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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0177200 |
| Transcript ID | LotjaGi5g1v0177200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mutator-like transposase; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q9SWG3|FAR1_ARATH Protein FAR-RED IMPAIRED RESPONSE 1; TrEMBL-Plants: tr|K7N523|K7N523_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0177200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:45126854..45130135) extracted from Lotus japonicus Gifu genome v1.2.
AAGCGACCCTTTTACCCCTCTCATCTCCCATTCTTCTAAACCATTGCCCTTCTGATTCCAAGGTTTTTCCTCTCTCAGCC ATTACCCGCCAAACCCTTATGCTTCAAACTCTTCTCTCTGTTTTGTTTCTTTCAATTTTCATCTCTTCTTTGAACTAATG GATTCTCTGTTTTTGTTTCCCATTGCAGGTTTCACTACCCACAGAAAGCTTTCAATTTTGTGAGTTTTTCTCTGTTTTCT CTTTTTTTTTTTTTTTTGTGAAACCAGACTTGTTAATAGCGCGCTATAGCGTAGCGCTCTAGGGTTCACCACTACTCCAT TATTCACCACTATAGCGCCGCAATAGCGCTTAAAATAGCGTTTTTTGGACTTGCCCCTACGCTATGCTATCCGCCATTAA CAACCCTGGGTGAAATTGATTTGAAGAAGAAAAATAAATGTTGTTTGGTTTATGAGCTGGGTTTCTCTGTAAGGAAATTT TGTAATTAGAGTATAAGAACCATAAAGGAACCACTTTGGGTTGTATTAGATTTATTTGCATGTGTTTGATTGATATTGAT GGAGAAATTCAGTTGGGGTTCAATTTGCAATTTGGGGGTATTCAATGATTTCTGACTCAATTTGCTAATTCACTTGTATT GCTGCATTTTCAGGGAGATTATTTGGATCTGGGATTTCGGAATTTGTTCTGGGGGTGTTATTGATATTTTGGGGGATTCT GTTCTCCACTGTTCCTCAGTTTGTGACAGAAGCATCTTTGTTTATGTAAAAGTGGTGAATTTGTGATGGCAAACCATGGT TTAGTTCTTGGTCAAAGTCGTGATCCGTCGTCCGTGCCAATTCGCCATTTGGGATTAGACCATACCGATGATCGTGATGC TGTTCATGAATTAGGTTCTGACCAGATTCAGGGTGTGGATATGGGATGTAAACAAGATAATCAAGGACTGGACCAGAGTC AGATACAGGAGCATGACATGGCTTCTCAATCTCAACTTCAACAACTAGAGCATGCTCAGAGTGTTAAGGAAAATGGTGAT AAGTTGGATGCAGATGATCAGGCTCATGAGGACCATGCTGATTCTGATAACCATGATAATAGATTGGCTTCGAGTGATGA GGCATTTGAGTTGAACTTATCAGATCCAGATAATCTTCAACTAGCTGTTATTGAGGATCATGATGATCTTCATGAGAAGT TAGAGTTTTCCTTGGTTGAAAATGAGGAAATGGATGATCGACAAGTCTCAGATATGATTGATGAGCAAACAATGGATTCG GTTTGCACTCCTCCTGTCCTTCAGTCGCGAGCCCTTGATCCTTCTTATAACCATCAACTGTTCGTGGGGCAACAGTTTCC TGATGTTCATAGCTGCCGTAGAGCAATGAGGGAGGCAGCCATTGCTCTTCGCTTTGAGATGCAGACGGTCAAATCAGACA AGGTTCGTTTCACTGCCAAATGTGCAAGTAAAGGATGCTCTTGGAGAATTCATGCTGCAAAGCTCCCTGGTGTTCCTACC TTCACAATCAGGACCATCCGCGGGGAACATACTTGTGCAGGAATTACCCATCTAGGTCATCAGCAGGCCACAGTGCAATG GGTTGCTAATTCTGTGGAAAGACAACTTAGGGAAAATCCTGATTGCAAGCCAAAAGAGATACTAGAACAGATCCACCGAG ATCACGGGATTGCCTTATCATATAAACAGGCATGGAGGGGAAAGGAACGGATCATGGCTGCTGTTAGGGGCTCATTTGAA GAAGATTATCGCCTACTGCCACAGTACTGTGATCAACTCAAAAGGTCAAATCCTGGAAGCATTGCAATGGTTAATGGAAA TCCTTCTGATGGCTGTTTCCAAAGCCTATTTATATCATTTCAAGCATCAATTTATGGGTTTTTGAATGCTTGCCGTCCCC TTATTGGACTTGACTCTGTTCCCCTTAAAAGTAAGTATCTTGGAACTTTGCTTCTAGCTATAAGTTTTGATGGAGATGGT