Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0111800 |
| Transcript ID | LotjaGi5g1v0111800.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Universal stress protein A-like protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:22154460..22157705) extracted from Lotus japonicus Gifu genome v1.2.
AGATAAGGCTAAAGTTTTCTTTTTTTTTGAAGTCGGCTAAAGTTTTCACTTTAAATAGTGTTATTACTTTTTTTTGAATA AAAGCAATAAAAGCTAGGTTGAGGATCAGATAGACACAGCACAAGATCGAGCTGCATGCCAAGTGATGTAAGTGATTAAG ATTAAGATAAGATAAGATGTAGATGAAAGAAAAGATTAAAGTTTTCATTTTATATATAAATTAAATAGTGTTGTTACTTT TTAAGAATGGAAGCTATAAAAGCTACGCTGATCAGGGTCATTATTTCATACGGACACAGCATAAGATCGAGTTGCAAGCA ATAATGGAAGCAAGTGGAGGCGGTGATGTGCAAGTGAGCGGTGGTGCAGGGGAGCGCAGGATGAAGATGAAGGTGATGGT GGCTATTGATGAAAGTGAATTGAGTTTCCATGCTCTTAAGTGGGCTCTTGACAACGTCTTAAACACCATGGCAACTACTG CAACACCAGATGAGAATATTGAAGGCGGCGGTGGCGGCGGCATGGTGTTTCTGGTTCACATTGAGCCCGTTTTCCACCAC GCTGTGTATCCCATTGGATCTGCCGGAGCTGGTTTGTACATATCCTTCTTTCTTCTTGTGATATATGGTTCTATTTACAA AATGGGGATAGAAGATCTTTACCCCTTATTATAGCTATATTTTTTATTTCTAAATATTGTCTCAATCTTCATAATTAATA CTATGAGTTAACATCACTTTATCTTAGAGTATATCCAATACTAATTCTTAGGAGTGAGTTCTTATGCACTATTTGTAGTG GCTCGGACTCCCACATATGTTTAAGTAATTCTTAAGTATTTTTTACATATTTCGCACCAATCACACGTTATTTACTTTGA GTTTTCTTAGCACTAAAATTATTTTTTTTATGTTAAGAATTCATAAAGCAAGGTTGTTTATATAAGAACTAGTTTTTTTT TTAAGAATTAATAACTCTACATCAACCATTTTCAATGCTTAAGAATTTGATCTAAGTTCTTAACTTAAGAATTCACCTCT AAGAACTAGTATTTGAGATGTTTTTCGCTGCTCACTAATGACATTAGTAATATTTAAACATTTAAAAAATTCCGCTTATG GCATGGGTCAATAATGAGTCACTCAAGTCCATAGTGATTTTACAACGTCATCAAAATATATCCTTCTTTCTTCTTATGAT ACGGTGCTATGTAGTATGTACCTACATCTTGTGTCCCTGTTTCATGGTTTTTCTATGTCTCATCAATAGAATTATGTTAC CTCAACTTAAAATTACTCATATGATTATTATTATCATGTTCCGTGAATATAAACATAAATTAAAAAAAATCAAACTTATA ATAATTTTTCACTATGCAAAGCAAGCGGGTTTGCTATCGTAACCAAGAACTTGTCCTTGTCCAATAACCAAGGCGGGACA TGGTAAGGAGCAAGGAGCAGAGAGAATAAGGGGCTTCATAACCTTACCTTATTATTTAAGGAAACAACAAGTAATTGAGA AATTTATATGGATGCAAAAGCAAGTAAAATAATTTAATCTTTATTTTTTGTGTATGAATATAAGTGTGAATTGGTAAAAC TAGTTTAGTTTATGTATCATGTATGAGCCTTATTTCACCACTCCCAAAAATATTCTTCAAGTCCGCCGCTCTGATTACTC TGTTCCATTTTCACTCCCTGTTGAGTGTGATGAATGGAACCTTTCCTTTGTATAGTATGTATATTTTCAATGTGGTTATT AGAATGTAAAGCTTATGCGCTTTCTACTAAATAAATGTGACCTCTAATATGCCCCCTTCAACAGTTTACTATCCTCCGTC TGTGGTGGAGGGCTCCGTGAAGAAGGCCCAACAAGAAAAATCTGTATCTATTGTTTCACGGGCATTGCATATGTGCAAGG ATAAGCAGGTAAATTCCTTATGCACTTCTTCTATATCATATCCACCTTATCAAGAAAGTAGTTATAAAAAACAGCACTTG TCAATTTACACTAAAGTCGGATATTATATGCTAGCAATTTGTGACAGTTTTTAAAATTATAAATTGCATTTATAAACTTT GCAAAGTATTGCAGTTTGATATGGTGCTCGTTACTATTTTAGTGTACACATCATTTCATTTATAAAAAAGTTAGCAAAAC ATTTTTTATAGAACAATCTTTCATTGATTGGTTGTTTCATGTTAGGTCTAAGAAAAATATATATATAAGTCATACTTTCA