Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0135100 |
| Transcript ID | LotjaGi5g1v0135100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phospho-N-acetylmuramoyl-pentapeptide-transferase; TAIR: AT2G41490.1 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase; Swiss-Prot: sp|P0CD61|GPT_DICDI UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase; TrEMBL-Plants: tr|I3SCK4|I3SCK4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0135100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:31939866..31944393) extracted from Lotus japonicus Gifu genome v1.2.
ACAACTTCTAAGCCTTGGTCTTTCTACATAAATCAAATAGTTAAGATTTTTTACACAAAAAAAGTGAACATCCCACGTGG CAACCCTTAGATGAGTTGGCAACATCCCATTGGCATTATGACGATTAGTTTTTTTTTTTTTTTTTTCGTTTTTGAAAAGA AATAGTAGAAAACAAAATCAGTGATTCATTCACCAACTGCAAATCTCCACCGAGCAAAACGAACAACAATGGCAGCACGA AAGAGAGCAGTGTCTTCCGGCGACCCTTCTTCCGAAAGCACACAGCGGAAGCAGCCACAAGAACACCCAGATCCTCCAAT CGCACCTCCCAAATGGGGTCTCCTTCTCAAGCTCTCTATCTTCTCCATCCCTTACTTCTATCTCATCTTCTACCATTACT CCATCGACCCACAACTCCGAAGATCCATACTCATCAATGCCGGAATGAGCCTCGCTGGGTTCTTCGTCACTGTCAGAATG ATCCCCGTCGCCTCCAGATACGTTCTCAAGCGAAATCTCTTTGGATATGATATCAACAAGAAGGGTACCTCTCAGGGAAA TGTCAAAGTGTAAGTTTTTCTGTTCATTTTCCTTTTTTCTTAAGTGGGTATGCGTGGGATTTTGATTTCACGATCTGGGT ATTTTTTTTTGTGATAATGCTTCCATTTGATAAATCTCTAAATATGGATATAAAAATTGTAGCCTTATAGATAGTTTTCT TTGATTTCATTCTATACTTTAGTTGTTGAATTGATAATATTTGTACTTCTAAATTTTCCTTTTCATTCATTTTGTCATTG GAATTCTTGAATTTGGCATTTCATTTTAGGTTTTGAGAGGAAATATATGATGACAATGAGGATGTCTCAAGCAAAGTGGT AGTTTTGGGCTTTGGCTAATAATCAACTACTATGCTTGAAACATTTGGCACATAGACATTGAACTGTTTGGGTGTAGTAT AGTGAGAAAAGTGAAGTTAAATTGAAGAGAGTACTAGGAAGACTATTAATGTCAGAAAGTTATGAAAATTGCAGTTAAAA AAGTTCGAGAGAAACAACATGCCATGTAGGAGGAATAATAACATTCACTTTAAATTTTAATTAAAACAAAGATATGTTTT GTGATGTGGTGGAATTCAATTGGATGGCTGGTGTAAAATATGTTTACACTGACGGTGCACATCCCTTTAATTCTATATAT TATGTATGTCCATCATGTGTACACAAGAAGCATTCTGTTCAGCTAAAATAATTTTTTGATACTGAAGTTTTGCCTATGCT ACACTTTTTTATGTGCAGGCCCGAATCATTGGGTATAGTTGTTGGTATTGTCTTCTTGGTTGTGGGGATCTTATTTCAGT ATTTTAACTTCACAGCAGATTCAAATGTAAGTACATGATCTCGTAAGCTACAAGTTTGGTAATCTGACTATTCAGTGAAG CATTGGTATATTAGGAATGATATCAATAGAAGAATGGAGAGTTTACTATATCAACAATTTTGATTTCGCAGTGGCTTGTT GAGTACAATGCGGCATTAGCATGTGTCTGTTTCATGACATTGCTTGGATTTGTCGATGATGTCCTCGATGTACCCTGGAG AGTGTGAGTATATAAGTTTTCATGTTTTGCTTCTGCAGTTGTGCATGTTTGTCACTAATGCTAGAATAGTTTCTATTTTG