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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0180700 |
Transcript ID | LotjaGi5g1v0180700.6 |
Related isoforms 7 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Phosphate transporter; TAIR: AT3G54700.1 phosphate transporter 1;7; Swiss-Prot: sp|Q494P0|PHT17_ARATH Probable inorganic phosphate transporter 1-7; TrEMBL-Plants: tr|K0I855|K0I855_ASTSI Phosphate transporter 5; Found in the gene: LotjaGi5g1v0180700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:46135206..46137010) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCAAGGAGCAAATTCAGGTGCTAAATGCACTAGATGTGGCCAAAACACAATGGTATCACTTCACAGCAATCATCAT TGCTGGAATGGGCTTCTTCACTGATGCCTATGACCTGTTCTGCATATCGCTCGTTACGAAGCTTCTTGGTCGTATATATT ACCATGTTGATGGTGCAGAGAAGCCTGGCACACTGCCTCCAAATGTGTCAGCTGCTGTTAATGGTGTTGCTTTCATAGGA ACACTTTCTGGGCAACTCTTCTTTGGCTGGCTCGGTGACAAAATGGGCCGTAAAAAAGTCTATGGCATGACCCTGATGCT GATGGTGGTAGCCTCCATCGCTTCCGGTCTTTCTTTTGGACACGATCCAAAGACCGTGATGACAACTCTTTGCTTCTTCC GATTCTGGCTTGGTTTTGGTATTGGTGGAGACTACCCACTTTCGGCTACCATAATGTCTGAGTATTCTAATAAGAAGACC CGTGGTGCCTTCATAGCTGCAGTGTTTGCAATGCAGGGTTTTGGAATTTTAGCAGGAGGTATATTTGCAATCATAATTGC TTCTGCATTCAAGGCCAAGTTTGATGCTCCAGCATACGAGGTTGATCCATTAGGCTCAACTGTTCCACAAGCAGACTATG TTTGGAGGATAATTCTAATGGTAGGAGCAATCCCAGCTGCAATGACTTACTACTCGAGAACGAAGATGCCAGAAACCGCA CGTTATACCGCCCTGGTTGCAAAGAACACGGAGAAGGCTGCAGCAGATATGTCTAAGGTCTTGCATGTGGAGATTCAAGC TGAACCAAAAAAGGAGGTGACACAGCAACAAAGTAACTCATTTGGATTGTTCTCTAAGGAGTTCCTCAGGCGCCATGGAC TGCATCTACTCGGAACAACCAGCACATGGTTTTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAGAAGGACATC TTCAGCGCAATCGGTTGGATCCCTTCTGCAAAGACCATGAATGCCCTTGAAGAGGTTTACAGAATTGCAAGGGCTCAAAC TCTTATTGCTCTTTGCAGCACAGTTCCGGGTTACTGGTTCACCGTGGCATTCATTGACAGGATTGGAAGATTTGCTATTC AGTTGATGGGGTTCTTCTTCATGACAGTGTTCATGTTTGCTCTTGCCATTCCCTATGAACACTGGACTCACAAGGAGAAC AGAATTGGGTTTGTGGTGATGTATTCGTTGACCTTCTTCTTTGCAAACTTTGGGCCTAATGCTACCACATTTGTTGTGCC AGCAGAGATCTTCCCAGCTAGATTGCGATCCACTTGCCACGGAATATCATCAGCATGCGGGAAGCTTGGAGCTATGGTTG GTGCATTTGGATTCTTGTACTTGGCTCAAAACCAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCTGGTATTGGTGTG AAGAATTCACTGCTTCTATTAGGTGTTGTGAACATTCTGGGCTTCCTCTTTACTTTCTTGGTCCCAGAAGCAAAGGGAAA ATCTCTGGAGGAGATGTCTGGTGAGCAAGAAGAGGAAGTTGAAAGTTAAACCAAGGTCTAATAATAACCACGGCTTACAT TACAACAATGAAAATAATGTCATAGCCTTAGGTTATGATCATATGTTGCTAGAATAAAGCCTTGTTTTCAATTAGGCGAC TGTGTTATTAAAGTTTTCTAGTCTCAGTTTCTCTCTCTGTATAATTTTTCTGTTATTTTGTCATAGGCACCTGAAGCACT GTATGCTCTATGAATATTGGGCGATATAGATATTTGAATGTGTAG
CDS sequence (LotjaGi5g1v0180700.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAGGAGCAAATTCAGGTGCTAAATGCACTAGATGTGGCCAAAACACAATGGTATCACTTCACAGCAATCATCAT TGCTGGAATGGGCTTCTTCACTGATGCCTATGACCTGTTCTGCATATCGCTCGTTACGAAGCTTCTTGGTCGTATATATT ACCATGTTGATGGTGCAGAGAAGCCTGGCACACTGCCTCCAAATGTGTCAGCTGCTGTTAATGGTGTTGCTTTCATAGGA ACACTTTCTGGGCAACTCTTCTTTGGCTGGCTCGGTGACAAAATGGGCCGTAAAAAAGTCTATGGCATGACCCTGATGCT GATGGTGGTAGCCTCCATCGCTTCCGGTCTTTCTTTTGGACACGATCCAAAGACCGTGATGACAACTCTTTGCTTCTTCC GATTCTGGCTTGGTTTTGGTATTGGTGGAGACTACCCACTTTCGGCTACCATAATGTCTGAGTATTCTAATAAGAAGACC CGTGGTGCCTTCATAGCTGCAGTGTTTGCAATGCAGGGTTTTGGAATTTTAGCAGGAGGTATATTTGCAATCATAATTGC TTCTGCATTCAAGGCCAAGTTTGATGCTCCAGCATACGAGGTTGATCCATTAGGCTCAACTGTTCCACAAGCAGACTATG TTTGGAGGATAATTCTAATGGTAGGAGCAATCCCAGCTGCAATGACTTACTACTCGAGAACGAAGATGCCAGAAACCGCA CGTTATACCGCCCTGGTTGCAAAGAACACGGAGAAGGCTGCAGCAGATATGTCTAAGGTCTTGCATGTGGAGATTCAAGC