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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0160900 |
| Transcript ID | LotjaGi5g1v0160900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT2G13620.1 cation/hydrogen exchanger 15; Swiss-Prot: sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15; TrEMBL-Plants: tr|I1KQP0|I1KQP0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0160900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:41164007..41167308) extracted from Lotus japonicus Gifu genome v1.2.
GTAATTCATCGTTGTTATTGTTCTACTAGAATAGAGGATCATAACCAATAATAGAAAGTTACAACCAATAGTTAAGGTAC ATGCCATCCCAAACAGACACATACATTTTCTCCAGAACGTGGTTTGAAGACAACAATTAACTTAGATCCTTGTAAGTCAT AAATCATAAGTTTCAAAACCTGATACAACCATAACCTAGGGAGAATATCAGAAGGAAGACATAAACTATGGGGGATTCCG CAGGAAATGCATGTTACAATGTATCTGTGATTCATCCAAATCGAATCTAGCAAATTGATAATGTTGTAAAATCAGAGCTC AGTATTCTCGCCTTTCAAATTTGCTTCACTGCATTCTTCTCTAGTATTTTCTTATATATCTATAAACGCCTCCTACAACC ACGTTTACTTTCCCAAATCGCTGTAAGTATATACAAGTGTTTCAATTCCTCTGTAAAATGATGAAATGTGATTGAAAATC AGTGTTACATTTTTAATTAAAAAACAAACAAACCTGGTGCTGGAAAGCTCCCGCTATGCGCCGAGGTATAGGGAAAGGCC ATATCCACTTCGTGGATTTAATGTAGGCCAGCCTCAATTTTGCAAGGGGAAAAAGCCTTGGCGCAGCGGTAAGGTTGAGT TTGCAGTCACATATTCGAGCCATGGAACTATTCTAAGAAAATCATAATAACTTGTTATTTTTCATTCTAACTTGAGGGTA TTCTAAATTCAAATTTGCAGGTTGGCTTCATCCTAACGAAACCATTAATAGGGAATTACGAATCTGTTTTTCAGTTCATT TATCCTGTAAGTGGGGTTATAAACATTGAAGTACTAGGACACATTGGATTGATCTTTTACTCATTCCTCAGTGGTTTGGA AATGAACCTTACTACCATTCTAAAATCAAGTACGAAGGCCAAAAGCATCGCCATTGCCGGGATCGTCTTTCCCATGGCGA TGGCACCGACTTTATATGCTTTGCATCGAAAAGTTTACATGGGACCTGATTTCTACAAACTTGAAGAAGACACAACTCAT GCTTATTTACTTTGGACTCTAGTTATCACTGTAACAGGTTTTCCAGTCGTAGCTCACTCCCTTTCTGATCTCAAGCTCCT TCATACGGGTCTCGGCAAAAATGCTTTAACAGCTGCCATGATTAGTGATACCTATGCATGGATTCTTTTCACATTAGTGG TTCCATTTTGTATTAATGCTAAAGGAGCAATGTACTCAGTGGTCTGTACCATAATATTCATTGTCTTTTGCATCTTTGTT CTACATCCTGTCATTGAAAGGTTCATTAACACGAAGACCGAAAATGATGACTGGAAAAATGGCCAACTAGTCTTCGTGGT GATGGGGGTCTTAGCTTTTTCATACTTAACAGATCTTCTTGGAACCCATGGGATTGTTGGAGCTTTTGTGTATGGACTCA TTCTACCTCATGGCAAATTTTTTGACATGGTTATGTCAGTTTCAGATGATTTTGCAACTGGGTTTCTGGCACCAACCTAC TTCGCTGGAGTTGGATTGAGACTCACATTAGAAAGTATTTTTATGCAGCAAAATTGGCACTTGACATTGCTAGTTGTACT CTTGTTGTGTGTTCCAAAGATTTTAAGCACGATGTTCACTGGTTTCTTCTTCGGCATGCGCAACCAAGAAGGTCTTGCCC TGGGCTTGATTATGAATACCAAGGGTGCCATGGCACTAATCATGCTAACCATTGCTTGGGATAGAGGGGTATTGATTTAT