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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0107100 |
| Transcript ID | LotjaGi5g1v0107100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | EEIG1/EHBP1 protein amino-terminal domain protein; TAIR: AT3G11760.1 structural maintenance of chromosomes flexible hinge domain protein; TrEMBL-Plants: tr|I1L9M1|I1L9M1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0107100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:20271206..20275432) extracted from Lotus japonicus Gifu genome v1.2.
AAGGATTAGTCATTACTTTAAACCTAAAAAAAAATGAAAACATAATAGGAAAACTTGGTCACACGACACCGTCCACTTAA GAAACAGAAATAGGAACATCTAGTACTAAATAAAACGGCGTTAAAACACACACAATGACACAAACACAAACACATTCGCA TCGTGTTGAAGATCCGTGGTAGACTCTTTCTCCCTTTCCCTTTTTCCCTTTCTCCTTCTCAACTCAACAACAACAACAAC CCTTTTTCCCTTCAACATTTTCCCTCACAACAACCACACGAAGAACCAGAAGATGGTGGTGAAGATGATGAAGAAGTGGA GGCCATGGCCTCCACTGGTATCTCGAAAGTACGAGGTCAAGCTTCTTGTGAGGACCCTCCAAGGCTGCGATCTGCTGCGG GAAGGTGCACGGGAAGGGATGTTCGCCGTCGAGATTCGCTGGAAGGGTCCTAAGCTTGCTCTCAGCTCCCTCCGCCGCAG CGCCGTCGCTAGAAACTTCACTAAGGAGGCTGCCGCTGGCTGCGACGGTGACAACAACAATGATGTCGTTTTGTGGGATG AGGAGTTTCAGAGCTTCTGCACGCTTTCTGCTTACAAGGACAACAATAATGCCTTTCATCCTTGGGAGATCGCTTTCACT GTCTTCAATGTTTGTCTCTCTTTCTTGTTCAATTTGTTAAGACAATGTTGTAATCTGTGAAAATTGAGTTTTTTTCATCT TGGGTATGATGAAATGTTTTCAATTTTTAGAAAAAAATGAAAACTTTATTTGTTTCAATTATTTCATGGATTTGGACAAA AATTCCCATCAATTGAACTTTGATGGGCTTTTCTAGATTCTGATTTCTTCAAACAAATTTTGGAATTTTTCCCTTTTCAA TTTTGGGGGTGGGGGGATTTTTTTATTTTTTTATAATTTTTTTTTCTGTTTAGGTTCTAGGGGTTAATTGTTGCTAAATT AGGTTTGAATTGTTGCTAAATTAGGTTTGAATTGGTTATCTGTTGCAGGGGTTGAATCAAAGGCCAAAAGTTCCTGTGAT TGGAACTGCTTCTTTGAATCTAGCTGAGTTTGCATCTGTGATTGATCAAAAGGATTTTGACTTGAACATTCCACTCACAA TCCCTGGAGGTTCTGCTGTTGAGCCTTCTCCTTCTCTCAGTGTATGTCCATACATGATTTTTCATTCACTGTTCAATCTT TTCATGCCATCATGTTTGGATATTATAAACTGTTTCAATTGACACAGGAATAGTTCTTTTTTTACTCAAAATTTGACACT TCCCATTTGTTGTTTCTGTACTCATCAGAACTACTCTTGATTGTGCTCAGATATCAATTAGCTTAGTGGAGCTAAGAGCT GCTCAAGAGAGTTCAGAGCTAGTCCAAAAATCAGTGGTGCCTGTTGCATCACCCCTGGCCCAGACAGGAGAAACTAACTT GGCAGAAAAAGATGAGGTTTCCACCATCAAAGCTGGTCTCAGGAAAGTGAAGATTTTGACTGAGTTTGTATCAGCCAGGA AGGCCAGAAAATCAAGCCGTGAGGAAGAGGGAAGTGAAGGCAATTTGTCTGCCAGGAGTGAGGATGGTGAGTACAATTAC