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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0091700 |
| Transcript ID | LotjaGi5g1v0091700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT4G19830.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|O81864|FK171_ARATH Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic; TrEMBL-Plants: tr|A0A151U3F2|A0A151U3F2_CAJCA Peptidylprolyl isomerase; Found in the gene: LotjaGi5g1v0091700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:16014767..16017708) extracted from Lotus japonicus Gifu genome v1.2.
TTGAGTCTGGCTACTATCAATTCAGTTCAGTTAAAATAAGCTAATGGCCCAGCCCTCCTATATTGTAGATTTTTAATCAA TATTTGATTTTCCTTTACTAATCGCAATGGACCAAGTTAGAAGAGTTTCGATTCGAGTCCTTGTTTGGTGGCAGTTCTAG TTCTAGTACAACTGAGAAAAAGAAGATGATAAGAGAAATCTGTGTCCCTGCAAGAACAACACGTGTCTGTGCCCCTCTCC TTTACTCTACACATCGATGTAATAATAACATGTTTGCAACTTGTTCAGCATCTTCTACAATTCCAAGAAGATCTTTATCT CTGTCACTCATCTCCACCACTTTCTCAGCATTCATCTTCTCACTTCCTCCTCCTCCTTCCTCTTCTTCTCCCATTTCTTC TAAATTCCCCATTTCAGAATTCTTTGAGCTCCCCAATTCCGGTGGCGTTAAGGCATTGGACCTCCTTGTTGGTTCAGGTG ATGTTCCCGCAAATGGAGACCAGGTATCTTTCTCTTCTTCCATCCTTTATGCAATAGCTATTGCCATCCAATGCTATATA ACATATTCAGTGCATGATTATTGAATTTCCTTTTATAATGAATTCTCAGAAGAAGTTCATGTGAGCAAGTTTTGATTTGT AGAATCTATCCCGGGAAAAGATAAGCTGATCAAAACCATCGAACTGGTTTTATGCTGAGTTAGTCTTAGAATTTGGGGTT AAGTTAACTCTACCTCAAAAGCTATTAGGGGTGAGGGATGCTCTATCATTTATAAGGACTATATTGACCATATTTCTTTT CAATCAATGTGGAACTTCTAACATACCCCAACACGTAACATACCCTATCACTTGGACACATGGAGCATAGAATTAGAAAG GCTGAATATATGCGGAGTAGTCCATATATGAGAGGTCTCCAAGAAAGATAGACTCTTATATCATCTTAGAATTTGAGTTA GAGCTAACTCTACCCTTAAAAGCTAGCTAGGAGTGATGGTTGCCCTATCCTTTATGATTTAAATCTATGACCCAGTTTGG AAGAACTTATTTGAGCTTATCTGACAGCATAAGCTCTTATGCCAGTATTTGGGAGGGCTTATGCAAACAGCTTATGACCT GCCATAAGCTATTTTCAGCTTATTTTCATAAGCTACTCAGGATAGCTTATGAAAAACAGCTTATGCTTATATACAGCTTA TTTTTATTTTATTTCAATAAATTTTTAAAAATAGCTTATGAATAAGCGCTTATGTCATAAGCGCTTATGACTATAAGCAC TTAATTAAGTTGTTTTTCCAAACGGGGCCTATATTGATCATATCTCTAGTCAATGTCAATGTGAGACTTCTAATAGTTAG TTTCTGAACTAATTCTGAGAAAACATAATTTCATTGAAACAATCGAACTGGTTTTATGCCTTTCAAATTGTTGGTATAAT AAGAGAAGTTGTATGATTATATTTAATTAGTAATTTCATGCATATGTGTGTAAATTTAGTAGTTTGCTATATTCATTATG ATTCGGTGATAATTCTTGATATGTTTTTATTTTGAAGGTTGCAATTCATTACTATGGCCGGCTGGCAGCAAAACAAGGAT GGCGTTTTGACTCAACCTATGACCACAAAGATGAGAATGGGGATCCTAATCCTTTTGTCTTTGTCCTTGGTGCTGGCAAG GTAAGCCTCTATATCACTGCTGGCAATTGAGCATATCAAGCCTTTACTATTTGTTTCTGATATGTACATTTTCATTTTGC GCCTATGTAAAACTAAAATATTTCCTTTCCCTAAATTGCAAATTTTAACCTTTATGTTTTTCTAAAATTTCCATTTTCAA TGCTCTTTGTGCTTGGACAGTCAAAACGTCAGATTTCTAAATGAAGCATTTTTTATAAGTTGTAAATTTGTAATCAAATC GGTTCTTATGCTCATGTCATATTAAGAAAGGACTTAATCATATTTTGGAATCAAATGCTGCAGGTAATTGCTGGAATTGA TTTTGCAGTGAGATCGATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCTTCCCTTGGCTACCAGAACACATCAC AGGAGCCCATCCCACCTAATGTAAGAAGTATTTTCTGTTCCAGACTTTTAGGATAAAGATCTGATTGATTTCTTAAAATT TTCTCATTTTTGATGACATTAGAAAGTATGAAAGCGGAAAAGCAACACATGTCAAGACACATTTTGTTGAATTTATTGAA GGAGATCTGATTGATTTTTAACATTTTCTCGTTTTGGATCACATTAGAAAGTATGAAAACGGAAAAACAACACATGTCGA GACACATTTTGTTGAATTTATTAAAGTACTATAGCAAATAAGTGTCTAAAAATATGTTAATTTTCTGTTTTCACACTTTT GAACGGTATCCAAACAACTTCATTGTGATCCATCTTTCCCCCTTTCCTTTTTAGACAACTTCATTGTGATCCATCTTTCC CCCTTTCCTTTTTAGACGATGTACAATTTGCAAATGTATTTGAGATTATAGTATGAATCTCTTTTCTTTAATTCTTACAA TACTAATTTTTGGTTTTCTCCTCCAATCTTCCTCCAAAAACAAAAGTTCTTTGACAGGCAGAGGCTGTTCACTACCATTT TTAATCCAACTCGGCTTGCAAATGGTGAAGGCTCAACTTTAGGGACACTTATTTTTGATATTGAACTGGTTAGCCTTAGG CACCAGTGATATCAGCATATATATTGCTCGACTTTTTTTCTCTGTAATGTATATTGATTTTGGTCTATTGCAGATTATGC AATTATATCATGACCTCTACTTCATGATTAATTAGTTTTGCACTTCTGCTCAAAATGAACAACGCCATTTCAAAAATGGC TTATAGAGCTAGTTTTGATGTATGGACTCCCATAATATCCCCTCCAATCAGTTCAGTCTTTG
CDS sequence (LotjaGi5g1v0091700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAAGAGAAATCTGTGTCCCTGCAAGAACAACACGTGTCTGTGCCCCTCTCCTTTACTCTACACATCGATGTAATAA TAACATGTTTGCAACTTGTTCAGCATCTTCTACAATTCCAAGAAGATCTTTATCTCTGTCACTCATCTCCACCACTTTCT CAGCATTCATCTTCTCACTTCCTCCTCCTCCTTCCTCTTCTTCTCCCATTTCTTCTAAATTCCCCATTTCAGAATTCTTT GAGCTCCCCAATTCCGGTGGCGTTAAGGCATTGGACCTCCTTGTTGGTTCAGGTGATGTTCCCGCAAATGGAGACCAGGT TGCAATTCATTACTATGGCCGGCTGGCAGCAAAACAAGGATGGCGTTTTGACTCAACCTATGACCACAAAGATGAGAATG GGGATCCTAATCCTTTTGTCTTTGTCCTTGGTGCTGGCAAGGTAATTGCTGGAATTGATTTTGCAGTGAGATCGATGAAA GTAGGTGGTATTCGTAGAGTCATCATACCTCCTTCCCTTGGCTACCAGAACACATCACAGGAGCCCATCCCACCTAATTT CTTTGACAGGCAGAGGCTGTTCACTACCATTTTTAATCCAACTCGGCTTGCAAATGGTGAAGGCTCAACTTTAGGGACAC TTATTTTTGATATTGAACTGGTTAGCCTTAGGCACCAGTGA
Protein sequence (LotjaGi5g1v0091700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIREICVPARTTRVCAPLLYSTHRCNNNMFATCSASSTIPRRSLSLSLISTTFSAFIFSLPPPPSSSSPISSKFPISEFF ELPNSGGVKALDLLVGSGDVPANGDQVAIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGAGKVIAGIDFAVRSMK VGGIRRVIIPPSLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVSLRHQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 43 | 43 | - | – | |
| PANTHER | 22 | 226 | 205 | 4.0E-107 | – | |
| Phobius | 44 | 61 | 18 | - | – | |
| Phobius | 62 | 138 | 77 | - | – | |
| Gene3D | 81 | 226 | 146 | 2.2E-31 | – | |
| SUPERFAMILY | 85 | 224 | 140 | 1.79E-26 | – | |
| Pfam | 100 | 221 | 122 | 2.9E-23 | ||
| ProSiteProfiles | 104 | 224 | 121 | 19.693 | ||
| Phobius | 139 | 156 | 18 | - | – | |
| Phobius | 157 | 226 | 70 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi5g1v0091700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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