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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0143900 |
| Transcript ID | LotjaGi5g1v0143900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT5G06850.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A072TRG9|A0A072TRG9_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi5g1v0143900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:36118663..36121984) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGAATCATGTCATAAGTTTTGGTGGTAAAGGCTTAATTATGGTAAAAAATTAAAATACATAGTCAATAAGAACCGAA CTGATTAGGATCACAAATAATATAGACTTGTAAAAGAGACCCCAAACCAGGGCCTTAAAGGTGACATGCATAAACAAAGT CTCACATCTCTATTTTCAAGAGAGTCCAATTATATTTGTCTTTCCATAATTTCTATTTGTTGCTGTTCCAGGAGTTTGAG CAACAACAGTTAATAAAGGACACTTCTGCTGACTCTCAGTTCTGGTAGTAATTTTTATTTACTTCTCCAGTTTCATTCCT CAAAACACATGAAAGTACAGGTTCTGCAGCAAGAAGCAATTTGAAAGGTGAATTTTTCAAATAAGCCACAATGAGTTCTT CCAAACCTGCTCCAAAGTCAAACCAAGAAGATTACCAGTTGAAAGACACAAAGCCCTCGCTTGGAGAAAGGTGGCCACAT GGAGGACAACGCGGCGGCAGTGGTTGGCTTTACAGTGAAAGGGCTACGAGCACTTATGATCTGGTGGAACAGATGTTCTA CCTCTATGTTCGTGTGGTGAAGGCCAAAGAACTCCCACCAAATCCTGTCACGGGAAGCGTCGACCCTTATGTTGAGGTGA AGGTTGGCAATTACAAGGGAAAAACAAGGCACTTTGAGAAGAAGACCAACCCTGAATGGAAGCAGGTTTTTGCATTCTCA AAGGAAAAGATACAGTCTTCATTTGTTGAAGTATATGTGAAAGACAAAGAGATGGTTGCCAGAGATGACTACATAGGGAA AGTTGACTTTGATATGCATGAAGTTCCAACAAGAGTCCCCCCAGATAGCCCCTTGGCTCCTCAGTGGTACAGGCTTGAGA ATCTGAAGGGAGAAACCAGGAGAAGAGGAGAAATCATGCTGGCTGTTTGGTTGGGAACACAAGCTGATGAAGCATTTCCA GAGGCTTGGCATTCAGATTCTGCTTCAGTTAAAGGGGAAGGACTTTACAGTATCAGATCAAAGGTGTATGTCAATCCAAA GCTCTGGTACCTCAGAGTTAATGTTATTGAAGCACAGGATGTTGAGCCACATGATAAAAGCCAGCCACCCCAAGTGTTTG TAAAGGCTCAAGTTGGACAACAAATGCTAAAGACAAAGTTGTGTCCAACAAAAACAACCAATCCAATGTGGAATGAAGAT CTGGTGTTTGTGGCAGCTGAACCTTTTGAAGAACAGCTGGTGCTAACTCTAGAAAACAAGGCTTCAGCAGCAAAAGATGA AGTTGTGGCCAAATTGACCCTGCCGCTGAACAAATTCGAGGTCCGTATGGATCACCGCGCGGTAGACTCGCGGTGGTATA ACGTTGAGAGATTCGGCTTTGGTGTTTTGGAGGGTGACAAGCGGAATGAAAGAAAATTTTCAAGCAGAATTCACCTCCGG GTCTGTCTTGAAGGTGGTTATCATGTTCTTGATGAATCCACAATGTACATTAGTGACACAAGACCAACTGCAAGACAGCT ATGGAAGCAGCCAATTGGGATTCTTGAAGTGGGAATCTTGAGTGCTCAAGGGCTCCAACCTATGAAGACAAACGATGGAA AAAGCTCCACTGATGCATACTGTGTGGCAAAATATGGACTCAAATGGGTCAGAACTAGAACAATCACAGAAAGCTTCAAC CCGAAATGGAACGAGCAATACACATGGGAAGTGTATGATCCTTGCACTGTCATAACTTTTGGGGTTTTCGACAACTCCCA