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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0140700 |
| Transcript ID | LotjaGi5g1v0140700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid lipid-associated protein; TAIR: AT2G42130.4 Plastid-lipid associated protein PAP / fibrillin family protein; Swiss-Prot: sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic; TrEMBL-Plants: tr|I3SSW0|I3SSW0_MEDTR Plastid lipid-associated protein; Found in the gene: LotjaGi5g1v0140700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:34674806..34684062) extracted from Lotus japonicus Gifu genome v1.2.
AAAAATAAAATTAGGACATGACATGTGTGCTAGGTTGGAAATAGGACAGGGTTGAAAGTGTGACTGAACCTACTCCATCC AAGTCAGCAACTCTCTCATGCTTAGGAACTTCAGACAAATTGAATTGAATTGAATTGAAAAATAACACTACCATTATCAT TCATTCATTCCCCATTCTTCATTGAAATGATGTCAATGGCTTCTTTCACTTCGACTTCCCATCCTTGCATTTCCGCAATT TCCACCTGCATCCCTTTCTCTTCATCATCTTCATCTTCTTCATGGAAAGTATCAGCCTCACCACGCACCAGGCATGGTGG GTGCTGCAGAGCCATGGTTCAGATTCAGACCGGTGCCCCCGCCGCGTATGCAAAGGAAATGGAGCGCCTTTCCGCCAAAG AATCGCTTCTCCTCGCTGTCAGTTCTCTCTCTCTTTTCCCTTTCACTTTGCATTTTTCCCACTTTCCGCTTCATTTTCGG ATTGTAATATGTGTGGCCCTTGATTTCTTTTGTTTACACGTTTATCTCTTTTGGTAACCGAAATGAAGAAAGGGAAAACG ATTTGGGTGGAGTGTAAATTACTGACACTTTGGAATAGCAACAAATTTTTAGTCTTTTTTTGTAGGATTGAGCGCTCACC ACTTTTTTTAGTGTTTAGATAATGAAATTGAAAGTTCTAAGGAAAAGTTTCTAGGAACCAAACTACTTCAGTTGAATTCC TTTACAGTAGGTATTATGAGTTTTTTTTTTTTTTTTGAATTTTTTAAGGTTTAAAATTCAAGTAAAATAAGTTGATACAT GTCAATTATAGAATTTGTCAAATACTATATGTTTGTGTATATCTTTTTTTGACAAATACTATAAAATTGGGAAAGTTTAC TTAAATAGTAGCTTTGAGAGTGCTGCTATCAAATCTGTGTTATGAAGGATTTTGTGAGAGAGGGGAGCTTGATAAAGAAT TTGTGACATTCCTTATGATATGGTGGAATTTTGAAGTCTTCATTTTGTGTTTAAATTTACCCTGTAAAAATTATCCTGAT ATTTTCCATTTATTTTTTTGGAATGTCAAACAGTGCATTCTGTACTAAGTCATTCAAAATACTAGCAGCAAATACATTTC TCCATTAAAATCCTTTTCAAAAGAATTTTTAAAATATGAGTTTTTGTTTAATTCCTTAGCTTGCTACTATTGCTTTCACT GAGACTTGAATAGCGGGTTATGTCAGGCTAAGGAAGAATGATGAAGTAACAGAAAAAAGTTACAAGTAATTGACTATGAC AGCCAACATTAACTAAAAACACAGATTAAAATCGAGAAGATTATATACCATCTAATAGTTTTTGCAAATAGCCAAGCTTA