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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0177500 |
| Transcript ID | LotjaGi5g1v0177500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zein-binding protein; TAIR: AT2G30690.1 lateral signaling target-like protein (Protein of unknown function, DUF593); Swiss-Prot: sp|F4INW9|MYOB4_ARATH Probable myosin-binding protein 4; TrEMBL-Plants: tr|K7LZ91|K7LZ91_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0177500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:45160741..45166077) extracted from Lotus japonicus Gifu genome v1.2.
AATTAATATTTTATTTTATTCCAACCTTGTTTTTAGTGAAAAAAGACAAATTTTTCTATCTCTGATCAGAAATTGTCTCT CTGCACTTCATCCTGTCTCTTTCTCCCTCATCAACCTGCAGAACAGGTACCACCGCATTTTCCTGCATTTTCCCATATCA AATATCAATGAAATTCACCCATTTTTCTTAACAATCCATGATCTCTCTTTATTTTCATTATTATAATTTTTAACAATTTT GCATTTTTCTCAGAATGCAAATCTCTTGAAATTTGTGCCCCTTGAATAATTCATTCTGTTTTGGATATTGGCAATCATTT TGTATTTATTTAATTTAATTCTCGTAGGTTGTAACTAAATTTGTGGTTGGTAGTTAACAATCTAAGGCTTAATGTGTCAC CGTTGGGTTGGTTTCAATTCATTTTCTGTTAATGTTTATGGCTACTCGACAATTATTATCAGGTAGTTGGAAGATAAAGA GTGTATTTCGTTTTCATCATTTACTTTCCCTCTTTCTAATTTTTTTTTTCATTTTATCTTTTTTTTTTCAATTATATTAT TGTTGTTGCCTAAGGTGTTGAGGACTTGTGATGTTGTTGTGGTTGGATTGTCTATGAATGATGTTTGGAATTGAAAATTG ATCATTGATTCATTGTGTAAAATGGGGTGTCGATTAAATGCAGTACACTTAACTTGGATTTTGATTTTGATTTAATGGTG ACTTTTTGATTACCTTTAATTTTGTAGCCTTCTAGCTCTAGCTCCTTGAGATTTATGATAGATAGATACCTCATCTATCT TGGGGATGAAATTCTGGGCCTTGAGTTGGATGGCTGGGATTTGAGTAATGACTTTCCCCGTCTCGAATCTCACCGATTCG CAGAGCGATTGTGGCGTGTAGATAGATGGCAGCAAGTGGAAGAAGAGGAGCTTCATTTGCCAAAGCAAAGAGGATGCAGG GTTTCATTCCCATTCTCACATCTGCAGCTTGTGAGTGGTTTTTGATATTCCTGCTGCTAGTGGATTCTGTGCTATCATAT CTGCTGACAAAGTTTGCAAGTTATTGCCAATTGCCATTGCCTTGTTTGTTATGTTCTAGGCTTGAAAAGCCAGAGTTCTA TGAGAACCTGTTTTGCAGCCATCACAAATCAGAAATATCATCTCTGATATTGTGTCATGTTCATGGCAAGCTCGCGGATG GTCATAGGATGTGTGATGATTGTCTTCTGTCAGTCACCGCAAACGTTAAACGCAACACCAAGACTCACAGGTTGTTGGTG GGCAAATTGGGGATGAACCTTGGTGGTTCTGGTTCACTGAGCAGAGATTTGTTTACTGGCCCTAAGGTATCAAGGCCATG TACTTGTTGTGGCAGGCTCTGGAAGTCAGAACAGAAATCACCGGGGAGAGCTGTTCTTAAGCCATACATTCCGTTGCCAC ATGTACCGAGGCAAAGCCGTTTGAATCACCGGGGCAACATAAAGAAAACAAGGGATAAGTTTTGTGGATCAGAAGGAAAA