CTTGGGTTCGACATCTCAACAAACACCTGGTGGTGGAGCTAAAAACGACTCTAGAATTGGCAAGGTGAGAATTCGTTTAT CCACATTGGAAATGGATAGGATTTACACGAACTCATACCCACTACTTGTTCTTCGTCCCACGGGACTAAAGAAAATGGGT GAATTGCAACTAGCAATTCGATTTACATGTCTCTCTTTAGCTCACATTATCTACCTTTATGGACACCCTTTGCTACCCAA AATGCATTACCAGCATCCATTCACTGTGAACCAATTAGACAGCTTAAGATACCAGGCTATGAGCATCGTCGCGGTTCGCC TCGGGAGGGCAGAACCGCCGCTAAGGAAGGAGGTTGTTGAGTACATGCTGGATGTAGATTCTCATATATGGAGTTTGAGA AGGAGCAAAGCCAATTTCTTTAGAATTGTGACATTGTTTTCAGGTCTAATCTCAATGAGCAAGTGGCTTGGTGAGGTGCA GAAATGGAAGAACCCAGTGACCACAATTCTAGTTCATGTTCTATTCTTCATCCTCCTTTGCTATCCGGAATTAATCCTCC CCACGATCTTCCTCTACATGTTTCTCATAGGAATTTGGAATTTCCGGTCACGGCCGCGCCACCCTCCACACATGGACACC AAGCTTTCATGGGCCGAAGCGGCGCACCCAGATGAACTAGATGAGGAGTTTGACACATTTCCAACTTCAAAAGCTCAGGA TGTGACAAAAATGAGATATGATAGGCTTAGAAGTGTGGCTGGGAGGATTCAAACTGTGGTTGGAGATATTGCAACTCAGG GTGAGAGGCTTAATGCTTTGTTGAGTTGGAGAGACCCAAGAGCGACGAGTTTGTTTGTGATTTTCTGTCTTGCTGTCGCG GTTGCCCTGTATGTTACGCCTTTCAAGATTGTTGCTGCTGTTGCTGGAATGTACTGGCTCAGGCATCCTAAGTTCAGGAG CAAGCTACCCTCGGCGCCTGGGAATTTCTTCAAGAGGTTGCCATCTCGTGCTGATAGCATGCTTTGAGGCAGGCACCAAA GGAAGCAGAAGAGAAGATATTATGATCCATGCAGTTCTTGTGTAGTTGTGTTAGTGCAATGTTGATTCTTTACTATTTGG TGGTGGGGAAAGAGTAATCATTTGTTTGTTGTTATCAAATTTCCAATTCATGAGTTTTGTTAGTCATACTTTTCTTCTAA TAACGAGTTTGTGTTAGTGATACTTGTAATAATCGATGAGTTCTTCAGGGTAGTTAATTTATGTAGGTTCAACCCTCTAA ACTACTCAGATAAGAGCGCATTCTGACGAAATGTTGATCAAAAGGTGAGAAATTCTTGAGTCGTTTGTATTATCTTGTAA CTTGTAAGGCTTGCAAAGCATTCTCTTAGAAGGGGGTAGTTTTGGTTTCTTACGTTCATTTAAAAGTTTATTATTAGATA TTGGGAGGCCTATACTCAACAACAAAAGCTAGCTCAAGAGTTGAGGTTTGCACTACCCTTATAAAGACTATCTATGCTCT ATCTCTAGCCAATGTGAGACTTCTAACACACCCCCTCACGTC
CDS sequence (LotjaGi5g1v0143900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCTTCCAAACCTGCTCCAAAGTCAAACCAAGAAGATTACCAGTTGAAAGACACAAAGCCCTCGCTTGGAGAAAG GTGGCCACATGGAGGACAACGCGGCGGCAGTGGTTGGCTTTACAGTGAAAGGGCTACGAGCACTTATGATCTGGTGGAAC AGATGTTCTACCTCTATGTTCGTGTGGTGAAGGCCAAAGAACTCCCACCAAATCCTGTCACGGGAAGCGTCGACCCTTAT GTTGAGGTGAAGGTTGGCAATTACAAGGGAAAAACAAGGCACTTTGAGAAGAAGACCAACCCTGAATGGAAGCAGGTTTT TGCATTCTCAAAGGAAAAGATACAGTCTTCATTTGTTGAAGTATATGTGAAAGACAAAGAGATGGTTGCCAGAGATGACT ACATAGGGAAAGTTGACTTTGATATGCATGAAGTTCCAACAAGAGTCCCCCCAGATAGCCCCTTGGCTCCTCAGTGGTAC