Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0140300 |
| Transcript ID | LotjaGi5g1v0140300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT5G06750.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43; TrEMBL-Plants: tr|A0A151QV00|A0A151QV00_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0140300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:34636758..34644483) extracted from Lotus japonicus Gifu genome v1.2.
GTACTTGTGAGTTTCCTCAATTACAAATCAAGAAAAGTGGTTACGCTATTGTTTCTCTTTCTCCTTCTCCTTCTCCTTCT TCTTCTCCTCCTTCTTCCTTCCAAAGTCAACTCAAACTCACTTCAACTTTCCTCTTCTTACCACTTCCCTCTCAGCATTC GCTTCAATCTCCACTCCCTCTGGGAAACAACGCTGTCTTCTTTTTCTTGCTCCTGCCATTAACAACAACCCCACGATTCC GCAATCTCCACCCAAAATTCACAACAAACAAACACAAATTCACTCTTTTCTTCCTCATCGTGCCCACCAATTTTTTCCTT CAAAGTTACAATCTTTTCACTAGAAATCGAGTCTTTCCTCAACCAATTTCAGTTTTCCCCATCTGGGTATCCTTGTTTCG TTCTCATCAATTCAGAAAACCGCAGATTTCATCGCTTTGAGGCACCGGAGTTTGCGTGTTTTCTCTCTTGCCTCTGTGAG AGAGGGAAATGTGGGATGTTTTCGTGGTTGGCAAGGGCATTTTCTGCGTGCTTGAGACCTGTAAGGCAATATGCACGCAT GAGCAAGGATGATAATGATGATGGTTCCGATAGTCCATCAACGGTGGATGACGCGCTTGTTTGGTTCAGGGACCTTGAGA AGCACTCGGGTGGTGAATTCTCCTTCGCGGTGGTTCAGGCTAACGAAGTTCTTGAAGATCATAGCCAGGTTGAGACTGGT TCTGATGGTGTCTTTGTCGGTGTCTACGATGGCCATGGCGGTCCTGAAGCTTCTCGGTTCATAAATGATCACCTTTTTCG TCATCTCATGAGTGAGTCTTGTTTTGGATGTTTCTCGAATTCTATCTGCTTTCTTTTTCTGTCAAACTTCAAATTCGTTG TTTGTTTGTGTTTGAGCAAATTTTTGCAAGAATTGATTTGGATGAATTTGATTTTGATTATAATTGAGTTTGGGATGAAG TAATTTATGTTTTGAGAATCTTGGTTTTCTTTAATTCAGTATACAAATTTGCAACTTAAAAGTATAAATTATAGTTTATA AGAGCAATTGAAAGGTAAAATCAATTTTGATACATAATAGACAAAATCACTTTTGAGGGATTCTACCATTTCTCTGAAGA TGGTATTGGTTATTGAGGATGTAAAAATTTCATCAAGTTCTTTAAGTTCTTAAATATTGATCATATTAGCCTTTTTGTGA TGTCTTTGTTAAATGATAATGATATGAATTTGTTTTGTGGCAGTAGATGGGGCTGATTTGCTTGAGTTTTGATCGATATT GATATTTTGGACCATTTTGGTGTATAAGATTAGCTCTTGTTGTTATCTGGATAACCCTTTAATTTGACTTTTATTGTTTT GGCTGGTCCTATTCTTGGTTTGTTCATGTTGTATGTCTTTGCGGGTGGTGGAAAGTGAGCAAGATTCAATTTGCTTTCAG AAACATAGATAATGCCTGCTAACATTTTTGTCTTACCAGTAGCTCTGAGTTTCTATTTTGAGCAATGATGTTCTTTAAAG AAAACCAATTTTGAATATATGGAAAATATATCTGAAAGAGTTAGAAGCATCTCAATAATCATGTCCTTCATGCTCAATTT ACACATCATGTGTCTTTCTTTTTCTTCTTTTCCTTTTGAGTAGGTGTCAGTGGAAACGGTGTAGGTGGAAAATTTTGAAT