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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0111800 |
| Transcript ID | LotjaGi5g1v0111800.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Universal stress protein A-like protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:22154460..22157705) extracted from Lotus japonicus Gifu genome v1.2.
AGATAAGGCTAAAGTTTTCTTTTTTTTTGAAGTCGGCTAAAGTTTTCACTTTAAATAGTGTTATTACTTTTTTTTGAATA AAAGCAATAAAAGCTAGGTTGAGGATCAGATAGACACAGCACAAGATCGAGCTGCATGCCAAGTGATGTAAGTGATTAAG ATTAAGATAAGATAAGATGTAGATGAAAGAAAAGATTAAAGTTTTCATTTTATATATAAATTAAATAGTGTTGTTACTTT TTAAGAATGGAAGCTATAAAAGCTACGCTGATCAGGGTCATTATTTCATACGGACACAGCATAAGATCGAGTTGCAAGCA ATAATGGAAGCAAGTGGAGGCGGTGATGTGCAAGTGAGCGGTGGTGCAGGGGAGCGCAGGATGAAGATGAAGGTGATGGT GGCTATTGATGAAAGTGAATTGAGTTTCCATGCTCTTAAGTGGGCTCTTGACAACGTCTTAAACACCATGGCAACTACTG CAACACCAGATGAGAATATTGAAGGCGGCGGTGGCGGCGGCATGGTGTTTCTGGTTCACATTGAGCCCGTTTTCCACCAC GCTGTGTATCCCATTGGATCTGCCGGAGCTGGTTTGTACATATCCTTCTTTCTTCTTGTGATATATGGTTCTATTTACAA AATGGGGATAGAAGATCTTTACCCCTTATTATAGCTATATTTTTTATTTCTAAATATTGTCTCAATCTTCATAATTAATA CTATGAGTTAACATCACTTTATCTTAGAGTATATCCAATACTAATTCTTAGGAGTGAGTTCTTATGCACTATTTGTAGTG GCTCGGACTCCCACATATGTTTAAGTAATTCTTAAGTATTTTTTACATATTTCGCACCAATCACACGTTATTTACTTTGA GTTTTCTTAGCACTAAAATTATTTTTTTTATGTTAAGAATTCATAAAGCAAGGTTGTTTATATAAGAACTAGTTTTTTTT TTAAGAATTAATAACTCTACATCAACCATTTTCAATGCTTAAGAATTTGATCTAAGTTCTTAACTTAAGAATTCACCTCT AAGAACTAGTATTTGAGATGTTTTTCGCTGCTCACTAATGACATTAGTAATATTTAAACATTTAAAAAATTCCGCTTATG GCATGGGTCAATAATGAGTCACTCAAGTCCATAGTGATTTTACAACGTCATCAAAATATATCCTTCTTTCTTCTTATGAT ACGGTGCTATGTAGTATGTACCTACATCTTGTGTCCCTGTTTCATGGTTTTTCTATGTCTCATCAATAGAATTATGTTAC CTCAACTTAAAATTACTCATATGATTATTATTATCATGTTCCGTGAATATAAACATAAATTAAAAAAAATCAAACTTATA ATAATTTTTCACTATGCAAAGCAAGCGGGTTTGCTATCGTAACCAAGAACTTGTCCTTGTCCAATAACCAAGGCGGGACA TGGTAAGGAGCAAGGAGCAGAGAGAATAAGGGGCTTCATAACCTTACCTTATTATTTAAGGAAACAACAAGTAATTGAGA AATTTATATGGATGCAAAAGCAAGTAAAATAATTTAATCTTTATTTTTTGTGTATGAATATAAGTGTGAATTGGTAAAAC TAGTTTAGTTTATGTATCATGTATGAGCCTTATTTCACCACTCCCAAAAATATTCTTCAAGTCCGCCGCTCTGATTACTC TGTTCCATTTTCACTCCCTGTTGAGTGTGATGAATGGAACCTTTCCTTTGTATAGTATGTATATTTTCAATGTGGTTATT AGAATGTAAAGCTTATGCGCTTTCTACTAAATAAATGTGACCTCTAATATGCCCCCTTCAACAGTTTACTATCCTCCGTC TGTGGTGGAGGGCTCCGTGAAGAAGGCCCAACAAGAAAAATCTGTATCTATTGTTTCACGGGCATTGCATATGTGCAAGG ATAAGCAGGTAAATTCCTTATGCACTTCTTCTATATCATATCCACCTTATCAAGAAAGTAGTTATAAAAAACAGCACTTG TCAATTTACACTAAAGTCGGATATTATATGCTAGCAATTTGTGACAGTTTTTAAAATTATAAATTGCATTTATAAACTTT GCAAAGTATTGCAGTTTGATATGGTGCTCGTTACTATTTTAGTGTACACATCATTTCATTTATAAAAAAGTTAGCAAAAC ATTTTTTATAGAACAATCTTTCATTGATTGGTTGTTTCATGTTAGGTCTAAGAAAAATATATATATAAGTCATACTTTCA