CTTATATGTCTATTTGAAGAACAGAAAATTACTACTCCCTTCAATTGCTGCACTTCCTTTGTTAATGGCATATGCTGGAC ACACAACTATAGTTATACCAAAGCCACTTGTCCAACACATCGGGATTGAGATTTTGGATCTCGGTTAGCTTTCCACACCT TTATATTCAAATTACACTTAAGTGATCTAATTGCTCTAAAGATTCAAAATTTTCGCTATAACTTTTCGATGGGGCAGGAT GGATATATAAACTATATATGGGGCTATTGGCTGTTTTCTGCACAAATTCCATCAATATACATGCTGGATTAAATGGCCTT GAAGTTGGGCAGACAGTGGTTATCTCATCAGCTGTAAGTATCAGAGCTTGTAAAGGATAGATACTGTGGGTGTAGAAAAT GATAGATACTGTGGGTTTGCAGATTCTGATGCACAATATTATGCAAATTGGAGCATCAAAAGATCCTGAGTATAAGCAAG CTCATGCATTCTCCATTTACTTAGTTCAGCCCTTGCTAGCTACCTCTTTGGCTTTGTTTTCTTTCAACTGGTACTTAATA TTAGATCTTTATCTTTATGTTTGAGACCTTATTTTCACATGATTGATAGTAGCTTACGAACAATCTGACTATTTTCTTAT TCTAGGTATCCTTCTTCTGTTTTTGTTGGTGATACCTATACATACTTTGCTGGGATGACTATGGCTGTGGCTGGTATTTT AGGCCATTTTAGGTATATCCTTACTTCATCTGACAGAACTGTTAATTTGTCTATCCACTTGTGTTTTTTCAGTGCTTCGA TATAGATTCACTAAATTTCACACCGCCAATCTTGCTTTCTGTTCTAAAAAGGATTAGTCGTGAAGACAAATATGGTCAAT CTTCATTTTTATAATTTGAAACCTATTTATGTTTCCTTCTTATGGTATCACTTGAATCTTTCCATTTTTCTTCATTTTTG GAGTACTTTCATGAATGATTTTCAGTACATTTTATAAGAAAACCTACCGTCTTTCACTCTATATAACAAATAAGCTACCT AAAGTGTCAACAAATGGACCATGTGATTTTCATCTCAATCATATTGGACAAAATAATGAAGAACTTGTAATAGTGACCTT CCAAGTCTCTTATGTTCTAAAACCTAACTTCTACCCCATATAATAGCAGAAGGTTGTTGGAGGTGAGGGTTTTCCATTCA AATGTGAAAGGTTTATTCCTTTCTGTCCTCAGTAAGTAACTATTTCATTTGTCCCTGAGGATTCTCCTGTCCATTCGACC TTTTTCCTCCTTCCATAGAATATTCATAAACTTAGTTCTTTAAGTAAAATAAAAGCAGAAAAAATTGAATAATCTGGCTT TCTGAGCTTTGTTATATTTGCAATGTAAGCCTTTAGCAGATGATGACCTGATTGGACCTGGACAAGAGAGAAACAATAGT TTAGTGCTAATGCTTTGTTTTGGTTTAGGAGAGAAAGAGAGAAGAGAGAAGATTAGTAGAGACAAAGAGATGGCAAATAG AGTAGATCTTGTAAGTTGTTTGGTATGACAGAAGGAGATGAGAAAGAGAGCAGAAAAAATGATGTGGACATTTTTGGCTG AAATGACATTTTTACCTTAAATATATAATCATTTATAAATAAGTATGATAATGATAGAGGAGTAAATTGGGAAACTAGGT AAAAATGGCACTCTCTCCCCCCTTTCTCTTCAAATTGGTGAGACCACAAAAAGTTTGTGGATCCCACATATTTTTATCTC TTTCCTCTCTCACTTTCCCCTACCACTGTCCACTCCAACTCTCTCCTCTCAAACTCATCTCTATCAAACATAGTGTAAAT GTTAGTGCATTTGTATGAACCATTGCACTGTCAGTTTTATGAACTAGCATTACTGTGATTATTAACTGCCTTGTAATAAT TTTGCTCTTCTATCCTTGCTTCAGTGAAACACTCTTGATTTTCTTCCTACCTCAAGTTTTGAACTTCCTCTTGTCACTTC CCCAGGTATGATACTAAGAATCTAACCATTTACGTTTACAATTAGAAATTTTGTCAAAGTAAAACTGTTAAAGAATTTTT TGTATGTTTTCCTCCAGCTTTCTGGCTACATTCCATGTCCACGTCATCGTCTGCCGAGGTAGGCTTTTGCATAAATGTAT CCTAGTGATTGTTCCGGGCATCTTTGCACGTCCTTGTTTGGTTGAAACCTCATGTATCATCTACTCATCCAGGTTTGACC