GTGAATCACTTTACACATGCTTCGCCAGTGACTATGTTGAAAATTCATTTTCTTTCTGGTCTCTATTTTCACCTTTCCAC GACCACCTAGTAGCATGATGAAGCACACCCTTCTTGTGTCATTTTTTTACATTTGTAATTTGGAGTGCTAGGACTATGGA AATATGATATTTCCCTTTAAGATATTTCAAAAATTGCTACACATAATATGAGATCAAGGATGCATGCAAATAATTGATTC ACCTGCCTATTCTGGATTGATATTGTTGATGACATCCCATACTCTTTATTTTCAGTTTCTCTTGTTTCTGTTTCTTTTCC TTATCTAAATTGTTAGTTACATTTTGTGTAAGTTATCAATCATAAATACTTTAACTGTCTGACCAGGAATGCTATATTTT TATTAACCAAACTTTTATTTTCACCTGATGTTAGTTTTGTGTTGCATAGCCTAAATATTGCATTGGTTTAAAGAAGTTAT GGAAGTTTTTTGATGAGTCTTAATGCAGGGATTGCTCAAGAAAAAGGTTCTATGTCTGAGGATATTATAAAGAATGCTGT TTCTGCTACTGAGGATGGGTTTCTTACTCTTGTCCGGAGGAGTTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCTT GTTGTCTGTTTGGTGTTATCTGGAAAGGGACACTGTATGTTGCCAATCTCGGCGACTCTCGTGCTGTGATCGGTTCCGTC CGTCGATCTAACAAGATTATTGCTGAACAGTTGAACAGAGAGCACAATGCTAGCAAAGAGGAGGTTAGACGAGAACTCAG GGCCCTGCATCCAGAAGATTCAGAAATAGTGGTTATGAAGCAGGGAACATGGCGCATTAAAGGCATCATCCAGGTTTTCT TTCTATTTTCTCTAGGAATAATTTTCTATCAATGTTTTACACTGCCTTTATCTTTTTCTGTGTAATAATATTCTTCCACT TTGTTGATAGTAAATTGCATAATCATAAGATTTAGCAAATTTCCAATATATATAGTATATACATTTAAATGGCATAAATA ACAAAAGAAAAACATTTTCTGGTTCAATGGTATGATTATGCAATTAATCTTATGATTATGCCAGAAAACAATTACAAATG CGATTTTAATCGCCCACGGCACCATTAATTGCAGAATGTTGGGATTAAGTGATTTTAATTGCGCTTTTGACTACTATGCT CACAAGTCACAACTTTCTATACACGCTTAAATTTTTAGGCTTCGTACTTTTTTGTGTATACAAAATCATAAATCACATTT TATTGCTGCATTTGATTTCTGTAAACTTCCTTGCTAGTGGTATGGGCTCATGTAATTAAGTAGACAATTATCAATGAGAT GCCTGCTGTGATTGCTGGGATTGCTCATTGTAACTTAAGTTTTCTTGTCCACCCCACAACTGAGACCAGGTATCCAGATC TATAGGGGATGCATATTTGAAGCGGCCTGAGTTCTCTTTCGATCCTTCTTTCCCACGGTTTCACCTTCCCGATCCTATCC GCCGACCAGTGCTAACTGCAGAACCATCTATATGTTCAAGAGTTTTACAACCTAATGATAAATTCATTATATTTGCATCT GACGGGCTTTGGGATCACTTGACGAATCAAGAAGCCGCCGAAATTGTTCATAACAACCCGCGAACTGTATGCTTTTTCTA CTTGTCCTTACTTTGCTTTTAGATATTGAAAAGTCTTAAGTTTTTCTTATTGTATTATTCTGTTTCATTGTTTGATTGAA ACACTAGGGAATTGCAAGAAGACTTCTTAAGGCGGCTTTGAATGAAGCAGCTAGGAAAGGGAAGAGGACATATAAAGAGC TTCAGAAGGTTAAAAAGGGGATGAGGCGTTGTTTCCATGATGATATCACAGTAATTGTTGTCTTCATTGACCATGAGTTA CTTGGGAAGAGGAATGTTCCAGTTCCTCAGGTTTCCATCAAAGGTTTTATTGACACGGTTGGACCATCACAGTTTAGAAG TTTCCAGGAAATGGAATGAGTACAAGGTTCATTTCTAGAACTATTTTTAGCCACCAAAGTTGATTGCTGCTGCTTTTGAT