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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0102300 |
| Transcript ID | LotjaGi5g1v0102300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein trichome birefringence; TAIR: AT3G11570.1 TRICHOME BIREFRINGENCE-LIKE 8; Swiss-Prot: sp|Q9CAX1|TBL8_ARATH Protein trichome birefringence-like 8; TrEMBL-Plants: tr|A0A0R0L5V3|A0A0R0L5V3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0102300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:18483735..18489689) extracted from Lotus japonicus Gifu genome v1.2.
CCTACACAAATGCACCTGCTATCCATGCCTCACATAATTCCTAACAAAAAACAATGAATAGAGAATCAACCTACGCGCTC TCTTTTCTTCTTCTCATACTAATTTCCTTGTTCTTTTTCAATCTCGTGAACCCTTTTGATCGATACTCTCTTTCTCGCTT TGATTTCTTTTCATACATCACCCCCACCAATTCACAAAAACCACCACTAAAAGAAGCATGTGATTATTCTAGAGGCCAGT GGGTGTGGGACGAAACCTACCCTAATCAATTGTACGATGAAACCTGCCCCTTTCTAGATCCCGGCTTCCGATGCCGGCAA AATGGTCGGAAAGACGTTGATTATCGCAAATGGAGATGGCAACCGGACGGCTGTGACCTTCCCCGGTACGTATTGCACGT TTATCTTATACGTTTGATTTCATGAAGTGATGGACCCTTCGTGTGCATGCATGGCTATGTGTATGTGCCTGTTATGTATT CTTGATATGTTTTAGTGGATGTTTGAATCATATTCTTCATTGAAATTTGAGAACTCACGTTAAAAGGTGCCAAATGTAAA AGCAACCGTTGACAAAGGGTATTTGTAATTCCAGCACCCATGGCTTCAAAGTGGGTTTCAATGGTTTTTGGTTCCTTTTG GTCTCTCTTATTTTTCCGTATTTTGAGATCAAAAGGTATTTGGTATGAAAAAGTCATCAAAGGCAGCGAAACGGACGAGT GAGGCCCAGTTTATAGGAACACTTGTGGACCTTTAGAAGTGCAGGGATCTTTGTGTATATTGAGACATCAATTCACTCTT TATCTCAATATGTTAGAGTTGAGTTCATGTTTATAAATTAAGAAGCTTCAAGTTAGTGTCCTATATGAATAGAAAAAAAT ATAGATAACTCAACTTTATAAATTAAGAATCTTCAAGTGAGTGTCCAACATGAATAGAAGAGTATAGATTCTCTGCAGCA TCTGCATCATGTGCCACCAATAAATCACTTACAAATTTAATGGTTTATTATTGTGCAAATTTTAATTGTTTATAACTGTG CAAGAGAAAGCTGTAGAGAATTTCTAACTGCTACATATGATCCAAATTAGTGAATCCAAATACCACTAAATGAAACAGAT TATAATCTATTTATATTAGTAGTATTCATCCATGTATCAGAAAAGATGGAGTGTAGGGAGAATTGAGTCTCATCAATTTT TGTGTTTTTGACTCTCCTATTGCTAGATTCAATTCAGGAGTATTACTCTAAAGTCATTAGTGATATACAAATGAAATACT ATGAGTAATTTTGCGTGAGCACAAATCTTTGTGGATACAATCAAACAAAAGTTCAAAATACATTGAGTTGAATTTAACAA TAATGGTAGAAAAGACACCATAACATAATAAAGTTATTTTAATATTATATTCAACTTTAATTAGTCGTGTTACTTGTGTA TAATAAACATCATATTCATGCAAGTATTATTCGATGCAATGGTTGAACATGCATGTAATATTCAAACTTAAATCAAAGTA ATTGGCTACTCTTCACACTTTTTTCCTTTTAAGTTTGGTCTCTAGTTGAACCCAAATGAGTTTAACTGAAAGTCAACTGA GGTCTTGAATTACTTTCACATTTGGTGTACCGCAACATGAATTCTTGAATTTCAATGCATTGAATATGATTTTCAACTGA