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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0075900 |
| Transcript ID | LotjaGi5g1v0075900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipid phosphate phosphatase 1; TAIR: AT5G03080.1 Phosphatidic acid phosphatase (PAP2) family protein; Swiss-Prot: sp|Q6NLA5|LPPG_ARATH Lipid phosphate phosphatase gamma, chloroplastic; TrEMBL-Plants: tr|A0A151T2M4|A0A151T2M4_CAJCA Dolichyldiphosphatase 1; Found in the gene: LotjaGi5g1v0075900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:12508896..12513237) extracted from Lotus japonicus Gifu genome v1.2.
TGTCGTGAAATTATTATTTTTCACCCTTTCAAAAAAAATATATTATTTTTCACTCTAAGTTATTCATATATCTTGACCTT TTACACTGTAACTTCAATTCCAGATATTCATTTCATTCATACATCACAATTCACAACGACCACTCTTGATTATTAACGTT CCTGTTTCAACGATCACCAACATCACATCACCGTCGAGCTCAGATCTGATCTCTCCGACCACCGCGATGTCCACGGCGGC GCTGAAGGCCGTAACACTAACCCACGTCCGATACCAACGCGGCGACCGCATCGGCCACTTCCTCGCCTGGGTATCCCTCG TCCCAGTCTTCATCAGCCTCGGCGGTTTCTTCTGCCACTTCATGTTCCGCCGCGAGCTCCAAGGCATCTTCTTCGCCGTC GGCCTCGTCATCTCGCAGTTCATCAACGAGCTCGTCAAAACCACCGTGCAACAAGCCCGCCCTGAAACCTGCGCCATCCT CGAAATCTGCGATTCCCATGGCTGGCCCTCGAGTCACTGCCAGTACATGTTCTTCTTCGCCACCTACCTCACCCTCGTCT ACGCCTCCAAAGGGTTCACCGTTTTCCAGAACAATCTCATCGTTCACCTCGCTACCTGGTCGCTCGCGTTTCTCACTGTG TTCTCGAGGGTTTATCTGGGTTACCACACGCTTGCTCAGGTTTTCGCTGGTACCATTTTGGGGGTTTCTCTTGGTGCGAT TTGGTTCTGGGTTGTTAACACTGTGTTGCGTCCTTATTTTTCTCTGATTGAAGAAAGTGAGTTTGGGAAGCGGTTTTATG TGAAGGACACTTCGCATATCCCCAATGTGTTGAAGTTTGAGTATGAACAAGCCAGAGCTGCCAGGAAAAACGTGCCCTCC ACCTCTAATAAGTCTGATTGATTGATGGGTATGTATGAATGATTTGATTGCTCTATTGTTTGGATTGAGATCCTCTATCC CCGAAAGTCGTGTCTCGTTTCCGGTATCCACCAATGATATTATGCCATGAATATGACATTTATAACCATACACAGATGAT GGTTTTTAATTGACACGACACAATCTCATTGGTGCGACAAAGAATGAGACACCATAGCGGATAAAGGATCTCGATCCCTA TTGCTTTGCCTCTTGTGTTGTTGTTGTTGTTTTTGTTCTTATAGCATGTTTGATTTAGATTGAAAGCACATTTATTTTGC TTTGGAAAGTGCGATGAAAGCAAGAAGTTTGAAGAGTTGGAGTTGGATGTTAAAGCAAACATACCCTTAGAATTGTAGGG TAGACTGGGGTTTCAAAATTATATACTCCATTAGACTAATTTTTTCTTTAAAAGTTGTTTCTAGAGTGAAGCAAGGAATT TATAGTGGTCTTACTCTGTTTACATGAAAGTGAGTGCAAAGAAATTTGAGTTCTGTTTAGTTATGTGTTATATAATTTGA TTTGATTCCAGGAACCACTCTTGAGGTGTTTGTTTTTATGCATGGCGGAAAATGTTGTTGCTTGTTATTCTGATTTATTT GTATTTTACAGGATTCATTGGTCATGTGAATGCTTTAAATTTTAATTAGAGTTTCTTTTTATTTATCTGACATGGTTAAG GAACTAACTGTCACCATGCTTGCTTTGTTTTGGCTAAGTTCTTAGTTTGGGTATAAAGTGAAAAGTCTCTCCCAAGTTAT