TATCCAAAAGCTATGAAATTTCAATACTTCATTAGACATTTTTGAGACATCTAATTGTTGTTCACTTTGAACATTTCTTA TCACCTTTGTCAGTGATAATTGAGGGAAGCCATGTTTTTCACTTTACCTGGGGGTTGGGTTCTTCATGGTGTTAGAATTT GTAGTTGGATAATATACAAATACCTTGTTTCTTTGAATAATGTTGATAATCTGAAGCATGATTTTAACTCTTACTACTCA AATATACTTGCTTGCCTCAGCAGCCTCTGAGCATTTTGTTCAAACTGAGCGTTGAAAGGACGCATGGTGCAGCCACATTC CAAACTCCATTTTTTAGTTTGATTAGAAAGAAGGTTAAATTTGAAATTAATTGCCAATGATGTGAGTGTTTTGCTAACTG CTACTTTAATAGTGTGTTTGTATCAGCAGCAGAATTGGTTTTGATTCTCATACAATTGTGTAGGGTAAATGTGAGTTAAA ATGATGTGAATTATATTTGAATACCTTTATGGAAAAAGTATTTTTTTTGAGTAATTTTATGAAATTTAGTTGTACAATCT TAGAATTGATTATGTTTAATGTAAAAGCAATTGTGTTGTGGAAATTCTTGGGCTCATGAAATCAATTCTACTAGTACACC TAAACTTCATTTCAATTGGTTAGAATTGATTTTAACCAAGTAGAACTGATTTTGCTTTCCAAACATGCTAATAATCATCC TTGAACCAAAAAAAATGTGGGTTTTAATGGACTAGGTAAACTTTTTTCGGGTGGTTGGGTTTTTGGGCCTTCTTGTAATT CTTAAGTCTTTTTAATGGTTAATTTTGTAGACCTCTAATTTTAAATTTTTTGTATTTAAGTTAGTATGGACCTTTATAAC TTGAATGGGCCGTTAAAAATTTTAATTTGAATTGTCATAGCTTTGGTAGACTTGCATTAATAAATGTACTCAAAGCAAAC ATGAAGCGAGAAAAAACCAAAAGGTCCATGCCTAGTAAATTTTGTTTGTGATGCTTGTGAAATTCCATGCCTAGTAATTT TAAATGAAAAGAACATGTAAAGTTCAAATACACAGCTTTTTACAACGAAGTCATAATGAAAAGGAAAAATTAATCTTACA TATCTTGCTTTGCTTTTGATTCTCTCAAGTTTTATCCCAACATATAAATAAAGGAAAACAAAAACATGATCAAAACAATG GTAAAGAATAGGAAGTAATTTGTTCTGAACCACAGGGTATTGCTGTGTAGTACAAAGGAAAGTTATAATTTTCTAGACTC GATCTGCTGCATTTTAGAAACATTTCCTGTGAACGATTGATGGGCCTGATTCATCATATTCCGCTTTTGCAATCCACATC TGCACTCATCAAATGAAACATGAAAAAGTAAGCATTATGTTTACAAAGCCCAACAGTTTCATTCACATGTAATTGAAATC ATGGACTGTACCTGTTGGAAGGTGCTGAGGGATGCTAAAATGGAGCCTCCAATCCACACACTATACTTCCTCTCCGGCGG CGCCACCACCTTAATTTTCATGCTACTTGGTGCCAATGCTGTAATCTCCTTGCTCATTCTATCCGCAATCCCTGGGAACA TTGTGGAACCACCACTCAACACAATGTTTCCATAAAGATCCTTCCTGATGTCAACATCACACTTCATGATGGAGTTGTAT GTGGTTTCATGTATGCCAGGAGCTTCCATCCCGATCGTGGATGGTTGGAAGAGAACTTCTGGGCAACGGAATCTCTCGGC GCCTATGGTGATCACCTGTCCATCAGGTAGCTCAAAACTCTTCTCAACAGATGAGCTGGTGTTGGAAGTTTCTATCTCTT GTTCATAGTCAAGAGCAATGTAGGCCAGTTTTTCCTTCATATCTCTTACAATTTCACGCTCAGCGGTAGTAGTAAAAGAG TATCCACGCTCGGTCAAGATTTTCATGAGGTGATCAGTGAGATCACGCCCTGCTAGGTCCAAACGCAAGATTGCATGTGG GAGAGCATAACCTTCATAGATAGGAACTGTGTGGCTTACACCATCTCCAGAGTCAAGAACAATACCTATAACAACATCGC