ATTTAATAATACGCAAATAAATTTTAATTAATTAATGACAGAGTCTTGAAAAACAGTACGTGTGTTAAAGTAAGTGTTTG CCAGCAATCGTAATCAAAATCTTGTACCTTATCCATCAAATTCATCCAATGAGAACATGCTATGAAAACGCAGATAAAAG CACAAAGTGTAATTCTTAATGGAGACCCAAGGGAAATGATTTGTCAGGCCGTAGAGCAAATGCAAGTTGATCTTTTAATC ATGGGTAGCCGAGGCCTTGGCAAGATCAAAAGGTTTGTGTTGGTTTTAAGACGATTCTAGCCCAATATTCTACTCTTCGT TTATATATTTAGTGTTTTGCAATTTTTATACTTTTATTGTAATCTTCAATATTATTGATATCATTTTGATTTCAATTTAA CCTGGATGATTCTTAACCTAATAATACATTTGGTGTGTAACAGGACATTTCTTGGTAGTGTGAGTGACTATTGTGCACAT CATGCAAAAGCACCGATCCTCATTGTGAAACCACAAGAGGAGGACCATAAAAAGAAGTAACCAAATCAGCGTTTATGTTT AAGCTAGCACGCCTTGTGATGGATGAATTAAGTATTTTCATGTTGTTTTCTATAGGTTGATGGTTTATATAATTTGTAAC TAATAACGCATGTATCGAGAGAAATAAACTTTTGTCTTTCTAGCTCTACTCTAAATAAAAAAAGAATTTCAACAATCAAC ACACAGCTGATTCTTCGTTTAGGTGGTTCCTCATTCCTCAATGAAGGAATTTTGATCTTCAATATGGGCTATTAATATGG AAAATGTTTGGTCTATAGGACACACCTAGCTAGCTAGTGTGATGACAAGAGAAATAATAGTAATGATATATATGATCTTA TCTCTTAAGAAAAAAAGATAGAGATAAGAATAGGGTGTATATAAATGTATGTACTCTTTTAATGTTTATGATTGAACTCT TTAAAACACTTTAAAAAAGCTTTAGTTTTACTTTATTATCTCAATT
CDS sequence (LotjaGi5g1v0111800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAGTGATAATGGAAGCTATAAAAGCTACGCTGATCAGGGTCATTATTTCATACGGACACAGCATAAGATCGAGTT GCAAGCAATAATGGAAGCAAGTGGAGGCGGTGATGTGCAAGTGAGCGGTGGTGCAGGGGAGCGCAGGATGAAGATGAAGG TGATGGTGGCTATTGATGAAAGTGAATTGAGTTTCCATGCTCTTAAGTGGGCTCTTGACAACGTCTTAAACACCATGGCA ACTACTGCAACACCAGATGAGAATATTGAAGGCGGCGGTGGCGGCGGCATGGTGTTTCTGGTTCACATTGAGCCCGTTTT CCACCACGCTGTGTATCCCATTGGATCTGCCGGAGCTGTTTACTATCCTCCGTCTGTGGTGGAGGGCTCCGTGAAGAAGG CCCAACAAGAAAAATCTGTATCTATTGTTTCACGGGCATTGCATATGTGCAAGGATAAGCAGATAAAAGCACAAAGTGTA ATTCTTAATGGAGACCCAAGGGAAATGATTTGTCAGGCCGTAGAGCAAATGCAAGTTGATCTTTTAATCATGGGTAGCCG AGGCCTTGGCAAGATCAAAAGGACATTTCTTGGTAGTGTGAGTGACTATTGTGCACATCATGCAAAAGCACCGATCCTCA TTGTGAAACCACAAGAGGAGGACCATAAAAAGAAGTAA
Protein sequence (LotjaGi5g1v0111800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSDNGSYKSYADQGHYFIRTQHKIELQAIMEASGGGDVQVSGGAGERRMKMKVMVAIDESELSFHALKWALDNVLNTMA TTATPDENIEGGGGGGMVFLVHIEPVFHHAVYPIGSAGAVYYPPSVVEGSVKKAQQEKSVSIVSRALHMCKDKQIKAQSV ILNGDPREMICQAVEQMQVDLLIMGSRGLGKIKRTFLGSVSDYCAHHAKAPILIVKPQEEDHKKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 43 | 223 | 181 | 1.5E-78 | – | |
| PANTHER | 43 | 223 | 181 | 1.5E-78 | – | |
| Gene3D | 48 | 225 | 178 | 1.3E-41 | ||
| PRINTS | 51 | 69 | 19 | 9.6E-16 | ||
| SUPERFAMILY | 52 | 220 | 169 | 2.57E-30 | – | |
| CDD | 53 | 215 | 163 | 1.73517E-29 | – | |
| Pfam | 120 | 216 | 97 | 6.8E-22 | ||
| PRINTS | 176 | 188 | 13 | 9.6E-16 | ||
| PRINTS | 194 | 216 | 23 | 9.6E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0111800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…