TGAACCAAAAAAGGAGGTGACACAGCAACAAAGTAACTCATTTGGATTGTTCTCTAAGGAGTTCCTCAGGCGCCATGGAC TGCATCTACTCGGAACAACCAGCACATGGTTTTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAGAAGGACATC TTCAGCGCAATCGGTTGGATCCCTTCTGCAAAGACCATGAATGCCCTTGAAGAGGTTTACAGAATTGCAAGGGCTCAAAC TCTTATTGCTCTTTGCAGCACAGTTCCGGGTTACTGGTTCACCGTGGCATTCATTGACAGGATTGGAAGATTTGCTATTC AGTTGATGGGGTTCTTCTTCATGACAGTGTTCATGTTTGCTCTTGCCATTCCCTATGAACACTGGACTCACAAGGAGAAC AGAATTGGGTTTGTGGTGATGTATTCGTTGACCTTCTTCTTTGCAAACTTTGGGCCTAATGCTACCACATTTGTTGTGCC AGCAGAGATCTTCCCAGCTAGATTGCGATCCACTTGCCACGGAATATCATCAGCATGCGGGAAGCTTGGAGCTATGGTTG GTGCATTTGGATTCTTGTACTTGGCTCAAAACCAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCTGGTATTGGTGTG AAGAATTCACTGCTTCTATTAGGTGTTGTGAACATTCTGGGCTTCCTCTTTACTTTCTTGGTCCCAGAAGCAAAGGGAAA ATCTCTGGAGGAGATGTCTGGTGAGCAAGAAGAGGAAGTTGAAAGCACCTGA
Protein sequence (LotjaGi5g1v0180700.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVSAAVNGVAFIG TLSGQLFFGWLGDKMGRKKVYGMTLMLMVVASIASGLSFGHDPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKT RGAFIAAVFAMQGFGILAGGIFAIIIASAFKAKFDAPAYEVDPLGSTVPQADYVWRIILMVGAIPAAMTYYSRTKMPETA RYTALVAKNTEKAAADMSKVLHVEIQAEPKKEVTQQQSNSFGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDI FSAIGWIPSAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYEHWTHKEN RIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISSACGKLGAMVGAFGFLYLAQNQDKSKADAGYPAGIGV KNSLLLLGVVNILGFLFTFLVPEAKGKSLEEMSGEQEEEVEST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 19 | 19 | - | – | |
PANTHER | 5 | 520 | 516 | 0.0 | – | |
PANTHER | 5 | 520 | 516 | 0.0 | – | |
TIGRFAM | 11 | 515 | 505 | 2.7E-227 | ||
SUPERFAMILY | 12 | 513 | 502 | 8.76E-62 | ||
TMHMM | 20 | 42 | 23 | - | – | |
Phobius | 20 | 49 | 30 | - | – | |
ProSiteProfiles | 24 | 506 | 483 | 31.646 | ||
CDD | 25 | 505 | 481 | 0.0 | – | |
Pfam | 26 | 513 | 488 | 2.4E-48 | ||
Phobius | 50 | 68 | 19 | - | – | |
TMHMM | 69 | 91 | 23 | - | – | |
Phobius | 69 | 88 | 20 | - | – | |
Phobius | 89 | 99 | 11 | - | – | |
Phobius | 100 | 119 | 20 | - | – | |
TMHMM | 100 | 117 | 18 | - | – | |
Phobius | 120 | 124 | 5 | - | – | |
Phobius | 125 | 142 | 18 | - | – | |
TMHMM | 132 | 151 | 20 | - | – | |
Phobius | 143 | 162 | 20 | - | – | |
Phobius | 163 | 190 | 28 | - | – | |
TMHMM | 164 | 186 | 23 | - | – | |
Phobius | 191 | 212 | 22 | - | – | |
Phobius | 213 | 231 | 19 | - | – | |
TMHMM | 213 | 232 | 20 | - | – | |
Phobius | 232 | 347 | 116 | - | – | |
TMHMM | 342 | 364 | 23 | - | – | |
Phobius | 348 | 365 | 18 | - | – | |
Phobius | 366 | 370 | 5 | - | – | |
TMHMM | 368 | 390 | 23 | - | – | |
Phobius | 371 | 390 | 20 | - | – | |
Phobius | 391 | 401 | 11 | - | – | |
Phobius | 402 | 421 | 20 | - | – | |
TMHMM | 403 | 425 | 23 | - | – | |
Phobius | 422 | 440 | 19 | - | – | |
TMHMM | 440 | 462 | 23 | - | – | |
Phobius | 441 | 462 | 22 | - | – | |
Phobius | 463 | 482 | 20 | - | – | |
TMHMM | 483 | 502 | 20 | - | – | |
Phobius | 483 | 502 | 20 | - | – | |
Phobius | 503 | 523 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Inorganic phosphate transmembrane transporter activity | Enables the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
Biological process | Phosphate ion transport | The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0180700.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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