AACTCAAACATGCTTACTATGGAGACATCCATTCAGTTTAAAGATGCAGGGGGTTTTGAGGCTTTAGTCTCCGGGAAGAC AACTGAATATCAAAAAATTGATGTGAATGAAAGGATAACTGGTCTTGAGCGGCTCAATCCAACACCACGCCCCACTACGT AAGGGACTGATAACATCCCTGTCTCTGCTTCTGTATGAGATGTTCACACGTTTTAATGCTACAGGTCACCCTTTCTGGAA GGTCGATGGAACTTTGAGTGGTTTGGTCCTGGAACGCCTGGGTTGTTTGCAGCTAGGCTTATATTTGAGTGAGTTCTCTC TTTACATACTTGATTTTGTCTTGTCAATCTTCAAAATTCCTCGCGGGACTTCAAATTTCTCGCTTTATGTGCACTGATTT GGATTTGATCTTACCAGTGAGTAACAACACTGCTGTGTGCGTGATATCTTTGCAGGAATTTCCCTTCAAGTTTGGCTAAT TTGTCAAAACTGGATGTCGTTATTAAGGATGGAAATGCGAAGATTACTGCAAACACGAGATATTTAAACTCGGTATATTT TTTGAGTATCTAAGGTTTTTATGCATATATGATATACCAACTTTCCTTTTGCATTCAGGCAGCATTGCGAGATTCTTTTA TAATTTACTTTCAGCTTGAAACTTGAAGCACCCAATTAACACCATATTTAATTTAAGCCTTTAACCGTATCCAATTTTCT TGCATGATGTTAACCAACTCAGCTTTCTCCCCTTCTTCCCCCATGGAGAGCTCAGGTTATGCATTGACTTGTTAATTCTA TTGCATATTGTAATGCCAACAATATCTTTAGCTCACATATTTGATGCAGTGATTAAGCCAGGAATAAACTCGATATTCAT TTAATACCTAGGTAATGTTGTAATTGGACATAAAAATGATTAAATTATTTTAACAGATAAATAGCATACTGTTTCTGCAG AGACATATTTTGATACTGAATAACATTGAGGCAATGACTGTCTTACTGCTTGAAGGAGCTGATGTTAAATACATATTTTA CTTCCGTTAACTAGTTCTTGATACTGCAATCATGGAAAAAAGTAATAAGAACTGGTACCAAGAATAGGATCAGGGAATGA TTATTATTGAAGCAATCCCAAACTGAGCTCTGTCCCAATGTGGTGACAGAACCAGCAGTCTGGAGAATGAATTACAATAA GGACTGAGAGTTTTGGGAGCTTCAATTCTCTCCTCAAGGGTTCCAATCAACGAAACTGAGCATGTTACAATGAGTCCCCT TTCCCTAATTTATTCTCTCTTACCTCGTAGCTAACTCACTAACCCATTCAGTTCAGAGGTTTCTTTAGTGATGGTTACCC CATAACAGTAACTATCAGGGTTGTGGTTCACTCTAACTCTCCTCGTTCTCCTCTCATAGAGTCTCCTACGTTGAGGTCTA TTCCTATGAATACCACCCCCACCCAAAAAAGAAAAGATCCACCTTGTCCTCAAGGTTGAAGGTAGAAAACTCGGCTGGAT TGAATCCCCCATGTCATATACCAACTATCCCAAAAACTTAAAATTGTAGGGTGAAGACGCATGAATGGGTTATACTATAC TTCTAACAACTTGCATTGTCAAGATTAGTTTCTCTCACTTCTCATGTTCTCAAATGTCACTTAATGTGCCCCTATATATA TATATATATATATATATATATATATATACACATACATATATTCATGTGTGTACAAGGATGAATAGCAGAAGAAAGTTGTT GGAGATTTTTCTTATCATTTATTTGATTTTAACTGTTTTTCTAAATGTTTAGTTGACTTGTCGAAACTTATTAATTTTTT TAAGTTTTTGACAAGAGTCGTCTCTTTTAATTGCTAACCACAAGTCTCCAAGAAGATAAAAAACAACTTTTCAATTAGAC