TTGAGTATAACATAATATGCAAATTGTGAGCATGCAGACTAATATATCAAAGTTATTGAAATAAAGCCTAGAAATCTTGT AAACCGAAGCTCAAGGTTATTCGATTACAACCTTCCTTCCTATTTAATATTTTGACACCGACCCTTCTTTAGTTCATGTT GTGCTCCTAGTTGAAACTCACACCGCTGATGAAATTCTCTGACCATGTGTGTTATGGATAATTGTGATATGAAGTTTTTT GAATACTTGTTTAGTCATTTTCATGAAGGTTGGGATAAATAAATTGCATGGCATAAAAATGGAAACTCCAGGTATATATT TATGGCAATTCCCTGTCCATACTTGTTATCCTCTTTTTTGATATTGGCCACAACTATTCGAAGTCAGCAGCCTGTCCTCT TATATATGGTAGAAACTTCAAAACTTAATTTAATCCCCTTAAGGTTTCATTAGACTCATCGCCTCTCTTAATAAAGACAT TAGAGAGAAGCATTTAATGGATGACTGGGTTAGTACACAATCCACAATCAGTAGAACAGGTTTGGCCCCTTTAGCACAAC AACTCTGAAAAGTTCTGACCACAGTTCAAAAGCAGTCATTTCACTCCTAAAAATAAGCTTGTGTCTGGACAATAAAAGTT TTTGTCTTGTTCTTATTCTGATCCAGATTCTAATATGTGAGCTTTACAACACCTTCTAATTAGAACGTCTTTAAGTGAGC TCAAGAACTTCCTTGCGTAGTTTAAGTGACTCTTAGCACATTCTATATAAAATAATGTCGCTTAGAACGTCTTTGCTTGG CTTTAGCACGTAGACATCTTCTGTTAAGTGGATGTCAGAACTTGCTGTTGTCATCTTCTAGTAAGCTTTGGAATGACTCG ATATAAGGAGCCTTATTGCCCAGTGCTTCGCATCTTCTAATAAGTGACTACTAGAATTTGTCTTCCCTTTAACTCTGACT TTTCATTAGCACGTTGACCAGCCATTAGAACATGAATTTCTTCAGCAGAACTTGTTCCAATGCTCAGAATAAATACCTGC AAATTTTCAAACATAGAATATACTACAAAAACATGATATTAGAAGATTGTCTCATCAAAACTCAACTTGGGGATTTTCCA GATTTAAGTGTTGCACTCAAAAGAAAAGAGGGGGCGGGGTTATGTTGAGGTTGATGATAGTAGTTACTAGTTATTCTCGG TTCAATATTAAATTGTTCCATCCGAACCATTTTCCTGGTATTCATTTAGAAACATGTTTTTACTATCAGTCATGCTGTAC TCAATATTCAATTCTTGAGTGTTAAGAACATGATGTGCAGGGTGCTTACCCTTGTGCTGATTAAAAAAGGCTAGATTTTC TTCTTTCTTGAATGTTGCGCATAAAGGGAATTTTATAGCATCAGGTTTGCTTCCAAAAGAAAAGGGTGTTTTTTTTTTAT AACCCACTGTTAACAAACTCAAAAAAACTTACTAAGTTACTACTGTCATCCCTGCTACCAGTAGTTAGGATGCACACAAC AACAATATTTTCGTAGTAATTAATGCTAGCCCCATTTCACTTAGTGGTCTATATGTAGCTGAAATAATCCAACCTCACGG CAACAATAGTTATAGGACACAAAATTGTAGCTGTTTGGGTGCTAATTTGCAAGGACAGTGTTATTAGGGACTTATTGTTT CCTCCACAATTGTCCATAATGCATGCATGTGAACACAATGTCATGAATTTGAGGCTTGCAATAGTATGAGTTTCTATCTT CTGCAAAGAACATAAAATTCATAGTTATCTCTATTAACTTTAGGTTATACATATGCATCGATATGTTTTATTTTAAGTTT TTAACTGACCTTGCTCTGTTTCTGTTTTCCAAGCAGGTTGCTTCGAATTTTTCTTCTCTGGAGCATTCACTTTAAAAGCC AGCAATACAAATGATGAAGACTGAACAGAATAACAGAGCACATACACAGTGATATTTTAGGCCTATGATGCCTATGAAAT TAAAATGATGCAACAATAGATGGCTATCAGGTGTTATATAGTTTAGATAGACACTTGAAGATTTTAGCTTTTGTTCCTTT TGGGTCTAGACGAAGATACATTGATACACAATTAAGGCAGTAATTTTTCTCAAAGTTGATCAAGGAGTTGTCTAGCATGT TTTATCTTGTATGCATCTTAAACTTGCTCAAGATTGCATAATAAGTTATTTGCCACTCATATACGAAACTAGTTAATATT AGTTTGATTGCAATTTTCGTCTCTCAAGTATCACGATTGTGTGAAGTAGGTCGTCGTGTTTCAAAACGAGTGTTTTGGTT ATCTACACTTGCTGGCATTGTAAAATTGACATTTCCGTTGAAAAATTAACATAGTTGCTTATGTATTACTATGGAAGTCA AGTGGCAACTGAGGTCATGTCCACATCGTTGTTAATTGTACTATCAGCATCCTGCATGGCGAACACGTAAGTATCCTACT TGCCAAGTTTAGAATCAAACTTTTGGTGGATGTGTGGATCAAGCCCCCAACCCACGGGTTGCAAAACAAGAAATTAACCA CCAAGCAAGGGCTGAGTTAATGAATAATGGCGATGCTTATGCTTTGTACTCTATCTCAATAGAACGTTTTTCCATACAAT ACACTTAGTTCAAGTAATGTTA
