Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0111900 |
| Transcript ID | LotjaGi5g1v0111900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Universal stress protein family protein; TAIR: AT3G11930.4 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:22169052..22172296) extracted from Lotus japonicus Gifu genome v1.2.
GGAAGCTATAAAAGCTACGTTGAGGATCATTATTTCACAAGATCGAGTTGCAAGCAATAATGGAAGCAAGTGGAGGCGGT GATATGCCGGTGAGTGTCGGTGCAGGGGAGCGGAGGATGAAGATGAAGGTGATGGTGGCGGTTGATGAAAGTGATTGCAG CTTCCATGCTCTTAAGTGGGCCCTTGACAACGTCTTAAACAACATGACCACTACTGCAACACCAGATGAAAATATTGAAG ATGGCGGCGGCATGGTGTTCTTGGTTCATGTTGAGCCCGCTTTCCACCCTGCTGTGTATCCGATTGGAACCTCGGGTAAG GGTTTGTATATATATATTCTTCTTTAATTTGTTCTTGTGATATGGTGCAAACTAATGATATCTATTTCAGCTTTATCATC TTAATATATTGCATATTTCAAAAAAAGAAAAAAAATCTTAATATATTGCAAGCTTTCCTTCAAAAAAAAAAAAACTAATG ATATCTATATGCATGTAGACTAAAATAATGACACATTTCAGTGACGAATTTTATTTTATTAATAGATTTTTAACCATGAA AATTTTCCACCAAAATTCATAATTAATACATGCAAAATTGAACAAGTATTTGAAATATCAACGGATTTTAGAGACGAAAA TATAATCATTCACTAAAACAGACAAAAAGAAATTAATTAAAATTTTTGTGATGGAATCTGTTGATAATTTATCTCTATTA CTTAATTTTATGACGGGTTTTAATATTACGTTTCAAAAAAAAAAATTGAAAGTTATTACGTTTCAAAAATTGAAAGAGGT AAAGTGGAGTGTGCATTTTGGATAGGAATGTGGTAAAATTTCATTTTAATAAATCTTGAGTGAAGTGTATTTTACTTTTT TTTCATAAATATTTTCTTTTCTTTTTCGATTATTATATTTTACTTTTTTTAAATACTTTCTTTTCTTTTTCAATAACTAT ATCATTACCAATAAAGTGTCCGAATATCCGAGTGGAAACGGCTCACATATTTTAAACATATTTTAAAATCCACTATTATT AGAACTGAGTCCCCACTTCATGGGGAGCTCATGTCTAATAAAAAAACAATGTTATGAGTCTCACTTTGGTGGGGATTACT GTCTCTCACACATATTTAGTGGGAGGTCTATGAGAAATAAGAAAATCACTGTATTTTTAAGTGAAACTAAATAACTATAT CTTAGTATAATCACAAAAGTTGGAATCTTAACCATACTTAAGAGATATTGAACTTTAACACTAACAACATATATTTACTA GATAATAATAATTAATAAATATAAAAAAATTAAAAAGCATTATTAGCATTTTCGTTATGTTCTCCCTTTTGAGCTGGAGA AGAACCAAAACCACAATAATTCCTTTTGTAAGTTCGAATTAATTAATTACATGTGAAGCTAACTCATGTAATTGACCTAT GTAGTTATTTAATTTACTTAACTATATTATTATTTCCCAACATTTTAGCGCTCTTTTTTGAAACATAAGAATGATTAGGG GACAACTCTACAGTATAATCCATGACAGCTATATATACCACAAGAAAACATCTTTAATCAAGCTTTGTTTGCCAATAATT TACACTGTAGCGTGATTTGTGCATCATTATTACAAAACTAATGTGACCTCTATATGCCCCATTATTCAACAGCTTTGTAT CCTGCGTCTGCATCGTTGGAGGATTTGATGAGGAAGGCCCAAAGAGAAAAATCAACATCCACTCTTTCACGGGCACTGCA AATGTGCAGGGATAACCAGGTAATGTCTTATGCATAGTTTTAAAACTCGGCTCGGACCGACCGGTTGGATCGGGACTCGA TTACCTGATCGGTTCGAGCCTCACATCAGAACACCCGACCGGTTGGATCGGGACTCGATTACCTGATCGGTTCGAGCCTC ACATCAGAACAAGCTTGCAAGCGGCTTGGTGAGAACCAATTTGACTTGTCTAATTCAATGATTAGATCGGTGACTTAGTG TGTTTTTAGTTAAAACCGACAAGTCACCCGCTTCATTTTTTATTTTATTTTTTATTGACAATGGGTCAGCCTAGTTTTTT TTTTTTTTACAATCTAAGCGAAATTTGACAAGAGTTTCAGGCTTTGAGCTATTATTTAATCTATTGGGCCTGTTTTTTTA