ACCTAATGAGAGTGTCTTGCATCTATATTTTTTTTATAAGCTGCATCTATATTACGAGTGTCATATGAGTGTCGATGTTC GAAGTGTGTCTGATTGTATGACACCTCAAGAAGGAGAAGTGTCAATGATTTGTATGACATATAAATCCGCACTCATAATT TTACGACTTCATTAATATAACATTGAAAAGCACTTAGGATTTTTTCTTGTATGTTTAGACAAAAAAAGATGGAAAATGAC CATGATTTTGTTTAATGATGGAGGTTCAGATAGAAAAGTGAGCTGTCTTCTTTTTGCTATGTGTTGAATAGACCTGCACT TTTCGGATTGTCATACTCCACCTTCAACCCAGAAGCTAAAATTATTTTGTCCTTTCTCTTTGGGACATGTTTGAAAAAGT GGCTTTGGGACATGTTTGATAGAGTGACCATCTTGTGTTCAATAGTAGTTAGGTAAAGTTAGTTTAAGAATTCATCCATT TAACTTCTTTAAATTCAAGTTCAATTCATTTCTAATAAGTGATTTTATTATAAGCAACAATAAGGCCTACACAATACATT GCACCTTTTATATGGTGTTTAAAATTGTATTCGTTGATTGTTTTTTAATCATAATTAATACTTTTGTTGTAATCACTATT CTCCTTGTGTTCAAATGTAGATTGAAAGCAAAATTATTCTCTCAACCAAGTTATCTGTGGAGGGGCCACTTAGAATGAAA GAGGAGTATGTTGAAGGGGTTCTTGTCTCACCAACTGTTATTGAAGAAAGAGTACCAGAACAGATTAAAGGTGCACTTGG GCAGGCACTTAATGCTTTACAACAACTTCCTGTCCCTATACGTGACGCTGTTGCTAGTGGGCTGAAAGTTCCTCTGAGTA AGTTGCTACTAATTTTCTATATTCATCTCTGAGCATGTCCTCGGACTTATGTGTTTTGAAAGATATGATGAATCTGTTGA ATTTTGGTTTCACTAAGCACTGCCACTATTATATGCTAAAAAACTGAAGTCTGGAGAAGCAATAGGTTATGAAATGCCTT ATCACGATTAAATCTAAACTTTGAGTTATGTTTCTATTATTCAAGATATTAAAGAATGTGTTATGCCTCTGTTACAATCC AAACTTCCAGTTATGTTTCTAGTATTCAAGATATTAAAGAATGTGTCATGTCGTTATTACAATCCATTTTTCTGCGGCTA TCACTGGGATTTTTAAGTCATGTTAATGTCTTGTAATTGATATTTTTTACCTGTTCTCAATAAATAAAGATATACATGTC TTGTAACTAAAAAGAGAGGTACTTGGGGCTTGGGTTGGCATAAATGGTTAGATATCTGTGAACATTGTTAAATGTCTAGT GTTTGTTGATATATACTGTGATATTGTTTGTGTACTGATTTTACTCACAAAGTATATGTACAGAAAGGTAGGATATGCAA GAAATTATGTAATTGACTAATAATTTTAGTTGTATGGAAAAATTTATGATCAACATGCACTTTTTATGCAAATTTTGTGA TACAAACTACGTTTTATTTTTCTCATATATGAAGGTGGAAGCATCCAAAGACTATTCATGATTTCCTACCTCGACGAGGA GATACTTGTAAGTTTTTAATATACTCAATCAGGATTCAATTTTTGATAAATTTAGTGCTTGTGCTCCCTTATTGATGACA ATGCTGATGAGGCTAACTTGAAATCTCAAATTTTGATGGCTGTATTAAGAAGCATAGATATAGTTCCTAGTATTGCATCT GATACAAAGATGAAATGGGTATATGGTCACTTTTTGGAATTGAACGTCTTATGCATTTGAGTAGGTTTTGGCATAGGAGT TTTGGATATAGTATTACTTGAATTGTCAAATTTGAGTATGCTGACATATTTCCTTATAACTTGCTAAAGGGTACGGCGTA TTCTTAACCTTTGGTCATGCTGGGCTCCTAGGTTTCTAGCAAGTCATATCCTATCACATTAAAAGGAGCACATACTATAT