AACATTTTTAATCCATTATCTAATGTTGGGTACAGTGTGCTGAGACTTACTTCTGATTCCGAGTCTGAGTTTCCATTTTC TGATGAGGATGATGTTGGAAGTGTATTTCATGAAGACATGGAAGTTTCCAATGGCCCAAGAGCTAAATTGACATCAATAA CTCCCCCAAATTGTGTTCCGAGCGATATGAATCCAGCAAAGGAAAACGGTGGTTCTCCCAAACACAAGCCTTTGGTTAAT GTCAGCAATCACCAAAATGTGAATGACAACATTGTGTTAGAAATGAAATTGCAGCAAGAGAATCAAAAGTCAATGATTTA TGACCTGCCTGAGCTCATTTCACTAGATGAGGTTTCACCATCACCTATTGTTGTGAATGTTTCTACTAGAGAATCAGAAG CAGAAGAGAGCAAGAACACTTCTCTTTCTCAGAATTCTCTTCCTGCTTTCCTGTCCGAGCTTATGAGTTTCGATGGCACT CTTGCACATGCCCAAGCATCGTCAGAAAAATGTAACCTTTCTCTCTCACTGCATTTCCATTTCGGTTCTTCAAAATAGTC TAACATTTTCTTTCTCAAATATTTTCAGCTGTAGGTCTTCCACAAGCACATGATACAGAAATCGTATCTGAAAAGTATGG GCAAGTCTCAGAGAAGATTGGTAGCAATGAATCATCTAATGCAACTGAATCAGTGGTATGTGATTCTGCTCCTACAAGTC CTAGACAAGAGAACTCAATTACCATGGGTAAATATCCTGTCATGACTAAGGAAAGAGAAGTAACTGATTTTGTCATAGAA CAATCAACGACCGAGGAAATAGATAAAGTCAAGGAAGATGTGGAGCTATCACCATCACACAGTTCTTCTCTTGATGGGTC TAATCATGTTCACTCTCCAGAGATGCAAGGTGAGACTTCTAGTCCAAATCGGACTCAGGAACTTCAAAAGTCACCATCAG TAGAATCTGGTCTTGAATCTCTGGATGGAGGCAATGTCGATGAAATTGAAGGGGAGTCTGTTGTTGATCGATTAAAACGA CAGGTTGAGTATGACAAGAAATGCATGGATGCTTTACACAAGGAACTGGAGGAAGAAAGAAATGCTGCTTCTATTGCTGC AAATGAAGCAATGTCTATGATTACAAGGTTACAGGAGGAGAAAGCAGCGCTGCAAATGGAGGCTCTTCAATACTTAAGAA TGATGGAAGAGCAAGCAGAATATGATAATGATGAATTGGATAAAGTTAATGATCTACTAACAGAAAAGGAAAAGGAGATA CAAGATTTGGAAGCTGAGTTGGAATTTTATCGGTCAAACTTCATGGATGAGCCTGTGGACCACAATATACATGAGGAAAG TGGAGATCCAAAAGAAGAAAATATTACAACACAAAATATCAGTGTGCATAACATCACAGATAGTACTGTATACAAATTTC CCCATCCACAGTTTGCTGAAGCTTCTGAAGTCAGTCATGAAGCTGCGAGTAGAACATCTTTTTTAGAATTTGAAGAGGAA AAGCTGTACATTTCACAATGTTTGAAAAGCGTGGCAAAGAAGCTTCATCAATTTTCTTGTAATGAAATCAGTGAATTGAA TCAACAAGGAGCTACTAACGGTGAAGGGCCGTGTTTAGATGGTCATGAAGAGATTGATTCGTCCATACAGAAAAGTATTA TGTCGAATGTAAATCATAAAGACAAGGATGCTTCAGTAGCTTCAGATAGTGATGATTGTTCTATTAGTATAGAAAACAAT CATTCTATATCTGTTGGACCAAAAACTCCCACGCCTAGAAGAGAAGCTGAGCTGGTTGCTCTAGAAAATGAAATATCAGA CCTTAATGAGAGGTTGGACGCACTCGAATTCGATCATGATCTTCTTGAACACATAATAAATTCTCTTCAAAATGGAAGTG ATGGAAAAGAGTTTATTCAAGACATAGCTCATCAATTGCGTGAGCTACGGAAAGTTGGAATAAAATCAAGATGGTAAGCA TACAAGCTATTAAGCATGAACTCCTTACTTGTTGATATGCCAGCAGACTAATATTTTTTGTACCTTTATTAGTTTGCTAC