CTCAAACTGGACTACTGACTGGGACAAATGATGGGACACTCGTTAACTTCTTCTTAAGAACTTTAGGCCGGAAGTCTGAA AAGGCGCTTTGTGTTTATCTTCTTGTTTTCCAGGTTTCCCCCCCTTGCCTGCATCTTTTTTTTTCCATTTTTGTTTATGC TTCCCATGTTAAACTTGTATTTTCTTTCTTTGGACAGGCTTTGGCATGCTGTTTCTGTTTCTTTCTGAGGTATCTGCTTG CCGGTTGGTACAAATGAAAGCATGAAGCTGATAAAACTAAGATACCGTAGGAGAGGTTGAATTTGTTGTATAACATTTTT GTAGAAACAGTTTCTAGTGTCAGTGGATATCATATAGGTTTTGGTGGGTGTAATTTTCTTTTCTGTTATTTGAATGAATG ATAAATATCAACTAACAGAAATGAATACAAGTTAAATTTACCTGGAGACTTTGAATAACTAACATATTATGTCATTGCTT GACAAGATGATGATCATTAATTTTTACGCAAAATTTTTGTCCTCTGGTTGTTCTAATCAGTCAAATATTTTTTGAACTTC TAATCAATCAAATATGGTCCTTCCATTCCATTAACATTCCATCCAAAT
CDS sequence (LotjaGi5g1v0135100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCACGAAAGAGAGCAGTGTCTTCCGGCGACCCTTCTTCCGAAAGCACACAGCGGAAGCAGCCACAAGAACACCC AGATCCTCCAATCGCACCTCCCAAATGGGGTCTCCTTCTCAAGCTCTCTATCTTCTCCATCCCTTACTTCTATCTCATCT TCTACCATTACTCCATCGACCCACAACTCCGAAGATCCATACTCATCAATGCCGGAATGAGCCTCGCTGGGTTCTTCGTC ACTGTCAGAATGATCCCCGTCGCCTCCAGATACGTTCTCAAGCGAAATCTCTTTGGATATGATATCAACAAGAAGGGTAC CTCTCAGGGAAATGTCAAAGTGCCCGAATCATTGGGTATAGTTGTTGGTATTGTCTTCTTGGTTGTGGGGATCTTATTTC AGTATTTTAACTTCACAGCAGATTCAAATTGGCTTGTTGAGTACAATGCGGCATTAGCATGTGTCTGTTTCATGACATTG CTTGGATTTGTCGATGATGTCCTCGATGTACCCTGGAGAGTAAAATTACTACTCCCTTCAATTGCTGCACTTCCTTTGTT AATGGCATATGCTGGACACACAACTATAGTTATACCAAAGCCACTTGTCCAACACATCGGGATTGAGATTTTGGATCTCG GATGGATATATAAACTATATATGGGGCTATTGGCTGTTTTCTGCACAAATTCCATCAATATACATGCTGGATTAAATGGC CTTGAAGTTGGGCAGACAGTGGTTATCTCATCAGCTATTCTGATGCACAATATTATGCAAATTGGAGCATCAAAAGATCC TGAGTATAAGCAAGCTCATGCATTCTCCATTTACTTAGTTCAGCCCTTGCTAGCTACCTCTTTGGCTTTGTTTTCTTTCA ACTGGTATCCTTCTTCTGTTTTTGTTGGTGATACCTATACATACTTTGCTGGGATGACTATGGCTGTGGCTGGTATTTTA GGCCATTTTAGTGAAACACTCTTGATTTTCTTCCTACCTCAAGTTTTGAACTTCCTCTTGTCACTTCCCCAGCTTTCTGG CTACATTCCATGTCCACGTCATCGTCTGCCGAGGTTTGACCCTCAAACTGGACTACTGACTGGGACAAATGATGGGACAC TCGTTAACTTCTTCTTAAGAACTTTAGGCCGGAAGTCTGAAAAGGCGCTTTGTGTTTATCTTCTTGTTTTCCAGGCTTTG GCATGCTGTTTCTGTTTCTTTCTGAGGTATCTGCTTGCCGGTTGGTACAAATGA
Protein sequence (LotjaGi5g1v0135100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAARKRAVSSGDPSSESTQRKQPQEHPDPPIAPPKWGLLLKLSIFSIPYFYLIFYHYSIDPQLRRSILINAGMSLAGFFV TVRMIPVASRYVLKRNLFGYDINKKGTSQGNVKVPESLGIVVGIVFLVVGILFQYFNFTADSNWLVEYNAALACVCFMTL LGFVDDVLDVPWRVKLLLPSIAALPLLMAYAGHTTIVIPKPLVQHIGIEILDLGWIYKLYMGLLAVFCTNSINIHAGLNG LEVGQTVVISSAILMHNIMQIGASKDPEYKQAHAFSIYLVQPLLATSLALFSFNWYPSSVFVGDTYTYFAGMTMAVAGIL GHFSETLLIFFLPQVLNFLLSLPQLSGYIPCPRHRLPRFDPQTGLLTGTNDGTLVNFFLRTLGRKSEKALCVYLLVFQAL ACCFCFFLRYLLAGWYK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 35 | 35 | - | – | |