AGGCTTGAGAATCTGAAGGGAGAAACCAGGAGAAGAGGAGAAATCATGCTGGCTGTTTGGTTGGGAACACAAGCTGATGA AGCATTTCCAGAGGCTTGGCATTCAGATTCTGCTTCAGTTAAAGGGGAAGGACTTTACAGTATCAGATCAAAGGTGTATG TCAATCCAAAGCTCTGGTACCTCAGAGTTAATGTTATTGAAGCACAGGATGTTGAGCCACATGATAAAAGCCAGCCACCC CAAGTGTTTGTAAAGGCTCAAGTTGGACAACAAATGCTAAAGACAAAGTTGTGTCCAACAAAAACAACCAATCCAATGTG GAATGAAGATCTGGTGTTTGTGGCAGCTGAACCTTTTGAAGAACAGCTGGTGCTAACTCTAGAAAACAAGGCTTCAGCAG CAAAAGATGAAGTTGTGGCCAAATTGACCCTGCCGCTGAACAAATTCGAGGTCCGTATGGATCACCGCGCGGTAGACTCG CGGTGGTATAACGTTGAGAGATTCGGCTTTGGTGTTTTGGAGGGTGACAAGCGGAATGAAAGAAAATTTTCAAGCAGAAT TCACCTCCGGGTCTGTCTTGAAGGTGGTTATCATGTTCTTGATGAATCCACAATGTACATTAGTGACACAAGACCAACTG CAAGACAGCTATGGAAGCAGCCAATTGGGATTCTTGAAGTGGGAATCTTGAGTGCTCAAGGGCTCCAACCTATGAAGACA AACGATGGAAAAAGCTCCACTGATGCATACTGTGTGGCAAAATATGGACTCAAATGGGTCAGAACTAGAACAATCACAGA AAGCTTCAACCCGAAATGGAACGAGCAATACACATGGGAAGTGTATGATCCTTGCACTGTCATAACTTTTGGGGTTTTCG ACAACTCCCACTTGGGTTCGACATCTCAACAAACACCTGGTGGTGGAGCTAAAAACGACTCTAGAATTGGCAAGGTGAGA ATTCGTTTATCCACATTGGAAATGGATAGGATTTACACGAACTCATACCCACTACTTGTTCTTCGTCCCACGGGACTAAA GAAAATGGGTGAATTGCAACTAGCAATTCGATTTACATGTCTCTCTTTAGCTCACATTATCTACCTTTATGGACACCCTT TGCTACCCAAAATGCATTACCAGCATCCATTCACTGTGAACCAATTAGACAGCTTAAGATACCAGGCTATGAGCATCGTC GCGGTTCGCCTCGGGAGGGCAGAACCGCCGCTAAGGAAGGAGGTTGTTGAGTACATGCTGGATGTAGATTCTCATATATG GAGTTTGAGAAGGAGCAAAGCCAATTTCTTTAGAATTGTGACATTGTTTTCAGGTCTAATCTCAATGAGCAAGTGGCTTG GTGAGGTGCAGAAATGGAAGAACCCAGTGACCACAATTCTAGTTCATGTTCTATTCTTCATCCTCCTTTGCTATCCGGAA TTAATCCTCCCCACGATCTTCCTCTACATGTTTCTCATAGGAATTTGGAATTTCCGGTCACGGCCGCGCCACCCTCCACA CATGGACACCAAGCTTTCATGGGCCGAAGCGGCGCACCCAGATGAACTAGATGAGGAGTTTGACACATTTCCAACTTCAA AAGCTCAGGATGTGACAAAAATGAGATATGATAGGCTTAGAAGTGTGGCTGGGAGGATTCAAACTGTGGTTGGAGATATT GCAACTCAGGGTGAGAGGCTTAATGCTTTGTTGAGTTGGAGAGACCCAAGAGCGACGAGTTTGTTTGTGATTTTCTGTCT TGCTGTCGCGGTTGCCCTGTATGTTACGCCTTTCAAGATTGTTGCTGCTGTTGCTGGAATGTACTGGCTCAGGCATCCTA AGTTCAGGAGCAAGCTACCCTCGGCGCCTGGGAATTTCTTCAAGAGGTTGCCATCTCGTGCTGATAGCATGCTTTGA