AAACCAAACATGCATGTGTGTATGAATTTCCATTGATTACACAACACAACACCAATAGCTATATCACTTGCATCACACAT AATTACAAAAGGTAGAGTCCAATCAGGTGCAGCAATAATGGGCAGTTACAAGACTCTCTTTTAACAGAGTAAAAGCATTC AAGCAAGCATCATCAAATACAAAATGAGCTTCTTTTTCAAGCAAGTTTGTCATAGGCTTAGCAATTTTAAAAAAATCTTT AATAAGTCACCACTAAGAACCTGCATGACCAAGAAAGCTTCTTATACTCCTTTCACATTCACATGAGCAGGTAACTTAGC AGTCACTTTGATTGTTGCTTTATCCACCTCTATTCCCAATTCAGACACACAGTAACCAAGAATAATTCCATTCTAACCAT AAAATGAGATTTCTCCCAATTTAGAACAAGGTTAGTATCTTGACACCTTTTCAGTACAAGAGTGAGATTAAACAGACAAT CATCAAAAGTGGATAAAGCTGAAATTGAAGTGATTGCTAAGTTACCTCCTCTTGTGAATGTGAAAGGAGTAAGAAGCTTT CTTGGTCATGCAAGTGTTTATAAACGATTTATTAAAGATTTTTTTAAAATTGCTAAGTTTGACAAACTTGCTTGAAAAAG AAGTTACTTTTGTTTTTGTGTTTGATGATGCTTAATTGAATGCTTTTAATGTGTTAAAAGAGTCTTATAACTATCCCTGT TATTGTTGCACATGATTGGACTCTACCTTTTGAAATTATATATGATGTAAGTGATATAGCTGTTGGGGCTGTGTTGTGTC AAAGGCATCAAATTATTGCTAGCTTCTAAGTCACACAGAGCTCCTTCCTAAATTGAAAGATCCTAGAAGCAAGTATTATT CGATGCAATGGTTGGACATGCGTGTAATATTCAAACTTAAATGAAAGTAACTGAATACCCTTTACACTTTTCTCCTTCTA TGTTTGGTTTTCAGTTGAACCCAACTGAGTTCAACTGAAAGCCAACTGAGGTCTTGAGTTACTTTCACATTTGGTGTCTC GCAACGTGAGTTCTCGAATTTGAATGCATTGAATGTGATTTTCAACTGAAAACTAAACAAGCATGTGTATTTGTATTTTT GTTGAACTCGACGTTGTGTCTTGAGATACGTGAAATTACGTTTGTGTTGGCTCTAGCGCCAAAACAAACATGCTCACTTA GCTGTTGAAGACTTCACTTGATTCATTTATGATTACTCTCAGGTTCAACGCCAGTGATCTCCTAGAGAGGAGTCGCAATG GACGCATTGTGTTTGCAGGAGATTCAGTGGGAAGAAACCAATGGGAATCATTCCTCTGCATGCTGACAAAAGGAGTGTCA AACGTGTCTAAAATATATGAAGTGAATGGAAATCCCATAAGCAAACACAAAGGCTACCTGGTCATGAGATTCCAAGAATA CAACATGACAGTAGAATACTACAGAGCACCCTTCTTGTGTATTATAGGTCGCCCACCACTCAATTCATCTAATGAAGTCA AAATGACTATCAGGCTTGACGAGTTGCACTGGTATTCCAATAAGTGGGTTGGTGCTGATGTTCTAGTTTTAAATTCGGGC CACTGGTGGAACCGAGACAAAACAATGAAAACGTAGAGGACCATCCTCAACCTTAAAAATTGCTTCATTTCTTTCTAAAA GCATCTTTTAATCCATAATAAAGCATCTGAAGGAGCTTTTATTTTATCTTTTTGCAGGGGCATCTACTTCCAGGAAGGAG GGAAGTTAAACATGTCCATGAACGTGATAGAAGCATTCAGGAAATCCTTGGAGACATGGAAGTCATGGACATTGCATAAT CTAGATCCTAGAAAGAGTTCCGTCTTCTTCCGGGGCTACTCCTCTGTTCATTACAGGCAAGAAAATTGACATTTTTTCAG TGTCACAAAAAAGAATTAATTTAAGTTTTAACTAGGTTCAAGCAAAAGATTGATAGAAACCCAAAAAAGTTATAAAAAAA ACTTTTCTAATTAAATCCCAAAATTAAAACTTAAGATCAATTTCCAAATAATAAATAGATCATATTACAAGTAAGATTAT TTTTTCTGAAAAATAAGCCCAATGCCCGTATGGAATAATAATCTCCACATTCTTAATTGACCAAAAAAAAAAAAAAATCT CCACATTCTTGCATGCCTAGTCGCTTTGTAGAATACAATGGGAGCATTGCAGAAACAGGAAAAAATGATTTAGATGATGA