CACATTATTTAGCATGAGTGCACTTATGCTTATGGTATAATCTTTCATTGGGTATCAGTTGTTGGCATTGTCTGTTGTTG ATGCATAGCACGTATTTCTTAGTCAGAATTATCAAGTCATCTTTTAACATAGTCTGTGAACATTATCAATTAGTAAAAGA AAGACTGGTGACAATTAGCTGATCTTTTCCTGCTACTTGTTTCTAGATGCGATTAATCATGATAAATGGATTTGGACGAT GATACTTGTTTTTAGTAATGCCTCTTTTTTCCTTAGGGTGTGTTTGAATTTCTGTCAGCGCACATTTCAAGGTAGTTTGA ATTTGCTATTAGCAATTCATGTCTCTTTGTCATTTGAGTGAATGTCTTTTGATATACCTTATTCCATTTGCAAGAATTTT AAGCTTTTGGCACTGTACGTGAGTGTCTCTACCGATAAGAATATCTGGGGTTACAACTTTTATTTACAATCTTCAGTTCA TTCTCTATAGCATTTGTTTTGAATATTTCATTCCATTTTGGTATTCTTACTAATATCTATTTGTAATTATTTCAGATGCT TGCAAGATCAGAATGCGAACTCAAGAAAACAGGAAGAAAAAAAAAATGAAACTTGTAGTCTTCTGATGACAATGGGCAAA ATATTACAGAATCACAGAATCATGTTTTATTTTTTTGATATGCATGTATATTGTGGAAAGCCATGATATCTTATGTGAAC AAGTACATAGAGTAGTAATAGCAATAGTTAACTCTGGTTTTGGTCTCTTGATCCTTATTTGCCTGTTGGGTTTTTTTCTT TCTTTCTTGTCCTTTGTGTTTTGTGAGCTGAATAGAAGGTGGAGTTTAGTTCTGGTGCATTGATCAGATGGTACCTGGGT AAGTTGGTACTTTCTGTTAAGAGAATTTTCAATATGTATGGAGTAATTTAGCACCAAAACTGCCAAATTGGTATAAATTG TACAAGTTTTCTATATGGGGGTGCGACACTTAGTGTGATCATAATTGCCAAGTAATATTAACATAAAGGTTGAATTGCAG TTTGTCTCCCTCTAATTTTGAATATGGAACTTGTTCATAGTTAATATAACAGATTTGTTCATTCTCTCAGTTTCTTATAC TTAAATCCTTGAATCTTCATTTTTTATTAAAATACTTTGGGTATTGTTGAGCTAAAATCATTAACGCCACGATTCTCGAC ATCAATGTTAGAAAGGCGATTGCTCGACGGAAGAGACTATGGTAAGACTTGTGGCTCAGCACGTGGCGTCCCCCAAAGAC AAGTTAGCAAAGGCCACATCTCGACAAACTCAGCAGATGAAGGAACTTCGACAAGCTCAACGGAAGAGGCAGTTACCGAG TGATGGGCAATTATGAGCACGTGCGTGTACCCACGATGCCACGAATGGCAACGGTTACCCACGACTCAAGACCGCCCACG TTGCAATTAAAATCACGTGCTCAGAATCTCCAGTTGAACGTGGGGTAAGGCGCCAAAATTCAAACCCACAAAGCCCCATA CACACTGAAGAAAAACCGCCAAGAACGTGAAGGAGGAGAGAACACTATAAATAGAAGAAGCAGCTTCAGAAAAAGGGTTC CCAACTCAACTCTAAAAAAGTCACTAAAAGCTCTAATGTCCGCATCAATGAGACTCAAGGAGCGAGACGTGATGATGGAG GAGTACGTTGCAGAACCAATTGTTTAGTTTTCTTGCATTAAGCTTGTTAATTTCCAG
CDS sequence (LotjaGi5g1v0177500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCAAGTGGAAGAAGAGGAGCTTCATTTGCCAAAGCAAAGAGGATGCAGGGTTTCATTCCCATTCTCACATCTGC AGCTTGTGAGTGGTTTTTGATATTCCTGCTGCTAGTGGATTCTGTGCTATCATATCTGCTGACAAAGTTTGCAAGTTATT GCCAATTGCCATTGCCTTGTTTGTTATGTTCTAGGCTTGAAAAGCCAGAGTTCTATGAGAACCTGTTTTGCAGCCATCAC