Protein sequence (LotjaGi5g1v0143900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSKPAPKSNQEDYQLKDTKPSLGERWPHGGQRGGSGWLYSERATSTYDLVEQMFYLYVRVVKAKELPPNPVTGSVDPY VEVKVGNYKGKTRHFEKKTNPEWKQVFAFSKEKIQSSFVEVYVKDKEMVARDDYIGKVDFDMHEVPTRVPPDSPLAPQWY RLENLKGETRRRGEIMLAVWLGTQADEAFPEAWHSDSASVKGEGLYSIRSKVYVNPKLWYLRVNVIEAQDVEPHDKSQPP QVFVKAQVGQQMLKTKLCPTKTTNPMWNEDLVFVAAEPFEEQLVLTLENKASAAKDEVVAKLTLPLNKFEVRMDHRAVDS RWYNVERFGFGVLEGDKRNERKFSSRIHLRVCLEGGYHVLDESTMYISDTRPTARQLWKQPIGILEVGILSAQGLQPMKT NDGKSSTDAYCVAKYGLKWVRTRTITESFNPKWNEQYTWEVYDPCTVITFGVFDNSHLGSTSQQTPGGGAKNDSRIGKVR IRLSTLEMDRIYTNSYPLLVLRPTGLKKMGELQLAIRFTCLSLAHIIYLYGHPLLPKMHYQHPFTVNQLDSLRYQAMSIV AVRLGRAEPPLRKEVVEYMLDVDSHIWSLRRSKANFFRIVTLFSGLISMSKWLGEVQKWKNPVTTILVHVLFFILLCYPE LILPTIFLYMFLIGIWNFRSRPRHPPHMDTKLSWAEAAHPDELDEEFDTFPTSKAQDVTKMRYDRLRSVAGRIQTVVGDI ATQGERLNALLSWRDPRATSLFVIFCLAVAVALYVTPFKIVAAVAGMYWLRHPKFRSKLPSAPGNFFKRLPSRADSML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 39 | 39 | - | – | |
| Phobius | 1 | 513 | 513 | - | – | |
| PANTHER | 9 | 798 | 790 | 0.0 | – | |
| PANTHER | 9 | 798 | 790 | 0.0 | – | |
| Gene3D | 52 | 200 | 149 | 5.0E-27 | ||
| CDD | 57 | 183 | 127 | 1.7184E-61 | – | |
| Pfam | 57 | 160 | 104 | 5.3E-20 | ||
| SUPERFAMILY | 57 | 197 | 141 | 8.54E-32 | – | |
| SMART | 57 | 154 | 98 | 2.8E-15 | ||
| ProSiteProfiles | 58 | 139 | 82 | 14.541 | ||
| Gene3D | 207 | 353 | 147 | 9.5E-19 | ||
| Pfam | 219 | 324 | 106 | 5.8E-18 | ||
| SUPERFAMILY | 219 | 374 | 156 | 3.13E-27 | – | |
| CDD | 220 | 372 | 153 | 3.34257E-73 | – | |
| SMART | 220 | 318 | 99 | 8.9E-7 | ||
| ProSiteProfiles | 221 | 303 | 83 | 10.575 | ||
| Gene3D | 364 | 522 | 159 | 2.1E-25 | ||
| Pfam | 383 | 498 | 116 | 2.4E-24 | ||
| SUPERFAMILY | 383 | 520 | 138 | 3.27E-26 | – | |
| SMART | 384 | 495 | 112 | 4.7E-15 | ||
| CDD | 384 | 515 | 132 | 2.60275E-66 | – | |
| ProSiteProfiles | 385 | 480 | 96 | 11.359 | ||
| TMHMM | 514 | 536 | 23 | - | – | |
| Phobius | 514 | 531 | 18 | - | – | |
| Phobius | 532 | 595 | 64 | - | – | |
| TMHMM | 594 | 616 | 23 | - | – | |
| Phobius | 596 | 614 | 19 | - | – | |
| Phobius | 615 | 625 | 11 | - | – | |
| Phobius | 626 | 658 | 33 | - | – | |
| TMHMM | 631 | 653 | 23 | - | – | |
| Pfam | 643 | 798 | 156 | 2.5E-79 | ||
| Phobius | 659 | 740 | 82 | - | – | |
| Phobius | 741 | 770 | 30 | - | – | |
| TMHMM | 741 | 763 | 23 | - | – | |
| Phobius | 771 | 798 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0143900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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