ATTTAATAATACGCAAATAAATTTTAATTAATTAATGACAGAGTCTTGAAAAACAGTACGTGTGTTAAAGTAAGTGTTTG CCAGCAATCGTAATCAAAATCTTGTACCTTATCCATCAAATTCATCCAATGAGAACATGCTATGAAAACGCAGATAAAAG CACAAAGTGTAATTCTTAATGGAGACCCAAGGGAAATGATTTGTCAGGCCGTAGAGCAAATGCAAGTTGATCTTTTAATC ATGGGTAGCCGAGGCCTTGGCAAGATCAAAAGGTTTGTGTTGGTTTTAAGACGATTCTAGCCCAATATTCTACTCTTCGT TTATATATTTAGTGTTTTGCAATTTTTATACTTTTATTGTAATCTTCAATATTATTGATATCATTTTGATTTCAATTTAA CCTGGATGATTCTTAACCTAATAATACATTTGGTGTGTAACAGGACATTTCTTGGTAGTGTGAGTGACTATTGTGCACAT CATGCAAAAGCACCGATCCTCATTGTGAAACCACAAGAGGAGGACCATAAAAAGAAGTAACCAAATCAGCGTTTATGTTT AAGCTAGCACGCCTTGTGATGGATGAATTAAGTATTTTCATGTTGTTTTCTATAGGTTGATGGTTTATATAATTTGTAAC TAATAACGCATGTATCGAGAGAAATAAACTTTTGTCTTTCTAGCTCTACTCTAAATAAAAAAAGAATTTCAACAATCAAC ACACAGCTGATTCTTCGTTTAGGTGGTTCCTCATTCCTCAATGAAGGAATTTTGATCTTCAATATGGGCTATTAATATGG AAAATGTTTGGTCTATAGGACACACCTAGCTAGCTAGTGTGATGACAAGAGAAATAATAGTAATGATATATATGATCTTA TCTCTTAAGAAAAAAAGATAGAGATAAGAATAGGGTGTATATAAATGTATGTACTCTTTTAATGTTTATGATTGAACTCT TTAAAACACTTTAAAAAAGCTTTAGTTTTACTTTATTATCTCAATT
CDS sequence (LotjaGi5g1v0111800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAGTGATGGTCATTATTTCATACGGACACAGCATAAGATCGAGTTGCAAGCAATAATGGAAGCAAGTGGAGGCGG TGATGTGCAAGTGAGCGGTGGTGCAGGGGAGCGCAGGATGAAGATGAAGGTGATGGTGGCTATTGATGAAAGTGAATTGA GTTTCCATGCTCTTAAGTGGGCTCTTGACAACGTCTTAAACACCATGGCAACTACTGCAACACCAGATGAGAATATTGAA GGCGGCGGTGGCGGCGGCATGGTGTTTCTGGTTCACATTGAGCCCGTTTTCCACCACGCTGTGTATCCCATTGGATCTGC CGGAGCTGTTTACTATCCTCCGTCTGTGGTGGAGGGCTCCGTGAAGAAGGCCCAACAAGAAAAATCTGTATCTATTGTTT CACGGGCATTGCATATGTGCAAGGATAAGCAGATAAAAGCACAAAGTGTAATTCTTAATGGAGACCCAAGGGAAATGATT TGTCAGGCCGTAGAGCAAATGCAAGTTGATCTTTTAATCATGGGTAGCCGAGGCCTTGGCAAGATCAAAAGGACATTTCT TGGTAGTGTGAGTGACTATTGTGCACATCATGCAAAAGCACCGATCCTCATTGTGAAACCACAAGAGGAGGACCATAAAA AGAAGTAA
Protein sequence (LotjaGi5g1v0111800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSDGHYFIRTQHKIELQAIMEASGGGDVQVSGGAGERRMKMKVMVAIDESELSFHALKWALDNVLNTMATTATPDENIE GGGGGGMVFLVHIEPVFHHAVYPIGSAGAVYYPPSVVEGSVKKAQQEKSVSIVSRALHMCKDKQIKAQSVILNGDPREMI CQAVEQMQVDLLIMGSRGLGKIKRTFLGSVSDYCAHHAKAPILIVKPQEEDHKKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 33 | 213 | 181 | 1.3E-78 | – | |
| PANTHER | 33 | 213 | 181 | 1.3E-78 | – | |
| Gene3D | 38 | 215 | 178 | 1.2E-41 | ||
| PRINTS | 41 | 59 | 19 | 8.7E-16 | ||
| SUPERFAMILY | 42 | 210 | 169 | 2.21E-30 | – | |
| CDD | 43 | 205 | 163 | 7.66568E-29 | – | |
| Pfam | 110 | 206 | 97 | 6.0E-22 | ||
| PRINTS | 166 | 178 | 13 | 8.7E-16 | ||
| PRINTS | 184 | 206 | 23 | 8.7E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0111800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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