CATGTTGAGAATTCAGGTGTGAATTAAATCCCACGTTATTTAAGAATGAATGAGTGAAGATCGATTTTATAAAAGATGTG ACCCTTAAATCTAAAGGTGTTAGGTAAAAATGTAGTATCGAATTTTCCTAGTCTTTTGTTTTCTTGCACTATGAGCTCAT CTATCTCTCAACAAACCACTTTATACATGCCAAACTTCCTTAGCTTATGTTTGGATAAATGAAATCATGGATAAAAGATT AAGCTTACAATTTTTGGGAAGTTAATAAGATAGTAAGGAGATAGGTGAATAAAAAGGTGAGGGAAGAAATAAAAGGTGCC AGATAAAATGATCTAGAAAGTATATTCTATGACCTTCTATTAATCCTTTCTACCACATTCTAAATAATCCAAGCATTATA GACTAATGCTATGTTATCTCATCATCTCATCTCACTTCATAACATTATTTTGTCAATCCAAAGATATCTTTAAATCACAT TTAACATTCATGAAACACTGCAGTCATGACAAAATTGAACAGAGTATCACATTCTCAATTTATACAAAATGTTTGAAACT AAACAAATAAAATTTAATTGTTTGGATATACAATTAATTTGATATGGACATTTTAACCGTATTCATTTGAAAATCATCTT GAAACTCAAGTCTAATGAAATACAAGTGGGGCATGACAATGATAAATATACATGTACCATGAACCTTGCACCAAATTACC TAATTGTAAGAATGATTAGCAAATATCACAACCATAATGTGACAATTAAGAATAGGGAAGCAGAATTGAAGAGTTGTTAC CAGTTGTACGACCACTAGCATAAAGGGAAAGCACAGCCTGAATGGCAACGTACATAGCTGGAGTGTTGAAGGTTTCAAAC ATGATCTGGGTCATTTTTTCGCGGTTGGCCTTCGGGTTCAGCGGCGCTTCTGTGAGAAGAACGGGGTGCTCTTCCGGAGC AACACGAAGCTCATTATAGAAAGTGTGATGCCAGATCTTTTCCATATCATCCCAATTGTTAACTATACCATGTTCAATTG GATATTTCAGAGTCAAAATACCCCTCTTTGATTGAGCTTCATCCCCAACATATGCATCCTTTTGTCCCATACCAACCATC ACACCGGTGTGGCGGGGACGCCCTACAATGCTAGGGAACACAGCCCTTGGAGCATCATCTCCAGCAAATCCAGCCTGCAA ATTAATAGGACACATATCACTACCATGTACCACATTACCGATTTACAATAGATCATTGGAAAACCAAATCATGTAAGATC AGAAAACAACACCATGTTTTATCCATATATACCTTGACCATTCCAGTTCCATTGTCACAAACAAGAGGTTGAATATCCTC ACCATCTGCCATTTTTTAATGATTACTACACAAAGACACGAAACTTACATTAAAAAAATAAAATGGAAATCAGAATCAGT CTAATTCATAGGTACAATGTAAGATCTGGGGTTATTATGTGCCAGGCCAATTATATTTGTGTTATCTTCTTTCTTTAATA ATATGGGGAATGAAATTAACCAAAAGATCATGATCATACAAACAAGATGCAACATTTTCAATATGATCTAAGTCTCACAT GAAGAGATTAAGCTAAATATTAAGAGTGAAAATTCTTACGAAGAATAAAAATATGGGTAGAAAAATGAAAATCTGGGTCA CCAAAATTGAAAATTCTCACTGTGAAAGATTTGATGATCGATGAAATATGTGAAAGAAAGAAGAAAGTGGAGAATGTGTC TGAGTACCTTAGAATTCCTGAAAGAACGTGCATGTGACTTATGTGTTTTCTATTTTTATTTTTTAACGAACGTGGCTTGT GTGGCTGAGGTTCTAGTACTGTTGTTTAGAAAAGGGAAAGTTGTGG