CCCTTTGACTCTGACTCCCTTGATGATTTTGAGGAAGGGGAGTCAGATGAGGTGAAGGAGGATCCTAATGTTAGGAAATC ATTCAGTTATGGGAAACTTGCCTATGCGAACGCTGAGGGGTCATTCTATTCCAGCATCAGGGTAAAGAGTGATGATGATG TTGATGAAGGCTGGGTTTACTACAGCAATCACATATCAGACACTGGGAGCTTGCCGGTAGAGGATTCAAGCTCAACTGTT TCCTCCTCCGAGCCTTATTTATCGCAAAGTTCGAAGCGCAGCATATTGCCTTGGAGGAAGAGGAAGTTGAGTTTCAGGTC TCCTAAATCCAAGGGAGAGCCATTGCTAAAGAAGGCCTATGGAGAAGAAGGTGGTGATGACATTGATTTTGATCGTAGGC AGCTTAGCTCTGATGAATCCCTTTCACCTGGGGTAAGACCTTACTTGTTATTTTTCATTGCTTTAATGATCTACATGTTT ATGACACAAAAGAATAGGCTGTTGGGTGTCCTAAAAATTGATATTAAGGTCTTTGTGATTATTAATTACCTCATGACTAA TGATCTGAGTGCATGCTGGTTAGCTTTGAGAGGAGTAAGTTTAGACATAATTTACCCAGGCGAAGTAAGTTTGGATATAA TTGATTCTGGCAAAATTGGTTATGTGATAAGTGAGTTGAAAGTGATGTCATTTTTGTTTGGATATGTTTCTATAAAATTG ATTTTTATAGGAAAATAATGGAAATGTCTTGTGAGGAACTAAAATCACTTTCATGTTAACTAAAAAACTTAGTCTTTTTG CTTTGGCCTTAATGTGATTTGGTCTGCCATAAGTGCTTCTAAGAATTTCACTTAAATATGTTTTGATGATGAAAAACCAC TTTAGAGAAGAATAAAAGTGCTTATGTGGATGACCAACACGAAACCAAACATATACTAAGGAATTAGTCACAGTAGCTTC CAAACCTTTTTGCTACTTTTGTTGCACTCTCATACTCTTGTTAATTAGCTTATAAGTACTGATGTTTCACACTGTATGCC AATCGCAGAAAACTGAGGATGATTCATGTGCAAATCGAACATCAATATCTGAATTTGGGGATGACAATTTTGCAGTAGGG AGCTGGGAGCAGAAAGAAGTAATGAGCCGTGATGGCCACATGAAACTTCAGGCCCAGGTTTTCTTTGCCTCAATTGATCA GCGCAGCGAACGCGCAGCCGGTGAGAGTGCATGTACAGCTCTGGTTGCTGTAATTGCTGATTGGTTCCAAAACAACCATG ATCTTATGCCCATAAAGTCCCAATTTGATAGTCTAATTCGAGAAGGCTCATTAGAATGGAGGAACTTATGTGAAAACCAG ACATACATGGAGCGATTCCCCGACAAGCATTTTGATCTCGAGACAGTCATTCAAGCCAAAACACGCCCCCTTTCTGTGGT TCCTGGGAAGTCTTTCATTGGTTTTTTTCATCCAGAAGGAATGGATGAGGGTAGATTTGATTTCTTGCACGGGGCCATGT CTTTTGATAACATTTGGGATGAGATTAGTCATAATGCTGGGCATGATTGCACCTACAATGGTGAACCCCAGGTTTATATT ATTAGTTGGAATGACCATTTCTTCATCCTTAAAGTTGAAGTTGATGCTTACTACATCATTGACACTTTGGGGGAGAGGCT TTATGAAGGATGCAATCAGGCATACATCTTGAAATTTGACAGCAACACATTGATACACAAAATGCCAGAAGTTGCACAAT CATCAGATGAGAAAACAATTACTGACCAACAACAAACTGTTGCAGATGTATTAGAGAACAATGACAAGCAGATCCAGCAA GTTAATGCCAAGGAGGCTGATTCTGTTGCGGCGGAGACCAAAGAAGAACGGTTGAAAAGTGAGCAGGAAGAGGAGGTTGT GTGCAGAGGGAAGGACGCATGCAAAGAGTATATCAAGAGTTTCTTGGCAGCAATTCCCATCAGAGAATTGCAAGCAGATG TCAAAAAAGGTCTAGTATCATCAACTCCACTTCATCATAGGCTACAAATTGAGTTTCACTATACTCAGTTGTTGCAGTCT TATGATATAGTTCCAGTGGCTGAAGCATCCATGACTGTGCCAGAGACTCTAGCTCTTGCAGTAACTGAGGTTTTGACATA