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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0174500 |
| Transcript ID | LotjaGi5g1v0174500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT4G02590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|O22768|UNE12_ARATH Transcription factor UNE12; TrEMBL-Plants: tr|C0JP12|C0JP12_LOTJA Putative basic helix-loop-helix protein BHLH4; Found in the gene: LotjaGi5g1v0174500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:44566792..44571600) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTTTATTTAGACTTAGCCTCAAAAGAAATGAATTCTCCATAAATGAAGCCTTTAAAACAAACAAGTTTTGCTCGAAA ACAAAAGTAGTTCTTATTCTTATTAAAAAACAAAAGAATAGAAACACTACAATAAAGCGTAGCGCTTCTTAACAAAGATA ATAAAGCCAAACCCCTCTCGATGAAGTGACGAGTGAGTTTACTACCAAAAAAACAGACCAACAACAACAAATACGGCAAA ACCCAGAACCTGAAACTTGCAAAACTCAAATTTCTCTACTTCGACTCGTTTTCCCAACTCGGCCGAGTCCAAACCGAGTC ATGGCGAATCACCCTTCCGACGCCCCCGCCGCCGACGACTTCCTCGAGCAAATCCTCGGCCTCCCAAACTTCGCTTCCGC CGACGGAACCGACGCTTCTTCCTTGCACGCTCCGATGATGCTGCAGCTCAACTCCGGCGACCTCGCCGCCGGCGGAGCCG GCTTTCACTCGCCGGTTTATCAGCTGGGACTGAGCTTGGACCAAGGGAAAGGAGGAGGGTTCTTGAAGCCTGATGATGCT TCCGGGAGTGGTAATCGTTTCCGTGAAGATGTTGTTGTTGGTGCCAGACATAAGAATGTAACATCATAGCCTTTTTCACT TCTCTTCACACAAAATTGCATGAATTATATTTCTATAAAACAGATTTTTTTTTTGTTTCCACTTCTGGCATGTGATCATT TGTTGAAGCTAAAATTGACTTGGTGAAAATATTGATCATTTTGAATTTGAAGTGATTAACTTCTCAATAAGCATTTATAG GGAGAAAATGACCAAGTTGGAATAAACAACTTGCTTTTTCACTTAGATTAGCCTATAGAATGCAAATAGAGTAGAAAGCA TTCTAGACTTTAATGGAAATAACAGACAAGCAGTGGAATGGTATTTTGTTTTCTAATTGTTAAATTTCAGAAATGACATT ATTCAACTGCTTGGCATAGTAACAAATATTTTCAGCTTGCGTATGTCGATGACAACTTGCAACAGCATCAACAGTTGCTA TTGTTGAAATTTTGTGCTTCTTGAGTGGATCATCCTGTATATACTTGACTTGTAGTATAATAGCCTTCAGAATTCAGATA AGAATTCATGTTGAAGTTGAATGAATCATGGTTAGATATGGATTCTGAGACTGACTCAATCTTAGGTCATATTAGTTCAT GCCTGTTTGGCATGTTTTGATGAATTTGTTTGAACATGTGAGAATATGACATAGTAGAAATTAGGCCTTTTGGATCTTGA CACCAGTACACAGGGCCATTTTTCACAGGAGGCTTTTAAATCATATAGGACACATATATGCTTAGTTTCAAGTAATCTAT AAATAAATGCTTACTTTTTGCAAGATTGATTGTGAATTTTTTATACTTACCTTTCTTCTTTTGGAAGGGCCTGAAAAAGA TTTGTTGATAAATTGATCAAGTAGCAAATTTACTCTGTCTCTCTCTCTTTATGATTATAACTTTTTGCAGGCTTTTCATG GGCAACCTATGCCCACTACTGTTCCTTCTGCTCCACATCCACCACCTATGCGTCCTAGAGTGCGGGCTAGAAGAGGACAG GCTACAGATCCACACAGCATAGCTGAAAGGGTAGACTCTGGGATATTTTCAACAATATGAACTTTCTTTTTGTGATGCTC TTGGTTAGCTAATTGTTCTTTATTCTTCATTTTGCCACTAAATAACAGCTGCGCCGCGAAAGAATAGCCGAAAGAATCAG AGCTCTGCAAGAACTGGTTCCTAGTGTTAACAAGGTATGTGACTTCTCTTACTTGTCAATTTTATTACATTATGTAGTGA