CDS sequence (LotjaGi5g1v0140300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTCGTGGTTGGCAAGGGCATTTTCTGCGTGCTTGAGACCTGTAAGGCAATATGCACGCATGAGCAAGGATGATAA TGATGATGGTTCCGATAGTCCATCAACGGTGGATGACGCGCTTGTTTGGTTCAGGGACCTTGAGAAGCACTCGGGTGGTG AATTCTCCTTCGCGGTGGTTCAGGCTAACGAAGTTCTTGAAGATCATAGCCAGGTTGAGACTGGTTCTGATGGTGTCTTT GTCGGTGTCTACGATGGCCATGGCGGTCCTGAAGCTTCTCGGTTCATAAATGATCACCTTTTTCGTCATCTCATGAGGAT TGCTCAAGAAAAAGGTTCTATGTCTGAGGATATTATAAAGAATGCTGTTTCTGCTACTGAGGATGGGTTTCTTACTCTTG TCCGGAGGAGTTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCTTGTTGTCTGTTTGGTGTTATCTGGAAAGGGACA CTGTATGTTGCCAATCTCGGCGACTCTCGTGCTGTGATCGGTTCCGTCCGTCGATCTAACAAGATTATTGCTGAACAGTT GAACAGAGAGCACAATGCTAGCAAAGAGGAGGTTAGACGAGAACTCAGGGCCCTGCATCCAGAAGATTCAGAAATAGTGG TTATGAAGCAGGGAACATGGCGCATTAAAGGCATCATCCAGGTATCCAGATCTATAGGGGATGCATATTTGAAGCGGCCT GAGTTCTCTTTCGATCCTTCTTTCCCACGGTTTCACCTTCCCGATCCTATCCGCCGACCAGTGCTAACTGCAGAACCATC TATATGTTCAAGAGTTTTACAACCTAATGATAAATTCATTATATTTGCATCTGACGGGCTTTGGGATCACTTGACGAATC AAGAAGCCGCCGAAATTGTTCATAACAACCCGCGAACTGGAATTGCAAGAAGACTTCTTAAGGCGGCTTTGAATGAAGCA GCTAGGAAAGGGAAGAGGACATATAAAGAGCTTCAGAAGGTTAAAAAGGGGATGAGGCGTTGTTTCCATGATGATATCAC AGTAATTGTTGTCTTCATTGACCATGAGTTACTTGGGAAGAGGAATGTTCCAGTTCCTCAGGTTTCCATCAAAGGTTTTA TTGACACGGTTGGACCATCACAGTTTAGAAGTTTCCAGGAAATGGAATGA
Protein sequence (LotjaGi5g1v0140300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFSWLARAFSACLRPVRQYARMSKDDNDDGSDSPSTVDDALVWFRDLEKHSGGEFSFAVVQANEVLEDHSQVETGSDGVF VGVYDGHGGPEASRFINDHLFRHLMRIAQEKGSMSEDIIKNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLFGVIWKGT LYVANLGDSRAVIGSVRRSNKIIAEQLNREHNASKEEVRRELRALHPEDSEIVVMKQGTWRIKGIIQVSRSIGDAYLKRP EFSFDPSFPRFHLPDPIRRPVLTAEPSICSRVLQPNDKFIIFASDGLWDHLTNQEAAEIVHNNPRTGIARRLLKAALNEA ARKGKRTYKELQKVKKGMRRCFHDDITVIVVFIDHELLGKRNVPVPQVSIKGFIDTVGPSQFRSFQEME
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 380 | 367 | 7.0E-184 | – | |
| PANTHER | 14 | 380 | 367 | 7.0E-184 | ||
| Gene3D | 44 | 362 | 319 | 4.5E-80 | ||
| SMART | 48 | 351 | 304 | 2.5E-68 | ||
| ProSiteProfiles | 54 | 353 | 300 | 40.728 | ||
| CDD | 55 | 353 | 299 | 1.56118E-61 | ||
| SUPERFAMILY | 61 | 354 | 294 | 5.89E-56 | ||
| Pfam | 71 | 321 | 251 | 6.7E-39 | ||
| ProSitePatterns | 80 | 88 | 9 | - | ||
| Coils | 184 | 204 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi5g1v0140300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…