TTTACTTTATTGGGCCTGCTTATCAGGCTTAGGTGAAGCTAAAACCAAAATCATGTAGTAATTATTTTTAAAAAAGTGGT GCTTGATAGATGCTTTTACCGCTGAAGAACCAAATAGTTTAGTTACTAGTGGCGTTTTTATTACTTTTACCTTAACTTCA TATTGCATTTGATTTTTATTATAATTTTTTAATATATACCGAGTCAAGCATTCGAATTAATGACTCACTTGTTCGATGAG TGACTCATTTACTCAGTACCCCCACAAAGTCGATGATCGAGCCGGGTTTTAAGACACTGGTCTTATTAACTTCTTCTACC ATATTATTCAATTATCCATGTTGTCCCAAAAAAAAAAAAGAGTAATGATCATAAATATTAACAATCATAAATATGCACCA TATCCACCAAATTCATGCAATGGAATCATGTAAAAATGCAGATAAAAGCAGAAAGTATCATTCTTACTGGAGATGCAAGG GAAATGATTTGTCAGGCTGCAGATCAGATGCACGTTGATCTTTTAATCATGGGTAGCCGTGGCCTTGGCATGCTCAAAAG GTTAAGATCATTCTAGCCCAATAATTCTACTCTTCATTTATATATTTAGTGTTTTGCAATTTTTACACTTTTATTGTGAT CTTTCTAATGCAATAATGATATCATTTTGATTTCAATTTAACGGTGGATTATTCTAAATCTAATTATACATTTGGTGTGT GTGGCAGGACATTTCTTGGAAGTGTGAGTGACTATTGTGCACATCATGCAAAAACGCCGATACTCATTGTGAAACCACCA GAGGATAAGGAGCACAAAAAGAAGAAGTAACAAAATTAGCAACAAAATCAGCGTATAATATATATGTTTAAGCTAGCACG CCTTTGTAATGGATGAGTGTGGCCGGAAATAAATATTTTCATGTTGCTTTCTATAGGATGATGGTTTTATAATTTGTAAC TAATAATGAATGCATTGAGTGAAAGAAACTTCTGTCTTTCTCTTTATTCTAATAAAAAATAAATTCTAACGACTGAGCCT TCCTCAGAGCTTCAAACTTAATAGAGTGTATGTCTCATTCCGTCC
CDS sequence (LotjaGi5g1v0111900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCAAGTGGAGGCGGTGATATGCCGGTGAGTGTCGGTGCAGGGGAGCGGAGGATGAAGATGAAGGTGATGGTGGC GGTTGATGAAAGTGATTGCAGCTTCCATGCTCTTAAGTGGGCCCTTGACAACGTCTTAAACAACATGACCACTACTGCAA CACCAGATGAAAATATTGAAGATGGCGGCGGCATGGTGTTCTTGGTTCATGTTGAGCCCGCTTTCCACCCTGCTGTGTAT CCGATTGGAACCTCGGCTTTGTATCCTGCGTCTGCATCGTTGGAGGATTTGATGAGGAAGGCCCAAAGAGAAAAATCAAC ATCCACTCTTTCACGGGCACTGCAAATGTGCAGGGATAACCAGATAAAAGCAGAAAGTATCATTCTTACTGGAGATGCAA GGGAAATGATTTGTCAGGCTGCAGATCAGATGCACGTTGATCTTTTAATCATGGGTAGCCGTGGCCTTGGCATGCTCAAA AGGACATTTCTTGGAAGTGTGAGTGACTATTGTGCACATCATGCAAAAACGCCGATACTCATTGTGAAACCACCAGAGGA TAAGGAGCACAAAAAGAAGAAGTAA
Protein sequence (LotjaGi5g1v0111900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEASGGGDMPVSVGAGERRMKMKVMVAVDESDCSFHALKWALDNVLNNMTTTATPDENIEDGGGMVFLVHVEPAFHPAVY PIGTSALYPASASLEDLMRKAQREKSTSTLSRALQMCRDNQIKAESIILTGDAREMICQAADQMHVDLLIMGSRGLGMLK RTFLGSVSDYCAHHAKTPILIVKPPEDKEHKKKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 190 | 176 | 2.1E-75 | – | |
| PANTHER | 15 | 190 | 176 | 2.1E-75 | – | |
| Gene3D | 16 | 194 | 179 | 5.7E-43 | ||
| PRINTS | 21 | 39 | 19 | 1.4E-15 | ||
| SUPERFAMILY | 22 | 190 | 169 | 9.21E-34 | – | |
| Pfam | 22 | 183 | 162 | 5.1E-29 | ||
| CDD | 23 | 182 | 160 | 1.07224E-33 | – | |
| PRINTS | 143 | 155 | 13 | 1.4E-15 | ||
| PRINTS | 161 | 183 | 23 | 1.4E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0111900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…