CACCAAAAAAATGCAGTATGATTGTTTGATGCCTCTCCTAGGAGCTCCTGGCATCTTTTGGCAATCCTTGATTGATCCCT GTTGCGGTTACATGCAAAAGGCACTCCGATGCTTAAGTTATTGAAGTATTTTAGGGAGTGAAGTAGGGAGAGGCAGGTAT GCATTACTAGAGCCTTCTATTGGATATAATATTTATATTGGATGTCTTTACTGAACAAACAGATCTCAATTAAGGTGACC AACTGAGCATGAACTGGGGTGACAGATTACTCTGATTCGTTGGCAGATTATCAGCCCCCTAGCTTCCACCTTTATTGTAA AGCGAAGACACTGAATTTGTTCTGTGGATTTTTCAACATGACTGACTGACTTGATACTTTCAGCCTACCATGCTTATTTG TATCCCTTGGCGTTCTTGCCCATGAGTGAGAAAAAACACTGTATGCTCTGCTATCTGACTGACCTTGGATTTGCTTGCTC TTCTGTCAACCCCTTTGTATTCCAGGCTATTTTTCTCATGCCATTTATTTATGACTGTTGATGTTTCCCTAGCATTTTTC TGCCCTCGGATTATAGTTATGTTCTGCCACATGCTGTAGGTGGCCCTCAGATTTCTGGTGTGCCTTCACATTTTACTTTA GCTTAAAACCCTGTAATTACCTCTGGTTCAGAACTCTGAACTCGGATATCATCGTTTCTCTATTTCCTTCACCACTTTCT GTTCTTTAGCACTTTAGTTATTGCCATTCGCCACCATATACTGGTTTCGCTGCTGTCACATGGTTGCTCTGCTGTGATAG GGTTGGTGCCAAGATAGTGAAAATTATGAAGAAACTGGTTGTATTATTGATGAAGAACCCTAATTTCCTTGCCCTATGTA GACAACTTGGGAAAATAGAGCTAAGAGGTACAAAGGTTGTTGACACTTTTGAGAGGCTCAAGTCTCTCCTCTAATGCTCA ATTACAATCTGGATGCCACCCAATGAGTCCCCTTCCTCCCTTTTATACTTCACTAACTCCCTAACTAGCTCACTAATCAT TCATACTTTAGTTTAGTTAGCTATTCTTACAATAAGAACCTCTCACCCCATAATTGTCACTCTCCTGTTCCTATCATGCT GCCACAGTCTAACCAGTTGATCCCTTGTACGGTTTCATTGTCCACCAACAGCCGTAGTTCCTTCTGCATCTTTATTCACT TTTTATTATGTTGCTTTCTTTGAGTTCCTGTGTTTTGGTGTTCTTGTTGCAAGAAAAGATGTCGGGAACAAGGTTGGTGA TTCTCGCAAAGGTGGTGAAGACACCGTTTCTGAGAAGGAAGATAGCTCTTTCTTGGGCCTTGAGGCTCTTCTGATGGAAA GCGGATGGGAAAGTAGTTTGGACTTTGGACCCTTCTTTGGGTCCTTTCGTGAAGCTTCATGTGAAGAAGGGAAAAAAGTG TGCCTCATACTAAGGATTATGGGTTTTCCAATGAGGTGAAAAATACAGGTCGGTCTTTCGTTCCAAATTGAAGGAATCTG TGTTTGACCATGGACACGAAGGATGAAGTATTCTTCTCAAATTCTTGGGAGATCTTCCTAGCCTAGACTGCTTGACCCTA ATTTCGTTGGAGCATGACATGACACTATGTTTTGAGAAGTACATAAGTTTCTAAACCTCAGGTTGGTTTTCTCCATCTGT GCTGATAGCTTTTTAGATTAAGGGAAAGAGACTGAGAATGATCCAGATTAAGCAATGTTCGTCTCCGGGATCCAGTCAGA AATGTGGCAATGATCCGCCTGTTGTGTTTGGTTTTGGTCGATGTACGACAGTGCGTGAGATGCACGTGTAGAAAGATGAG CCTGAGTGGAGGTGCGTAGATCGGATAATGTGCAATCCTGCTGGTGGGTTCGGTGATGGTCGACAGTGGTAGATGCACAC