TTTAGTCATACTATTTAATTTAGTACATGTTTGAAAACTGACGTGAAGCCAAGATCATGGTAAACAAAAGTAAAAGGAAA TGGATTTTGGTTCACTGTGGTTTTTCCGAACGCGTTGCCAAACATGCACTTACTCAAATTCTTTAGTTTTGATTACTTAA ACAATATCTATTGAAATTGAAAGTTCTTGAAATGTGATATTGCAGATATTCTCTCCAGCAACCTACACTGTTATTACCTC TGCTGTTCTGCTTATGACTGTAGCGGTTTCACCAGTCCTGAATTTCACCTACAAGCCTAGAAAGAGATTTGAGCAGAACA AGCTAAAGACAATAGAAAAGCTAAGAGCTGATGCAGAGCTTCAAATTCTAACGTGTGTCCACAATACCCGCCAAGCCACC AGCATGACCCGCTTAATTGAATCCTTTAATGCGACAAGAGTGTCTCCAACACAAGTTTTTGCACTCTAACTTATTGAGTT CACCAAACGCGGTGCTGCAGTTGTTGCTGCTCACATGGAGAAGCCTAGTCATCATAACGGAGTGCAAAACCTGACCACAA CGCAAGCAGAGTTAGAGAACATTGCTAGCATCTTCGAAGAATTCGGAGAGGAACATGATGCCACAAGAGTCCATACCTCA AGTGTCATGTCAAACTACAACACCATTCATCAGGACATACACTTCACAGCAAATGAGAAATACACAAGCCTAATTCTCCT TCCATTCCACAAACATTTATCTTCAGAAGGGGTGTTAGAAACAACTAATTTAGAATATAGAGATATAAATCAAATGGTAA TGCATGATGCAACTTGTTCTGTGGGAATCTTTGTTGATCGTTTTTCTGGGAACTTACCGAAAAAAAAATTCCACATTCTC ATGCTTTTTATTGGTGGTCCTCATGATCGTGAAGCCCTGGCTATTGCGCGCAGGATGGCGGGGAAGGCAGGAGTCACGCT AACGGTGGTTAGATTCATATTTCTTGATGAATTGGCGGAGGTGGATACAAAAAGTTACCCTGAAGCGCAAGGGTTGTTAT CTTCTGTGATGGACATCGAGAAACAGAAAGAGTTGGATGATGAGTATGTAAGTTCATTCAGACTCAAAACAGTGAATATG AGTGATGATTCTATATCCTACTCAGAGATTGGTGTACATTCGATTACTGATATCAACATAGTCCTGGATGAGATAGAAAA CAATGGCTGCGATTTATACATAGTTGGACAAGGAAATTGTAAGAACTCTCGTGTGTTCTCGAATTTATTGTTGTGGTGTG ATTGCCCAGAACTTGGAGTTATGGGGGATATTCTTGCGTCAAAGGATTTTAGTTCACGTTCATCTGTGCTGGTTGTGCAG CAGTATGGGTTTGGAGGAATGGTTTCTAGAAAAGATCCTAACCTTGTGAGGGTTCAAGTCGCTTGAGGTGAAGACAAATC AATAATGGTTGTTAAGGATTTAACATGTGTATACGATGAAAAAGACTCGCTTTGTTTGCTTATTATGTTTCCTGAATTAT TTAGCATTTGCGTGAATTTATA
CDS sequence (LotjaGi5g1v0160900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCTTACTACCATTCTAAAATCAAGTACGAAGGCCAAAAGCATCGCCATTGCCGGGATCGTCTTTCCCATGGCGAT GGCACCGACTTTATATGCTTTGCATCGAAAAGTTTACATGGGACCTGATTTCTACAAACTTGAAGAAGACACAACTCATG CTTATTTACTTTGGACTCTAGTTATCACTGTAACAGGTTTTCCAGTCGTAGCTCACTCCCTTTCTGATCTCAAGCTCCTT CATACGGGTCTCGGCAAAAATGCTTTAACAGCTGCCATGATTAGTGATACCTATGCATGGATTCTTTTCACATTAGTGGT TCCATTTTGTATTAATGCTAAAGGAGCAATGTACTCAGTGGTCTGTACCATAATATTCATTGTCTTTTGCATCTTTGTTC TACATCCTGTCATTGAAAGGTTCATTAACACGAAGACCGAAAATGATGACTGGAAAAATGGCCAACTAGTCTTCGTGGTG ATGGGGGTCTTAGCTTTTTCATACTTAACAGATCTTCTTGGAACCCATGGGATTGTTGGAGCTTTTGTGTATGGACTCAT TCTACCTCATGGCAAATTTTTTGACATGGTTATGTCAGTTTCAGATGATTTTGCAACTGGGTTTCTGGCACCAACCTACT TCGCTGGAGTTGGATTGAGACTCACATTAGAAAGTATTTTTATGCAGCAAAATTGGCACTTGACATTGCTAGTTGTACTC