GGTCTTTATCCCCTAGCATTTGGGGTGGTAGGTGAAGAAACTGATGATAACTGGATGTGGTTCCTATCTGAGTTGCACAC TCTACTTGAAACTAATGCTGAGAACATGCCAAGACTTTCAATTTTGTCCAGTAGACAGAAAGGTATTGTGGATGGAGTAG ATATGAACTTCCCCACTGCTTTTCATGGGTTCTGCATGCATTACTTGAGTGAAAATTTCCTGAAAGAATTCAGCAATGAA GTTCTGAGCAACATTCTCTGGGAAGCTGCTTGTTCCCTCACTGCCATCGATTTCGAAACCAAAATCCTCGAGATAGAGGA GATTTCAGAGGAAGCAGCAGCATGGATTCGAAGATTCCCTCCTCAATTATGGGCCGCAGCATATTTTGAAGGAAGCAGGT TTGGCCAACTAACAGCAAATATGGTTGAATCTCTGAATTCTCTGATAGCTGAAGCCTCAGGACTGCCAATCATTCAAATG ATGGAGTGCATCCGCAGGCAACTAATGACACTCTTCAACGAGCGGCGTGAAGCGAGTATGCAGTGGTCGAGCATCTTGGT CCCTTCTGCTGAGATGGCGGTGTCAGAGGCGATAGGACATGCACAAATGTACCAGGTGGTACGAGCAACTGAAGCTGAAT TTGAAGTTTTGTGCCCTTCAGATTCAGGGAGAAACATAGTGGACATTCGCACACGGTGCTGCACATGTTATGGATGGCAA AAGTGTGGTCTGCCATGTTCTCATGCTGTGGCGGTTCTCCTCGCGTGCCGGCAGAACGTGCATCGATTCACTGAAAGTTA CTTCACTGTGACGAGCTATCGCAAAGCATATTCACAAACCATACACCCCATTCCAGACAGAACCATGTGGAACAAGTTAA TTGGGTATGAATACGATAGTGGTGATGCTAGTACAGCTATGGAGGTTGTCATAACTCCACCAAAGTCTATGACACCACCG GCAAAGCCTAGGAAAAGGAGAGCTTCTGCTGCTCAAGATAGTGGAGGTCGAACGAAGCGTGTTGTGCATTGCAGCCGCTG CAACCAGCCTGGTCATTTTCGAAGTACATGTACTGTCCCTATGTAAATTAAGTATATACAGCATAGGATACAATGTCTTA TACTTGCAGTATTCCGGCATAGGTCTGGTTTAGTATTAAGATTAGATTATGATTAGACAGATGCACATTCTTTACTAGTT CAGATACAATCGTGCGCTTCTTTTTGGTTCTGGAAGAAACTAGTGATTATAGATTATACTACATGCAACATTTTTATCTC CA
CDS sequence (LotjaGi5g1v0177200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAACCATGGTTTAGTTCTTGGTCAAAGTCGTGATCCGTCGTCCGTGCCAATTCGCCATTTGGGATTAGACCATAC CGATGATCGTGATGCTGTTCATGAATTAGGTTCTGACCAGATTCAGGGTGTGGATATGGGATGTAAACAAGATAATCAAG GACTGGACCAGAGTCAGATACAGGAGCATGACATGGCTTCTCAATCTCAACTTCAACAACTAGAGCATGCTCAGAGTGTT AAGGAAAATGGTGATAAGTTGGATGCAGATGATCAGGCTCATGAGGACCATGCTGATTCTGATAACCATGATAATAGATT GGCTTCGAGTGATGAGGCATTTGAGTTGAACTTATCAGATCCAGATAATCTTCAACTAGCTGTTATTGAGGATCATGATG ATCTTCATGAGAAGTTAGAGTTTTCCTTGGTTGAAAATGAGGAAATGGATGATCGACAAGTCTCAGATATGATTGATGAG CAAACAATGGATTCGGTTTGCACTCCTCCTGTCCTTCAGTCGCGAGCCCTTGATCCTTCTTATAACCATCAACTGTTCGT GGGGCAACAGTTTCCTGATGTTCATAGCTGCCGTAGAGCAATGAGGGAGGCAGCCATTGCTCTTCGCTTTGAGATGCAGA CGGTCAAATCAGACAAGGTTCGTTTCACTGCCAAATGTGCAAGTAAAGGATGCTCTTGGAGAATTCATGCTGCAAAGCTC CCTGGTGTTCCTACCTTCACAATCAGGACCATCCGCGGGGAACATACTTGTGCAGGAATTACCCATCTAGGTCATCAGCA GGCCACAGTGCAATGGGTTGCTAATTCTGTGGAAAGACAACTTAGGGAAAATCCTGATTGCAAGCCAAAAGAGATACTAG AACAGATCCACCGAGATCACGGGATTGCCTTATCATATAAACAGGCATGGAGGGGAAAGGAACGGATCATGGCTGCTGTT AGGGGCTCATTTGAAGAAGATTATCGCCTACTGCCACAGTACTGTGATCAACTCAAAAGGTCAAATCCTGGAAGCATTGC AATGGTTAATGGAAATCCTTCTGATGGCTGTTTCCAAAGCCTATTTATATCATTTCAAGCATCAATTTATGGGTTTTTGA ATGCTTGCCGTCCCCTTATTGGACTTGACTCTGTTCCCCTTAAAAGTAAGTATCTTGGAACTTTGCTTCTAGCTATAAGT