCAGTGGCTGGACTCTATCGGTGTAAAATATGTGTGCCTCTATGACATGAA TGGAGTGTTGAAGAAGTCCAAGGAAGCCATATTTCAAAAATTGAAGAATGCAAAATCCATAGAGGGAGTTAATGAAGCTG TCACGCACCATGTTCCGGATCACATGACATTGGAATTTATTTCTTATGTGGATGGGAAGGAGGCAGTGGCCAAGGCAGCT AACTTGACTTTTGAGGAGAATTTGAAACGACATAATTTGGGTGGAGAACTCGATGGTCAAATCTTGTTAGAGCAGCAACT GAATGAAGCATTGCAAATAGTTGGTGGCAAAGGCCCAGAACCTGACCTTTTACTGGTTTATGGACCTGTGAGGAGCCATC TTGGTTTTCCTGCATGGAGAATTCGGTATACAGAGATTGTGCATATGGGATCATTGAATTCAATGAGATACGGTTCCTTA ATAAAAGTTATTCACAACTACACGAAAGTGCACCAAAATTATGGTAAGTACTCTCTTTACTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0075400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVDFRDGAHKFSHCLVAIGNLGLRLIWYFLQVIVSTWYFVSAMVSLFESYFISYGVLKKYKSVHIGKLGSLAIVIESEDA HQTSKVVKLLQWLDSIGVKYVCLYDMNGVLKKSKEAIFQKLKNAKSIEGVNEAVTHHVPDHMTLEFISYVDGKEAVAKAA NLTFEENLKRHNLGGELDGQILLEQQLNEALQIVGGKGPEPDLLLVYGPVRSHLGFPAWRIRYTEIVHMGSLNSMRYGSL IKVIHNYTKVHQNYGKYSLY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 11 11 - –
Phobius
TRANSMEMBRANE
12 30 19 - –
PANTHER
PTHR21528
16 256 241 1.8E-75
IPR038887
TMHMM
TMhelix
25 47 23 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
31 35 5 - –
Phobius
TRANSMEMBRANE
36 57 22 - –
Phobius
CYTOPLASMIC_DOMAIN
58 260 203 - –
SUPERFAMILY
SSF64005
80 248 169 5.49E-19
IPR036424
Gene3D
G3DSA:3.40.1180.10
110 258 149 2.8E-9
IPR036424

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016765
Molecular function Transferase activity, transferring alkyl or aryl (other than methyl) groups Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).
Subterm of
GO:0019408
Biological process Dolichol biosynthetic process The chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.
Subterm of
GO:1904423
Cellular component Dehydrodolichyl diphosphate synthase complex A protein complex which is capable of dehydrodolichyl diphosphate synthase activity.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0075400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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