TAAGTAAGGATTTTATGTTTACTCTGAATGGAGAAAAGATAGAGGTCCCCTCCCCCCCCTCTGGGGGATCCCTAAATTTG ATTATACCTTTCAATTACTGGCAGATTAAATAAAAAAAATCCTGAAAATGGACTTTGAGGGGTGTGTAAGACTGATCTGT CTTGGTAGATATTGGTTATTTTATGAATCTTGGTAGATATTATTCATTGCATACTTGGTCAGAACATGATTATCTATAAT TCCACAATTCCACTGGTCATGTCTGTCCTTTTAATGTGAATGTCAGAATGTGGTGATTAGACATTATTTATGTGGCTATA TTTTGACACATGCGACTCTTTTTTGCATTTTGTATAAATTTTTGAAATTAAATGCTTCAATTCATGAATATGAGTTCTGG CTTATCTAGGAGCTAATTTTTCCCCAAATGTGACTCCTAACCAGACAATTAGTGCCTTGAAGCTGAAGTCTGTGTCTGTT GGACAGTACATTATGCTGGGGTTTTTGAATGCAATGACTGGCATGAAGTGTTAATTTTTGGGTCCTGCACTTTTTGCCTT CTTCCTTACCTTTTATAGGTTAAAAGATGGTAATTGCATATCGATGATTAATTTTTTTCCTTTGGCAGTACGTGCGGCCT GTGGAAGGTCAGATGCATGATTCCTCTATGATATGAGAATGAGGCTTTATTTTTTATTTTTATTTTTATGTGTGTGTGTC CACTTGAAGAATGATTTAAAGCCAACTTCTTGTGTTTGAGTTTTGAAAATGGCATCTAGATATAGGGACCAATTGAATAA TTAACTGTATTTTTTTTTTTACCTTCGGCTGTATAATTTTAAAATGTTTCTAATATTATTTTGTATTTGTACTTTATTTT AGACAGATAGAGCTGTCATGCTGGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTAATGTTTTC CTGTAATCTTCATGGATTTCACATTTGATTTCTACCGTTATTAGTTCTTACAATTAATGATAGCTATAGACAGGATTTGT GGTTTATTTTGTTGAACCTGTTACAACCTATGCCTTTTGACCTCTCAACCTTAACAATCATCATTTAGTTGGGTTTCAAC TTGTGATCATGAGCCTTAGGCACCACTTTGGTGCAGGACCTATTAGCCATTGGATTTTATTACTGAAGTATAGTCAATAT CACAATCTAATGATAGCATTTTCACATTAGTTTGCACTGTAGATACTTTAACTACCAAATAATATCTAAGGGTCTTCAGT TGTGGATTCCATTGTCTTTCACTAATGAATGGTCTGATTTCAATATCTGTGAATAGTAGAAGCTATTTCTGCAAACATGA TAACAGTTTCAATGATATCTCTTGACTTGTGTGGGAGACTGGAAATAAATATTGCTCTTGAATATAAAAGTGAAAGCAAG GCTTTTTATCAGATCCAGATTCAAAATTTTCAGTAATATGAAACGAAGATGCAAAGGACTTCCACTGATGGTTAATACAT GTCTTTCAGGTTCTGAGCATGAGTAGATTAGGTGGAGCTGGTGCAGTGGCGCCACTGGTAACTGACATCCCATTATCATC AGTTGAGGTGATTATTTATAAGTTCTAATTTATGTGAATCTGGCACTTGGCACGATTTTGTTTTCTTTTCCAAACAACTC ATAAAATTTAGTATTTTTCAGGAAGAAGGTGGCGAGGGTGGAAGGAACCAACCAGCCTGGGAGAAGTGGTCAAATGACGG CACAGAAAAACAGGTAGCTAAGCTCATGGAAGAAAATATTGGGGCTGCCATGCAGTTTCTCCAATCAAAGGCACTCTGCA TCATGCCGATCTCACTAGCATCAGCAATATACCAGTCACAACCATCAGAAAACTCTAGTATAGTTAAGCCTGAAACTTCT CCTCCTTCATAGACAAACCTCAGGCACCGGTTCACCTTTCAGTGATCCCATCGAGCCATCGAGGGGTCACCTTATAGTTT TGGGACCCACGCGTTATTCGTCTGTTCCAATTCCAAACCTCCTTTAGTCATTGGCTCTCATCAAGTTGCATTCAAAGTAG GATGCCATTGTCCTTTCCTTTTTGCCGTTCTTTCTGCTTTGTCAATATAGGGTTCGATGTCAATAGCTTAAAAAATGCAA GCTGACCCCATCTTGTCTTGGAAAATTTCATGTAAAGGGAAATAACTTGTCAAAGTTCACTTTGAAATGCTCTTCCTTTT GTATCAATGGCGGGGATTAGTGGATGGTGATCAAAGTGCTTTTGTGGTGGGGCTTAGTTTTTGTAGTGGGCAGTGGGACC TTGTTAAAGGTTAGGTTGGTGTCTATATTTTTATTAGTGTTGCAACTCCTGAGAATTTGAAATGCATAGGTGAAATGGAT AATGGTTGCTTTAATAATGCTGGGTGTTGCAAGTCCAGCTGAAATTGATGGTGCTTTTTGTTTGTTTTCAAAAGTAATTG