AACACTGCTTATGACAATTTCTATAAATCAGAAATATGCATTTTTCATTATGACAGGATTTTCTTTTGTGTTAATGTAAT GAGGGGAGGGGTTGTGATGAGATAGGCACTGAACTCCCTCATAAGAGTATTTACAGTGAATTTGCAGGAATGGCACATGG AATGAAGGAGGAGAGTGCGACATGGAAAAGGAACCAGAAAAGGACCATACAAAACTTGCAACTGAACCATATTATAACAC ATTTATATCTGATGTTGTCGAACAAATGCAATATGGGAGCTGGAAAGTCCACTTTTTGAACATCACATATCTTTCAGAAT TGAGGAAAGATGGTCACCCTTCAAAATATCGGGAACCGGGCACTCCACCTGATGCTCCTCAGGATTGTAGCCACTGGTGT TTGCCCGGCGTTCCGGACACGTGGAATGAACTTCTATATGCCCAACTTCTATCTAAGAAATTCGGCACTGATGACAAATT TCCAGAAAGTGGAGAACAAAGCCAATCCAATTTTGATCAGGCCAGAAAGAATGTTAAGTTTTGATAGCTATACATAAATC TTCAATGCTCCTGATCATTTAACTTCATCCCCTTCCTCTTCAGCGTTCATATCACTGGCTGTCATTTGCTTCATTTTCTC AAGCTGCCTCAACAGATCTAACCTCTCTGGTGCATACGTGGACGGAATCTGCAAAGATAGAATGCATATTAGATTCTTAT GACATGGTGAGTGGAGGATTAAAATCTGAACAGAAGATCAGGGAAAAAACAGGAAGGAAAGAAGAGAGAAGCAGCAGCCA ATCATGGTGTGCATACCAGAGCTGGTACATATCTCTGAATAGCAGCCAACATAGCTGCATGACCAACAGCAGTAACCTGT GCAACATAAGCATTGTCCTTAGTAGGTTACATCTAATATTGGAATGAATATGATAATTTACAACACATTAAGAAATAAGA AGTATTGGAAATATCATTTAAGTTCATTTCATTCATCTTTTCTTGTCTACATTTTCTATAAGCAGAAAGTTCCTTATCTT ATCTTTCCGCTTCAAGATTTATAGTACTAGTTTTGTGAGATCTCAGAAACTGCAAAGCCAGTTCCTGAGTTAGTAGTGGC GAGTTTATATTTATTTTGTTATTGAGAGAGTATGTTAATGTTATATCAGTGCGATGTATTAGAGAATCCTTCGGGTTTTC CCGTGCTATTAGAGCCGTCCAAGGGTTCAACCAACTTTGTAATTTCAAAGTTCTATTGCGGAGTATGAAATGAACTTCAA GTTTTGCTTGCAAAAAAAAAAAGAAACAGAAGAGTTAAAGGGGAATAAAAGAGTTAGATCATGCCATGTTAGGCAGTCAG ATTCACAAAGGAGAAAAATGAAGAAAGCAACAATCTCTCAGTTATGCAGAATCAATAATTGAATAAATTGACCATTAAAT CATCAAAAAAGTTAGAAAATGTTGGAGATATAATAATTAAGTCATTCATAAGCCTTCATCTAATAACAGGCTGTCCTTGA CATAGCATTAGATTCTTTATGATTAAGTGGTGCCGACATTGATCTAAAAATGGGTTTGGGCATTGTCACATTAAATCTTG CATCAAGGGGCATGTTATGAATGTGGTAAAGCCGTTCATGAGTCTTTGACTAAGAACGTAAGCATTCAGCAGAGTTGGTC CTTGAAATGGTGTTACAGCCTCCTTGACTGAGTGCTCAAGAATTAAATACTTGCAGAACCCTTTACTTTGAATATTAAAA ATCAATAAAAGTTGGCGATATAATAAAGCTATTCATAAACCTTCCATTTATTGCTTAAGCTTTCAGGTACGTTGGTCATA GATAAGGTAACCAAGTAGCCAACAGTGATTCTTGCCGCCCTCATGCTAATTCAAAGGTGACATTCAGCGCATGGTAATAA GGGATTAGTGCATCATCCACGCTTCAAACAAGGAGTACTTGCATAAAGTACATGTTAGATATGCAACAAAGATCTTCATA AGTGTTCAACTATAGTTTAAAATTTGGGATTCAAC