TTGTTGTGTGTTCCAAAGATTTTAAGCACGATGTTCACTGGTTTCTTCTTCGGCATGCGCAACCAAGAAGGTCTTGCCCT GGGCTTGATTATGAATACCAAGGGTGCCATGGCACTAATCATGCTAACCATTGCTTGGGATAGAGGGATATTCTCTCCAG CAACCTACACTGTTATTACCTCTGCTGTTCTGCTTATGACTGTAGCGGTTTCACCAGTCCTGAATTTCACCTACAAGCCT AGAAAGAGATTTGAGCAGAACAAGCTAAAGACAATAGAAAAGCTAAGAGCTGATGCAGAGCTTCAAATTCTAACGTGTGT CCACAATACCCGCCAAGCCACCAGCATGACCCGCTTAATTGAATCCTTTAATGCGACAAGAGTGTCTCCAACACAAGTTT TTGCACTCTAA
Protein sequence (LotjaGi5g1v0160900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLTTILKSSTKAKSIAIAGIVFPMAMAPTLYALHRKVYMGPDFYKLEEDTTHAYLLWTLVITVTGFPVVAHSLSDLKLL HTGLGKNALTAAMISDTYAWILFTLVVPFCINAKGAMYSVVCTIIFIVFCIFVLHPVIERFINTKTENDDWKNGQLVFVV MGVLAFSYLTDLLGTHGIVGAFVYGLILPHGKFFDMVMSVSDDFATGFLAPTYFAGVGLRLTLESIFMQQNWHLTLLVVL LLCVPKILSTMFTGFFFGMRNQEGLALGLIMNTKGAMALIMLTIAWDRGIFSPATYTVITSAVLLMTVAVSPVLNFTYKP RKRFEQNKLKTIEKLRADAELQILTCVHNTRQATSMTRLIESFNATRVSPTQVFAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 328 | 328 | 4.9E-56 | ||
| PANTHER | 1 | 376 | 376 | 6.1E-191 | – | |
| PANTHER | 1 | 376 | 376 | 6.1E-191 | – | |
| Phobius | 1 | 14 | 14 | - | – | |
| Pfam | 3 | 314 | 312 | 9.9E-32 | ||
| Phobius | 15 | 34 | 20 | - | – | |
| TMHMM | 15 | 34 | 20 | - | – | |
| Phobius | 35 | 54 | 20 | - | – | |
| TMHMM | 55 | 74 | 20 | - | – | |
| Phobius | 55 | 75 | 21 | - | – | |
| Phobius | 76 | 86 | 11 | - | – | |
| Phobius | 87 | 111 | 25 | - | – | |
| TMHMM | 89 | 111 | 23 | - | – | |
| Phobius | 112 | 117 | 6 | - | – | |
| TMHMM | 116 | 138 | 23 | - | – | |
| Phobius | 118 | 138 | 21 | - | – | |
| Phobius | 139 | 157 | 19 | - | – | |
| TMHMM | 153 | 170 | 18 | - | – | |
| Phobius | 158 | 187 | 30 | - | – | |
| TMHMM | 172 | 194 | 23 | - | – | |
| Phobius | 188 | 207 | 20 | - | – | |
| Phobius | 208 | 228 | 21 | - | – | |
| Phobius | 229 | 233 | 5 | - | – | |
| Phobius | 234 | 257 | 24 | - | – | |
| TMHMM | 235 | 257 | 23 | - | – | |
| Phobius | 258 | 263 | 6 | - | – | |
| TMHMM | 264 | 286 | 23 | - | – | |
| Phobius | 264 | 286 | 23 | - | – | |
| Phobius | 287 | 297 | 11 | - | – | |
| TMHMM | 296 | 318 | 23 | - | – | |
| Phobius | 298 | 318 | 21 | - | – | |
| Phobius | 319 | 376 | 58 | - | – | |
| Coils | 322 | 342 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0160900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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