GGTCACTGGTGCTTGGTAGTGGTCAAGGTTGAATGGACAACTTTCCATACTAGAAGCACAATTAAGGTGCTTGACTAAAC AGCGGGTGCAATAAAGAAACTCAGAGCTGACCGCAATGAAGGTGGCTAGGGTTTTGAGGCCGCTAAGAAGGCGGCTGGGG CTTAGACACGAAAGCATAGCCACCCAATATGGCGTGCTCTACTAACAACTTGATAGGGTCTGAATAATAAATAATTTTAT TCAATTGTTAATTACTATAGAACCTCTAATATTTTTAGGTTCATGTACATGATTCCTAATTAATGGAAATAAGAATAAAA GGATTAAAAACCTGTCCTGATTAAGAACTGTTTTGATATTTACTGAAGAAAAGAAAAAGAGAAATATTCATCCTAGCATA GCATTTCCAACTCTTTTCCTCATTTGGATATTTTGAACGATTGATGCAGAGTCAAATGCAACTCAGGCTGTATTCATCCA TGAAGGAAAAGCCTCAATAATCTGTAAAAAATGAAAAGAGATATGATTCAAATGTCCTTTGACTCCTTTCATTTCTATTT TTCATTTTAATTGGTCATTGCGAGTCAAGACCTTGATCTAATGTATAATTTCATTTTCGCATTATAATAAAATCTAATCA TGGATATCACAATGTTTATGCTGGTTTTTATGCAGATAATAAGGGACACAGCTGGAATGCCTGAAGTTTTAACGAGGCTG GATGCATCACCATCTTCCATAGGAGAATCAGGCCCAGATTATGAAAGCTAGGAATTCTATAGATTTTCCTTCTTTTTTAT GATAAGTCAAATTCCCCTTCCTCTCAAGCCCATACACAGCTTCTATTTATTTCTCTCTGAAATCCCTTTTTGGTTCTTCT ATAGGGGGTAGAATGTGAATATAGAGATGTCAACTTGAAGCTGACACCAATTCTTACAAAACCATGCATGCTTAGCTTCA AAACAGTGGTTATCTGATGTAGAAATCGAATAATGCTACTTATACAACCAATAATGAAATATAGAGCAAAAAACCTGCAT GTGTGATCCACAGATATTCTACAAAGATTTACTGGCTTGCATTTTTGTTGGACTTTCATTATTTTTTACTTTTATGGTTG ACACAACAAATTGTTCCACATGACTAACCACTTGATGCTCATTTCTCATCTGGATCAGCTATGAATTGAATCCAAGTAAA AAATAACCAAACCAAAACTGTAGTTGGTGAGCTGGTGTATGAGTATTTTTTTCCCTCAGGGATATGCAAATAAGGACCTT GATATTCAAATTCTTATTTATTTATTTTTGAGCTGTGGCTTTCGAGAATGAGTTGAAAGCTGGAGACTTCAATAGCGACC TTTCTGTAAGGCATGCGCAACCCTTAGATGAGGTACATGTCAGAGCCACGCCATTCATTATTAAGGAAGAAAGCAATACT CTCAAAAGCACACAGGAGCGGGAAGAACTTGGTAGAATAACAACTAATCCCAGAAGCAAGGCGGACAAGGCAGCCGACCA ACCATCTGAAAGATCGTGGTTTTTCGCTCGGCATTTCTAACAACGTCCGAATCAATGTTTGGACGAGGAGAAATGAGTTC GAGCTTACCCTCCTTAACACCCAACGTAGCTAGATATTAAGGGACTTGGTGAAATCGAAGCATGACTTAGTGTGTGAGTT CCACAATAACACTTGCCATCTGACGAAATTGCTGGGGATTGAAGTATCAACTTGAGCAATTAATGTGTACTATCATGAAT TTGGATTGGGCTGATCGTGCCTCCAATTCAGATGAGCAACCCAAGAATCAAGTAAGCCGACCCAGAAGGAAGACCATCAA GCATGAAGTTGTGTCCAAATTCATACCCACTTTATCCCTAAGATTAGTCAAAGGAATAAGTTATTATTCCCCTTGATTTC GTCTCTCATTCATGTAACTTAGTCAACTTAGTAAACCGTCCAAGTTCAATGTATCTATAACTTGGGTTTTGGGGAGTCAC CATCTATATAATAGGGCTCATTGTAGGTTCACTCTTTTTCACTCAATACAAATTCTT