TTTGATGGAGATGGTGGTCTTTATCCCCTAGCATTTGGGGTGGTAGGTGAAGAAACTGATGATAACTGGATGTGGTTCCT ATCTGAGTTGCACACTCTACTTGAAACTAATGCTGAGAACATGCCAAGACTTTCAATTTTGTCCAGTAGACAGAAAGGTA TTGTGGATGGAGTAGATATGAACTTCCCCACTGCTTTTCATGGGTTCTGCATGCATTACTTGAGTGAAAATTTCCTGAAA GAATTCAGCAATGAAGTTCTGAGCAACATTCTCTGGGAAGCTGCTTGTTCCCTCACTGCCATCGATTTCGAAACCAAAAT CCTCGAGATAGAGGAGATTTCAGAGGAAGCAGCAGCATGGATTCGAAGATTCCCTCCTCAATTATGGGCCGCAGCATATT TTGAAGGAAGCAGGTTTGGCCAACTAACAGCAAATATGGTTGAATCTCTGAATTCTCTGATAGCTGAAGCCTCAGGACTG CCAATCATTCAAATGATGGAGTGCATCCGCAGGCAACTAATGACACTCTTCAACGAGCGGCGTGAAGCGAGTATGCAGTG GTCGAGCATCTTGGTCCCTTCTGCTGAGATGGCGGTGTCAGAGGCGATAGGACATGCACAAATGTACCAGGTGGTACGAG CAACTGAAGCTGAATTTGAAGTTTTGTGCCCTTCAGATTCAGGGAGAAACATAGTGGACATTCGCACACGGTGCTGCACA TGTTATGGATGGCAAAAGTGTGGTCTGCCATGTTCTCATGCTGTGGCGGTTCTCCTCGCGTGCCGGCAGAACGTGCATCG ATTCACTGAAAGTTACTTCACTGTGACGAGCTATCGCAAAGCATATTCACAAACCATACACCCCATTCCAGACAGAACCA TGTGGAACAAGTTAATTGGGTATGAATACGATAGTGGTGATGCTAGTACAGCTATGGAGGTTGTCATAACTCCACCAAAG TCTATGACACCACCGGCAAAGCCTAGGAAAAGGAGAGCTTCTGCTGCTCAAGATAGTGGAGGTCGAACGAAGCGTGTTGT GCATTGCAGCCGCTGCAACCAGCCTGGTCATTTTCGAAGTACATGTACTGTCCCTATGTAA
Protein sequence (LotjaGi5g1v0177200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANHGLVLGQSRDPSSVPIRHLGLDHTDDRDAVHELGSDQIQGVDMGCKQDNQGLDQSQIQEHDMASQSQLQQLEHAQSV KENGDKLDADDQAHEDHADSDNHDNRLASSDEAFELNLSDPDNLQLAVIEDHDDLHEKLEFSLVENEEMDDRQVSDMIDE QTMDSVCTPPVLQSRALDPSYNHQLFVGQQFPDVHSCRRAMREAAIALRFEMQTVKSDKVRFTAKCASKGCSWRIHAAKL PGVPTFTIRTIRGEHTCAGITHLGHQQATVQWVANSVERQLRENPDCKPKEILEQIHRDHGIALSYKQAWRGKERIMAAV RGSFEEDYRLLPQYCDQLKRSNPGSIAMVNGNPSDGCFQSLFISFQASIYGFLNACRPLIGLDSVPLKSKYLGTLLLAIS FDGDGGLYPLAFGVVGEETDDNWMWFLSELHTLLETNAENMPRLSILSSRQKGIVDGVDMNFPTAFHGFCMHYLSENFLK EFSNEVLSNILWEAACSLTAIDFETKILEIEEISEEAAAWIRRFPPQLWAAAYFEGSRFGQLTANMVESLNSLIAEASGL PIIQMMECIRRQLMTLFNERREASMQWSSILVPSAEMAVSEAIGHAQMYQVVRATEAEFEVLCPSDSGRNIVDIRTRCCT CYGWQKCGLPCSHAVAVLLACRQNVHRFTESYFTVTSYRKAYSQTIHPIPDRTMWNKLIGYEYDSGDASTAMEVVITPPK SMTPPAKPRKRRASAAQDSGGRTKRVVHCSRCNQPGHFRSTCTVPM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 26 | 26 | - | – | |
| PANTHER | 3 | 708 | 706 | 1.3E-301 | – | |
| PANTHER | 3 | 708 | 706 | 1.3E-301 | – | |
| MobiDBLite | 44 | 84 | 41 | - | – | |
| MobiDBLite | 45 | 78 | 34 | - | – | |
| Pfam | 184 | 248 | 65 | 3.2E-22 | ||
| Pfam | 382 | 477 | 96 | 7.4E-11 | ||
| ProSiteProfiles | 619 | 662 | 44 | 9.916 | ||
| Pfam | 621 | 661 | 41 | 5.2E-8 | ||
| SMART | 637 | 664 | 28 | 9.8E-8 | ||
| MobiDBLite | 719 | 742 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi5g1v0177200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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