CDS sequence (LotjaGi5g1v0075900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCACGGCGGCGCTGAAGGCCGTAACACTAACCCACGTCCGATACCAACGCGGCGACCGCATCGGCCACTTCCTCGC CTGGGTATCCCTCGTCCCAGTCTTCATCAGCCTCGGCGGTTTCTTCTGCCACTTCATGTTCCGCCGCGAGCTCCAAGGCA TCTTCTTCGCCGTCGGCCTCGTCATCTCGCAGTTCATCAACGAGCTCGTCAAAACCACCGTGCAACAAGCCCGCCCTGAA ACCTGCGCCATCCTCGAAATCTGCGATTCCCATGGCTGGCCCTCGAGTCACTGCCAGTACATGTTCTTCTTCGCCACCTA CCTCACCCTCGTCTACGCCTCCAAAGGGTTCACCGTTTTCCAGAACAATCTCATCGTTCACCTCGCTACCTGGTCGCTCG CGTTTCTCACTGTGTTCTCGAGGGTTTATCTGGGTTACCACACGCTTGCTCAGGTTTTCGCTGGTACCATTTTGGGGGTT TCTCTTGGTGCGATTTGGTTCTGGGTTGTTAACACTGTGTTGCGTCCTTATTTTTCTCTGATTGAAGAAAGTGAGTTTGG GAAGCGGTTTTATGTGAAGGACACTTCGCATATCCCCAATGTGTTGAAGTTTGAGTATGAACAAGCCAGAGCTGCCAGGA AAAACGTGCCCTCCACCTCTAATAAGTCTGATTGA
Protein sequence (LotjaGi5g1v0075900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTAALKAVTLTHVRYQRGDRIGHFLAWVSLVPVFISLGGFFCHFMFRRELQGIFFAVGLVISQFINELVKTTVQQARPE TCAILEICDSHGWPSSHCQYMFFFATYLTLVYASKGFTVFQNNLIVHLATWSLAFLTVFSRVYLGYHTLAQVFAGTILGV SLGAIWFWVVNTVLRPYFSLIEESEFGKRFYVKDTSHIPNVLKFEYEQARAARKNVPSTSNKSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 3 | 215 | 213 | 5.8E-78 | – | |
| PANTHER | 3 | 215 | 213 | 5.8E-78 | ||
| CDD | 9 | 167 | 159 | 3.25518E-47 | ||
| SUPERFAMILY | 12 | 172 | 161 | 5.63E-20 | ||
| TMHMM | 25 | 47 | 23 | - | – | |
| Phobius | 25 | 47 | 23 | - | – | |
| Phobius | 48 | 52 | 5 | - | – | |
| Phobius | 53 | 70 | 18 | - | – | |
| SMART | 53 | 167 | 115 | 0.0051 | ||
| Pfam | 55 | 172 | 118 | 2.0E-20 | ||
| Phobius | 71 | 123 | 53 | - | – | |
| Gene3D | 83 | 197 | 115 | 8.6E-17 | – | |
| TMHMM | 100 | 117 | 18 | - | – | |
| TMHMM | 124 | 143 | 20 | - | – | |
| Phobius | 124 | 144 | 21 | - | – | |
| Phobius | 145 | 149 | 5 | - | – | |
| TMHMM | 148 | 170 | 23 | - | – | |
| Phobius | 150 | 170 | 21 | - | – | |
| Phobius | 171 | 224 | 54 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0075900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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