CDS sequence (LotjaGi5g1v0102300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATAGAGAATCAACCTACGCGCTCTCTTTTCTTCTTCTCATACTAATTTCCTTGTTCTTTTTCAATCTCGTGAACCC TTTTGATCGATACTCTCTTTCTCGCTTTGATTTCTTTTCATACATCACCCCCACCAATTCACAAAAACCACCACTAAAAG AAGCATGTGATTATTCTAGAGGCCAGTGGGTGTGGGACGAAACCTACCCTAATCAATTGTACGATGAAACCTGCCCCTTT CTAGATCCCGGCTTCCGATGCCGGCAAAATGGTCGGAAAGACGTTGATTATCGCAAATGGAGATGGCAACCGGACGGCTG TGACCTTCCCCGGTTCAACGCCAGTGATCTCCTAGAGAGGAGTCGCAATGGACGCATTGTGTTTGCAGGAGATTCAGTGG GAAGAAACCAATGGGAATCATTCCTCTGCATGCTGACAAAAGGAGTGTCAAACGTGTCTAAAATATATGAAGTGAATGGA AATCCCATAAGCAAACACAAAGGCTACCTGGTCATGAGATTCCAAGAATACAACATGACAGTAGAATACTACAGAGCACC CTTCTTGTGTATTATAGGTCGCCCACCACTCAATTCATCTAATGAAGTCAAAATGACTATCAGGCTTGACGAGTTGCACT GGTATTCCAATAAGTGGGTTGGTGCTGATGTTCTAGTTTTAAATTCGGGCCACTGGTGGAACCGAGACAAAACAATGAAA ACGGGCATCTACTTCCAGGAAGGAGGGAAGTTAAACATGTCCATGAACGTGATAGAAGCATTCAGGAAATCCTTGGAGAC ATGGAAGTCATGGACATTGCATAATCTAGATCCTAGAAAGAGTTCCGTCTTCTTCCGGGGCTACTCCTCTGTTCATTACA GGAATGGCACATGGAATGAAGGAGGAGAGTGCGACATGGAAAAGGAACCAGAAAAGGACCATACAAAACTTGCAACTGAA CCATATTATAACACATTTATATCTGATGTTGTCGAACAAATGCAATATGGGAGCTGGAAAGTCCACTTTTTGAACATCAC ATATCTTTCAGAATTGAGGAAAGATGGTCACCCTTCAAAATATCGGGAACCGGGCACTCCACCTGATGCTCCTCAGGATT GTAGCCACTGGTGTTTGCCCGGCGTTCCGGACACGTGGAATGAACTTCTATATGCCCAACTTCTATCTAAGAAATTCGGC ACTGATGACAAATTTCCAGAAAGTGGAGAACAAAGCCAATCCAATTTTGATCAGGCCAGAAAGAATGTTAAGTTTTGA
Protein sequence (LotjaGi5g1v0102300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRESTYALSFLLLILISLFFFNLVNPFDRYSLSRFDFFSYITPTNSQKPPLKEACDYSRGQWVWDETYPNQLYDETCPF LDPGFRCRQNGRKDVDYRKWRWQPDGCDLPRFNASDLLERSRNGRIVFAGDSVGRNQWESFLCMLTKGVSNVSKIYEVNG NPISKHKGYLVMRFQEYNMTVEYYRAPFLCIIGRPPLNSSNEVKMTIRLDELHWYSNKWVGADVLVLNSGHWWNRDKTMK TGIYFQEGGKLNMSMNVIEAFRKSLETWKSWTLHNLDPRKSSVFFRGYSSVHYRNGTWNEGGECDMEKEPEKDHTKLATE PYYNTFISDVVEQMQYGSWKVHFLNITYLSELRKDGHPSKYREPGTPPDAPQDCSHWCLPGVPDTWNELLYAQLLSKKFG TDDKFPESGEQSQSNFDQARKNVKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 25 | 20 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 14 | 397 | 384 | 1.4E-176 | ||
| PANTHER | 14 | 397 | 384 | 1.4E-176 | ||
| Phobius | 26 | 425 | 400 | - | – | |
| Pfam | 55 | 108 | 54 | 5.7E-20 | ||
| Pfam | 109 | 392 | 284 | 4.3E-94 | ||
| MobiDBLite | 402 | 425 | 24 | - | – | |
| MobiDBLite | 406 | 425 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0102300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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