AAATCAGAAATATCATCTCTGATATTGTGTCATGTTCATGGCAAGCTCGCGGATGGTCATAGGATGTGTGATGATTGTCT TCTGTCAGTCACCGCAAACGTTAAACGCAACACCAAGACTCACAGGTTGTTGGTGGGCAAATTGGGGATGAACCTTGGTG GTTCTGGTTCACTGAGCAGAGATTTGTTTACTGGCCCTAAGGTATCAAGGCCATGTACTTGTTGTGGCAGGCTCTGGAAG TCAGAACAGAAATCACCGGGGAGAGCTGTTCTTAAGCCATACATTCCGTTGCCACATGTACCGAGGCAAAGCCGTTTGAA TCACCGGGGCAACATAAAGAAAACAAGGGATAAGTTTTGTGGATCAGAAGGAAAAAACATTTTTAATCCATTATCTAATG TTGGGTACAGTGTGCTGAGACTTACTTCTGATTCCGAGTCTGAGTTTCCATTTTCTGATGAGGATGATGTTGGAAGTGTA TTTCATGAAGACATGGAAGTTTCCAATGGCCCAAGAGCTAAATTGACATCAATAACTCCCCCAAATTGTGTTCCGAGCGA TATGAATCCAGCAAAGGAAAACGGTGGTTCTCCCAAACACAAGCCTTTGGTTAATGTCAGCAATCACCAAAATGTGAATG ACAACATTGTGTTAGAAATGAAATTGCAGCAAGAGAATCAAAAGTCAATGATTTATGACCTGCCTGAGCTCATTTCACTA GATGAGGTTTCACCATCACCTATTGTTGTGAATGTTTCTACTAGAGAATCAGAAGCAGAAGAGAGCAAGAACACTTCTCT TTCTCAGAATTCTCTTCCTGCTTTCCTGTCCGAGCTTATGAGTTTCGATGGCACTCTTGCACATGCCCAAGCATCGTCAG AAAAATCTGTAGGTCTTCCACAAGCACATGATACAGAAATCGTATCTGAAAAGTATGGGCAAGTCTCAGAGAAGATTGGT AGCAATGAATCATCTAATGCAACTGAATCAGTGGTATGTGATTCTGCTCCTACAAGTCCTAGACAAGAGAACTCAATTAC CATGGGTAAATATCCTGTCATGACTAAGGAAAGAGAAGTAACTGATTTTGTCATAGAACAATCAACGACCGAGGAAATAG ATAAAGTCAAGGAAGATGTGGAGCTATCACCATCACACAGTTCTTCTCTTGATGGGTCTAATCATGTTCACTCTCCAGAG ATGCAAGGTGAGACTTCTAGTCCAAATCGGACTCAGGAACTTCAAAAGTCACCATCAGTAGAATCTGGTCTTGAATCTCT GGATGGAGGCAATGTCGATGAAATTGAAGGGGAGTCTGTTGTTGATCGATTAAAACGACAGGTTGAGTATGACAAGAAAT GCATGGATGCTTTACACAAGGAACTGGAGGAAGAAAGAAATGCTGCTTCTATTGCTGCAAATGAAGCAATGTCTATGATT ACAAGGTTACAGGAGGAGAAAGCAGCGCTGCAAATGGAGGCTCTTCAATACTTAAGAATGATGGAAGAGCAAGCAGAATA TGATAATGATGAATTGGATAAAGTTAATGATCTACTAACAGAAAAGGAAAAGGAGATACAAGATTTGGAAGCTGAGTTGG AATTTTATCGGTCAAACTTCATGGATGAGCCTGTGGACCACAATATACATGAGGAAAGTGGAGATCCAAAAGAAGAAAAT ATTACAACACAAAATATCAGTGTGCATAACATCACAGATAGTACTGTATACAAATTTCCCCATCCACAGTTTGCTGAAGC TTCTGAAGTCAGTCATGAAGCTGCGAGTAGAACATCTTTTTTAGAATTTGAAGAGGAAAAGCTGTACATTTCACAATGTT TGAAAAGCGTGGCAAAGAAGCTTCATCAATTTTCTTGTAATGAAATCAGTGAATTGAATCAACAAGGAGCTACTAACGGT GAAGGGCCGTGTTTAGATGGTCATGAAGAGATTGATTCGTCCATACAGAAAAGTATTATGTCGAATGTAAATCATAAAGA CAAGGATGCTTCAGTAGCTTCAGATAGTGATGATTGTTCTATTAGTATAGAAAACAATCATTCTATATCTGTTGGACCAA AAACTCCCACGCCTAGAAGAGAAGCTGAGCTGGTTGCTCTAGAAAATGAAATATCAGACCTTAATGAGAGGTTGGACGCA CTCGAATTCGATCATGATCTTCTTGAACACATAATAAATTCTCTTCAAAATGGAAGTGATGGAAAAGAGTTTATTCAAGA CATAGCTCATCAATTGCGTGAGCTACGGAAAGTTGGAATAAAATCAAGATGA