ATTGTACTGCTAATTAAAGAAAGTGCAGTTACTCTAACTAGTCTTACTTCGTATTTTTGTAAGTGTGTTTTCTGATTTTG ATGTGAAATTAACGAAACTTAGAGGCTCATTTGAGCTTTTGATGATGCTAAATGAGTGAGTTGAGGTTGTGTCTTTTCGT AGTTGGGGGTTATGTCTTGACAAATCAAATCTTGGGAAGTGTATCGACCTGTGAATGTGTGTGAAATTTCCTTTTCATCT GAGCTCAGACTTTTGGCACCTAACATGTAGGCGTGTGAATTGGCTTTATAACTTTTTGCAGATTGCTACGTTTAACAGTT GTTTTGCACTCTTGTTCCAAGATTCTATTTATTTATTTATTTATTCGAATGGTCAATTATTGGCCATGTTCTTCTCTCGG ACTTATCCGGAGGAAAATTGGGTTTCTTTCTTTAGTTATTGTTCAGTCCCCATATTTATAACCCAAT
CDS sequence (LotjaGi5g1v0107100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGTGAAGATGATGAAGAAGTGGAGGCCATGGCCTCCACTGGTATCTCGAAAGTACGAGGTCAAGCTTCTTGTGAG GACCCTCCAAGGCTGCGATCTGCTGCGGGAAGGTGCACGGGAAGGGATGTTCGCCGTCGAGATTCGCTGGAAGGGTCCTA AGCTTGCTCTCAGCTCCCTCCGCCGCAGCGCCGTCGCTAGAAACTTCACTAAGGAGGCTGCCGCTGGCTGCGACGGTGAC AACAACAATGATGTCGTTTTGTGGGATGAGGAGTTTCAGAGCTTCTGCACGCTTTCTGCTTACAAGGACAACAATAATGC CTTTCATCCTTGGGAGATCGCTTTCACTGTCTTCAATGGGTTGAATCAAAGGCCAAAAGTTCCTGTGATTGGAACTGCTT CTTTGAATCTAGCTGAGTTTGCATCTGTGATTGATCAAAAGGATTTTGACTTGAACATTCCACTCACAATCCCTGGAGGT TCTGCTGTTGAGCCTTCTCCTTCTCTCAGTATATCAATTAGCTTAGTGGAGCTAAGAGCTGCTCAAGAGAGTTCAGAGCT AGTCCAAAAATCAGTGGTGCCTGTTGCATCACCCCTGGCCCAGACAGGAGAAACTAACTTGGCAGAAAAAGATGAGGTTT CCACCATCAAAGCTGGTCTCAGGAAAGTGAAGATTTTGACTGAGTTTGTATCAGCCAGGAAGGCCAGAAAATCAAGCCGT GAGGAAGAGGGAAGTGAAGGCAATTTGTCTGCCAGGAGTGAGGATGGTGAGTACAATTACCCCTTTGACTCTGACTCCCT TGATGATTTTGAGGAAGGGGAGTCAGATGAGGTGAAGGAGGATCCTAATGTTAGGAAATCATTCAGTTATGGGAAACTTG CCTATGCGAACGCTGAGGGGTCATTCTATTCCAGCATCAGGGTAAAGAGTGATGATGATGTTGATGAAGGCTGGGTTTAC TACAGCAATCACATATCAGACACTGGGAGCTTGCCGGTAGAGGATTCAAGCTCAACTGTTTCCTCCTCCGAGCCTTATTT ATCGCAAAGTTCGAAGCGCAGCATATTGCCTTGGAGGAAGAGGAAGTTGAGTTTCAGGTCTCCTAAATCCAAGGGAGAGC CATTGCTAAAGAAGGCCTATGGAGAAGAAGGTGGTGATGACATTGATTTTGATCGTAGGCAGCTTAGCTCTGATGAATCC CTTTCACCTGGGAAAACTGAGGATGATTCATGTGCAAATCGAACATCAATATCTGAATTTGGGGATGACAATTTTGCAGT AGGGAGCTGGGAGCAGAAAGAAGTAATGAGCCGTGATGGCCACATGAAACTTCAGGCCCAGGTTTTCTTTGCCTCAATTG ATCAGCGCAGCGAACGCGCAGCCGGTGAGAGTGCATGTACAGCTCTGGTTGCTGTAATTGCTGATTGGTTCCAAAACAAC CATGATCTTATGCCCATAAAGTCCCAATTTGATAGTCTAATTCGAGAAGGCTCATTAGAATGGAGGAACTTATGTGAAAA CCAGACATACATGGAGCGATTCCCCGACAAGCATTTTGATCTCGAGACAGTCATTCAAGCCAAAACACGCCCCCTTTCTG