CDS sequence (LotjaGi5g1v0140700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCAATGGCTTCTTTCACTTCGACTTCCCATCCTTGCATTTCCGCAATTTCCACCTGCATCCCTTTCTCTTCATC ATCTTCATCTTCTTCATGGAAAGTATCAGCCTCACCACGCACCAGGCATGGTGGGTGCTGCAGAGCCATGGTTCAGATTC AGACCGGTGCCCCCGCCGCGTATGCAAAGGAAATGGAGCGCCTTTCCGCCAAAGAATCGCTTCTCCTCGCTTTTAAAGAT GCAGGGGGTTTTGAGGCTTTAGTCTCCGGGAAGACAACTGAATATCAAAAAATTGATGTGAATGAAAGGATAACTGGTCT TGAGCGGCTCAATCCAACACCACGCCCCACTACGTCACCCTTTCTGGAAGGTCGATGGAACTTTGAGTGGTTTGGTCCTG GAACGCCTGGGTTGTTTGCAGCTAGGCTTATATTTGAGAATTTCCCTTCAAGTTTGGCTAATTTGTCAAAACTGGATGTC GTTATTAAGGATGGAAATGCGAAGATTACTGCAAACACGAGATATTTAAACTCGATTGAAAGCAAAATTATTCTCTCAAC CAAGTTATCTGTGGAGGGGCCACTTAGAATGAAAGAGGAGTATGTTGAAGGGGTTCTTGTCTCACCAACTGTTATTGAAG AAAGAGTACCAGAACAGATTAAAGGTGCACTTGGGCAGGCACTTAATGCTTTACAACAACTTCCTGTCCCTATACGTGAC GCTGTTGCTAGTGGGCTGAAAGTTCCTCTGAGTGGAAGCATCCAAAGACTATTCATGATTTCCTACCTCGACGAGGAGAT ACTTATAATAAGGGACACAGCTGGAATGCCTGAAGTTTTAACGAGGCTGGATGCATCACCATCTTCCATAGGAGAATCAG GCCCAGATTATGAAAGCTAG
Protein sequence (LotjaGi5g1v0140700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSMASFTSTSHPCISAISTCIPFSSSSSSSSWKVSASPRTRHGGCCRAMVQIQTGAPAAYAKEMERLSAKESLLLAFKD AGGFEALVSGKTTEYQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGPGTPGLFAARLIFENFPSSLANLSKLDV VIKDGNAKITANTRYLNSIESKIILSTKLSVEGPLRMKEEYVEGVLVSPTVIEERVPEQIKGALGQALNALQQLPVPIRD AVASGLKVPLSGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLDASPSSIGESGPDYES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 13 | 13 | - | – | |
| Phobius | 1 | 37 | 37 | - | – | |
| PANTHER | 3 | 293 | 291 | 2.2E-143 | – | |
| PANTHER | 3 | 293 | 291 | 2.2E-143 | ||
| Phobius | 14 | 25 | 12 | - | – | |
| Phobius | 26 | 37 | 12 | - | – | |
| Phobius | 38 | 299 | 262 | - | – | |
| Pfam | 93 | 279 | 187 | 2.2E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0140700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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