Protein sequence (LotjaGi5g1v0177500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASGRRGASFAKAKRMQGFIPILTSAACEWFLIFLLLVDSVLSYLLTKFASYCQLPLPCLLCSRLEKPEFYENLFCSHH KSEISSLILCHVHGKLADGHRMCDDCLLSVTANVKRNTKTHRLLVGKLGMNLGGSGSLSRDLFTGPKVSRPCTCCGRLWK SEQKSPGRAVLKPYIPLPHVPRQSRLNHRGNIKKTRDKFCGSEGKNIFNPLSNVGYSVLRLTSDSESEFPFSDEDDVGSV FHEDMEVSNGPRAKLTSITPPNCVPSDMNPAKENGGSPKHKPLVNVSNHQNVNDNIVLEMKLQQENQKSMIYDLPELISL DEVSPSPIVVNVSTRESEAEESKNTSLSQNSLPAFLSELMSFDGTLAHAQASSEKSVGLPQAHDTEIVSEKYGQVSEKIG SNESSNATESVVCDSAPTSPRQENSITMGKYPVMTKEREVTDFVIEQSTTEEIDKVKEDVELSPSHSSSLDGSNHVHSPE MQGETSSPNRTQELQKSPSVESGLESLDGGNVDEIEGESVVDRLKRQVEYDKKCMDALHKELEEERNAASIAANEAMSMI TRLQEEKAALQMEALQYLRMMEEQAEYDNDELDKVNDLLTEKEKEIQDLEAELEFYRSNFMDEPVDHNIHEESGDPKEEN ITTQNISVHNITDSTVYKFPHPQFAEASEVSHEAASRTSFLEFEEEKLYISQCLKSVAKKLHQFSCNEISELNQQGATNG EGPCLDGHEEIDSSIQKSIMSNVNHKDKDASVASDSDDCSISIENNHSISVGPKTPTPRREAELVALENEISDLNERLDA LEFDHDLLEHIINSLQNGSDGKEFIQDIAHQLRELRKVGIKSR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 29 | 29 | 6.0 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 13 | 843 | 831 | 1.5E-216 | ||
| PANTHER | 13 | 843 | 831 | 1.5E-216 | – | |
| Phobius | 20 | 47 | 28 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 48 | 843 | 796 | - | – | |
| MobiDBLite | 396 | 429 | 34 | - | – | |
| MobiDBLite | 396 | 433 | 38 | - | – | |
| MobiDBLite | 445 | 464 | 20 | - | – | |
| MobiDBLite | 445 | 515 | 71 | - | – | |
| MobiDBLite | 465 | 504 | 40 | - | – | |
| ProSiteProfiles | 519 | 617 | 99 | 20.348 | ||
| Pfam | 523 | 613 | 91 | 4.8E-33 | ||
| Coils | 535 | 580 | 46 | - | – | |
| Coils | 592 | 619 | 28 | - | – | |
| Coils | 784 | 804 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Myosin binding | Interacting selectively and non-covalently with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments. |
Expression pattern of LotjaGi5g1v0177500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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