TGGTTCCTGGGAAGTCTTTCATTGGTTTTTTTCATCCAGAAGGAATGGATGAGGGTAGATTTGATTTCTTGCACGGGGCC ATGTCTTTTGATAACATTTGGGATGAGATTAGTCATAATGCTGGGCATGATTGCACCTACAATGGTGAACCCCAGGTTTA TATTATTAGTTGGAATGACCATTTCTTCATCCTTAAAGTTGAAGTTGATGCTTACTACATCATTGACACTTTGGGGGAGA GGCTTTATGAAGGATGCAATCAGGCATACATCTTGAAATTTGACAGCAACACATTGATACACAAAATGCCAGAAGTTGCA CAATCATCAGATGAGAAAACAATTACTGACCAACAACAAACTGTTGCAGATGTATTAGAGAACAATGACAAGCAGATCCA GCAAGTTAATGCCAAGGAGGCTGATTCTGTTGCGGCGGAGACCAAAGAAGAACGGTTGAAAAGTGAGCAGGAAGAGGAGG TTGTGTGCAGAGGGAAGGACGCATGCAAAGAGTATATCAAGAGTTTCTTGGCAGCAATTCCCATCAGAGAATTGCAAGCA GATGTCAAAAAAGGTCTAGTATCATCAACTCCACTTCATCATAGGCTACAAATTGAGTTTCACTATACTCAGTTGTTGCA GTCTTATGATATAGTTCCAGTGGCTGAAGCATCCATGACTGTGCCAGAGACTCTAGCTCTTGCAGTAACTGAGGTTTTGA CATAA
Protein sequence (LotjaGi5g1v0107100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVKMMKKWRPWPPLVSRKYEVKLLVRTLQGCDLLREGAREGMFAVEIRWKGPKLALSSLRRSAVARNFTKEAAAGCDGD NNNDVVLWDEEFQSFCTLSAYKDNNNAFHPWEIAFTVFNGLNQRPKVPVIGTASLNLAEFASVIDQKDFDLNIPLTIPGG SAVEPSPSLSISISLVELRAAQESSELVQKSVVPVASPLAQTGETNLAEKDEVSTIKAGLRKVKILTEFVSARKARKSSR EEEGSEGNLSARSEDGEYNYPFDSDSLDDFEEGESDEVKEDPNVRKSFSYGKLAYANAEGSFYSSIRVKSDDDVDEGWVY YSNHISDTGSLPVEDSSSTVSSSEPYLSQSSKRSILPWRKRKLSFRSPKSKGEPLLKKAYGEEGGDDIDFDRRQLSSDES LSPGKTEDDSCANRTSISEFGDDNFAVGSWEQKEVMSRDGHMKLQAQVFFASIDQRSERAAGESACTALVAVIADWFQNN HDLMPIKSQFDSLIREGSLEWRNLCENQTYMERFPDKHFDLETVIQAKTRPLSVVPGKSFIGFFHPEGMDEGRFDFLHGA MSFDNIWDEISHNAGHDCTYNGEPQVYIISWNDHFFILKVEVDAYYIIDTLGERLYEGCNQAYILKFDSNTLIHKMPEVA QSSDEKTITDQQQTVADVLENNDKQIQQVNAKEADSVAAETKEERLKSEQEEEVVCRGKDACKEYIKSFLAAIPIRELQA DVKKGLVSSTPLHHRLQIEFHYTQLLQSYDIVPVAEASMTVPETLALAVTEVLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 759 | 759 | 0.0 | – | |
| PANTHER | 1 | 759 | 759 | 0.0 | – | |
| ProSiteProfiles | 10 | 177 | 168 | 22.261 | ||
| Pfam | 80 | 179 | 100 | 2.4E-10 | ||
| MobiDBLite | 236 | 283 | 48 | - | – | |
| MobiDBLite | 236 | 250 | 15 | - | – | |
| MobiDBLite | 261 | 277 | 17 | - | – | |
| MobiDBLite | 366 | 414 | 49 | - | – | |
| MobiDBLite | 367 | 405 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0107100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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