| PANTHER | 15 | 417 | 403 | 1.2E-222 | ||
| PANTHER | 15 | 417 | 403 | 1.2E-222 | – | |
| Phobius | 36 | 55 | 20 | - | – | |
| TMHMM | 37 | 59 | 23 | - | – | |
| Phobius | 56 | 66 | 11 | - | – | |
| Phobius | 67 | 85 | 19 | - | – | |
| TMHMM | 74 | 93 | 20 | - | – | |
| CDD | 85 | 368 | 284 | 6.6297E-140 | ||
| Phobius | 86 | 117 | 32 | - | – | |
| TMHMM | 114 | 136 | 23 | - | – | |
| Phobius | 118 | 138 | 21 | - | – | |
| Phobius | 139 | 144 | 6 | - | – | |
| Phobius | 145 | 164 | 20 | - | – | |
| TMHMM | 146 | 164 | 19 | - | – | |
| Pfam | 151 | 321 | 171 | 2.5E-36 | ||
| Phobius | 165 | 175 | 11 | - | – | |
| Phobius | 176 | 198 | 23 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Phobius | 199 | 218 | 20 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 219 | 238 | 20 | - | – | |
| Phobius | 239 | 243 | 5 | - | – | |
| Phobius | 244 | 263 | 20 | - | – | |
| Phobius | 264 | 274 | 11 | - | – | |
| TMHMM | 274 | 296 | 23 | - | – | |
| Phobius | 275 | 296 | 22 | - | – | |
| Phobius | 297 | 307 | 11 | - | – | |
| Phobius | 308 | 332 | 25 | - | – | |
| TMHMM | 311 | 333 | 23 | - | – | |
| Phobius | 333 | 389 | 57 | - | – | |
| TMHMM | 390 | 412 | 23 | - | – | |
| Phobius | 390 | 412 | 23 | - | – | |
| Phobius | 413 | 417 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UMP + N-acetyl-D-glucosaminyl-diphosphodolichol. | ||
| Biological process | Protein N-linked glycosylation | A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan. | ||
| Biological process | Dolichol-linked oligosaccharide biosynthetic process | The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P. | ||
| Molecular function | Phospho-N-acetylmuramoyl-pentapeptide-transferase activity | Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine + undecaprenyl phosphate = UMP + N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine-diphosphoundecaprenol. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0135100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…