GACTTATAATGGAGGGAGAGATGAAATTAGCTAATGAGAACTATAGTGCTCTTTGAAGTCTTGACCCACCATATTAATCA GTAAGCAGTAATCTTAGCTTTGAATTTTTTTTCTTAAAAAAAGCTGGAAAAAGTTAAAACAGATTGATTAAAATTCAGTT AAGAATAACCATTCAATTTCTCCTAATACTCATAATCATTTCTACCAACGGTGATTATTTCAAGGCGTACATGCTTAGTT TTTTATTAAGTAAAATTTCGGGTTCGATTTATGTTTATAAAAAAAAATTAACTATGAGAGTTAATCCCATAGAAATGCGA ATGTCCAGCCTTGATAAGGATTGCATTTCGTGGAGGATATATGTGTCAGTTAAAAAAAGTTCATAATCATCTCCTTAATT GCTCTCAATAGAAAATTAAAGAGTAAAAGTAAGAAGTGATTTAGTTTACTATTATTAGTTCCTTATATAAAATTCAAGTA TCAACAAAA
CDS sequence (LotjaGi5g1v0174500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAATCACCCTTCCGACGCCCCCGCCGCCGACGACTTCCTCGAGCAAATCCTCGGCCTCCCAAACTTCGCTTCCGC CGACGGAACCGACGCTTCTTCCTTGCACGCTCCGATGATGCTGCAGCTCAACTCCGGCGACCTCGCCGCCGGCGGAGCCG GCTTTCACTCGCCGGTTTATCAGCTGGGACTGAGCTTGGACCAAGGGAAAGGAGGAGGGTTCTTGAAGCCTGATGATGCT TCCGGGAGTGGTAATCGTTTCCGTGAAGATGTTGTTGTTGGTGCCAGACATAAGAATGCTTTTCATGGGCAACCTATGCC CACTACTGTTCCTTCTGCTCCACATCCACCACCTATGCGTCCTAGAGTGCGGGCTAGAAGAGGACAGGCTACAGATCCAC ACAGCATAGCTGAAAGGCTGCGCCGCGAAAGAATAGCCGAAAGAATCAGAGCTCTGCAAGAACTGGTTCCTAGTGTTAAC AAGACAGATAGAGCTGTCATGCTGGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTCTGAGCAT GAGTAGATTAGGTGGAGCTGGTGCAGTGGCGCCACTGGTAACTGACATCCCATTATCATCAGTTGAGGAAGAAGGTGGCG AGGGTGGAAGGAACCAACCAGCCTGGGAGAAGTGGTCAAATGACGGCACAGAAAAACAGGTAGCTAAGCTCATGGAAGAA AATATTGGGGCTGCCATGCAGTTTCTCCAATCAAAGGCACTCTGCATCATGCCGATCTCACTAGCATCAGCAATATACCA GTCACAACCATCAGAAAACTCTAGTATAGTTAAGCCTGAAACTTCTCCTCCTTCATAG
Protein sequence (LotjaGi5g1v0174500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANHPSDAPAADDFLEQILGLPNFASADGTDASSLHAPMMLQLNSGDLAAGGAGFHSPVYQLGLSLDQGKGGGFLKPDDA SGSGNRFREDVVVGARHKNAFHGQPMPTTVPSAPHPPPMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN KTDRAVMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGGRNQPAWEKWSNDGTEKQVAKLMEE NIGAAMQFLQSKALCIMPISLASAIYQSQPSENSSIVKPETSPPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 275 | 269 | 8.7E-136 | – | |
| PANTHER | 7 | 275 | 269 | 8.7E-136 | – | |
| MobiDBLite | 101 | 133 | 33 | - | – | |
| Gene3D | 122 | 179 | 58 | 6.1E-13 | ||
| SUPERFAMILY | 127 | 188 | 62 | 3.66E-15 | ||
| ProSiteProfiles | 129 | 178 | 50 | 16.044 | ||
| Pfam | 134 | 178 | 45 | 1.7E-7 | ||
| SMART | 135 | 184 | 50 | 1.2E-10 | ||
| MobiDBLite | 208 | 227 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi5g1v0174500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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