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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0194000 |
| Transcript ID | LotjaGi5g1v0194000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTP binding protein gamma subunit; TAIR: AT3G22942.1 G-protein gamma subunit 2; Swiss-Prot: sp|Q93V47|GG2_ARATH Guanine nucleotide-binding protein subunit gamma 2; TrEMBL-Plants: tr|I3T376|I3T376_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0194000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:48861281..48866663) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATTGAAATCTCAAAAGAAAACAAGCTTTTCCCTGCACTATAAGTCAAAACAAAAAACAAGACAATTTCAACATCA TCAAGACATCAACACTTGATTGAAAGTTAAAACCAAGTTGTCCTTTTTAGTGTTTTTTTACCCCAACTCTGCTCCACTCT GAATACTTCAAACTTGGGAACATCCAACACAAAAACCAGAGTTTCTTTCTCTCAATTCTTCACCAAACACACACCTGCTA CCTGTCTCTGTCTCTGTCTCTGTGTTTGAAGTACAACCAAGTTCAGATCCTGGTCAGTTGTTTTCAGAACCAACCTTCTT CCATGGCCAACAACACTTGATGGGGTCCATGAAGACTTCTGGGTCATCCTTGTTTTCGTCAAACTTGGAATCTTCACACC TATTCACCTCTATTTCATAGCCTTTTTGTGGTTGAACAACTGTGTGTGTGCAAGCTAAGGATTTTCCATTCCCACCATAT CTCAGCCTCAAAAAATGCAATCAGGTGGGCCTGAATCAGAAAACCCCATGACCGAACGGGCTCAGTCTCTGTCTTCTGCA GATACAAGAGGGAAGCATAGGATACATGCAGAACTGAAGCGGTTGGAGCAGGAAGCAAGGTTCTTAGAGGTAGGTACTTC AACATCAATTCTTCATATTGGAGTTTTGTTCTTTGTGTGTGTGTCGTTTTATTGTTGACTTTTTTACTTTTTGATGGCTT ACATTTTATTCTACTTTTGTTATCCAGAAATGGTAAAATGTGTTGGGGAACTTTTACTCTTTTCTTCATTGTTGTGTGCT TTTGTTGGATAAGTTAACAACTTAGTTTTGTTTTTTAGTTGATTTGAGTTTGGTTTATGATGAGCATGAGCAAAGACAAT TTGGGAAATTAATGTTCAGATAGTATATGTACCTGTTATCGTGGTCCTATAGTTAAAAGAGTAGTTGTTTTACTAAATGC AGCCTATTTTTCTTTTTTACTAAACTAGTTCCTTCAAAGATTTGGGACATTAATTCAGTCCTCTGAACATTTTTGTCACT AGATTAGTCTTTCAAATATTTAAAGTGACATAAAAAACTATTCAAATTGGTGTCATGAAGAAACATTTTGATGTATCTTT TGGAATACAAAAATGGCAGTTTGATCTTTTACTTTCCCCCAATGTATTTTACATAATCATACTGTCTTGGTGCCTGAAGT TTCTTCACTGTTATATATGGTTTTAAATTGTGGTCCGCAAGCGTAATTGCTGCCACGACATTCACAATCGCAGTCCTATA AGCTGTGTTTATATGTAGTTTTCTACAGTGTCAAAGATTGCATCGCAACTGCTATTTAAAAGCTTGCTGTTATGTTAACT GAATTCAGGTTATCAATTATGCTCAGTGAATAACTTAGCTGGTTATTTTGTCTTGAGAAAGATGTATGTACATTTCAGCT GAGGTTCCATCCTCTACTTCTCATGAATCCTCAATTAGGAAGCTCCATTTTGCTATGATGATGTGCAATTATGAGTATTA ATCTGTCTAAATGTGTTGTCAACAACTATAGAAGCTTGATGATTTAAATGATATAACTAAAAATATGATCCTATTTAGAC ACCCTTACCTTTGTCTAATCTTACCAAGCTAAAACCTCTCAATATAGGTGTGGAGAAATCTAAATCATCAGATTGGGGGT TTGTCAAACAGACTGAATCAATCACTACAATGACTTTTTGAGCATTCTGTGCCTTTAAGGATACACAATTAAGCAATTAC TATTGATGTTCAAAGAATTAGCAAGATATCCTGTGCTGTTATCTTCATCAACATTAATTTCCCCCCTCTGTTTTTGGTGA TTTTCCATTGATGACTAATCTTGATATCGGGCCATTTGTAAACTATTAGTTAAAAAGCAGTTTTAAATACTATTATCTTG TATGACGAAAGTTTCAAGTTGGGGAATATGCTATTAAATCCTTACCTACTTGACATTATTCCATATCCAATTATCCATCA TGAGGCTGATTTCATATATTGAGGAAAGAGCAAGCTTTAATTTCTCATATATGTAGGCTGATTTTTCTGTTGCTTTCAGA ATATCCTAAAGTAGTTGACTATGTAGATCACTAGGAGGATTTAATTTTTTTTGGAAATACATGAGAAACTGCTTCCAGAA GCTTTTTGTTAAAGAGTCTTCTTTACTGAATACATTGTTTGATTATTTTCCCTCTTGTTTTCTTAGTTTTCAGGTAGAAA TAGAATGGATGTGAAAATTTTCAGAACATAAATCTATTTGCTGTGTACTTATCAAAAAGATATAAGTTTCAGAATACCAT GCGAAACTTAGCTTCGTAATCCGGTCAGGATAAATAGGCATATGTGCTTGCTGCCTAAAGAGAAAAAAGGGTTATTGTAG CACTGGATGAAAAGAGTGGTTGGAACCTCTACTAGATGGTCTTATCCACATTACCTTCTTATTTCCTCCTTTTTCGTGGA TGGTGGGCTAAAATACAAGCGTGGCTGGGATTCCATTCTGGAATCAATCTGTCCCCAAAAGTGATTCAAGTGCCATTCCC ATTTGAACCAAGTCTCTTGGGGGTTCTGTATTGCCTTTTTAGGTTCTCTATCACTATGCTCATATTTTCAGCGCTCTGTG GGAATAAATTGCTTAGTCATTTTGCACTGCTTGTACTACTATGCAAAATTTTTGGAGATCTAGGGAGCCATGTGGTAAGC TTTTCATAGGGAGGTTGATTGTGGTTCTAAGCCTTTCTTTTCGATGACATATATTTAATTATCGATTTCTTACTAGTGCT ACATGTGCTGTAGGATCGAAAAAATATGGTGACGAGACGAGGGAACACTTAATTTATTACACACATAATATTTTTAGCTT TATTCATAACCATATTACATACACTCAACTAACACAACTCAAGCTTGCTGAAGCTTACTTAATTTTTTTCTAACCTTTCT CTCTTCAGTGATTCTGTTTGCACCTTTTAAGTGCTCAGATATATGAACCTGGCACACACTCAACACACTACAATTTCTCT CACACACATGATAACTCGCTGGAGCCTTTCTCTGATTTTTCTCTCAAGCTTTGTTTCTTACTCGTCTCACAACTTACATG TATTACAACAAGCTGTATAGTATATCCTATTTATACACTTCCAAGTTGGGTCTTTTGATACCACGGCCATATTAAACTCT AGAGCTAATGACTATAGTAAGGAACCGTGTAAAGCTAGCTGTCCAACTTAATAGTTAAGTTCTGACTATGTGCTATAGAA CCAAGTTTAACTTCCAACATGTGCTTTAATATTCACTGTAAAATTAATGCAGGAAGAGCTGGAACAACTTGAAAGGATGG AAAAAGCATCTACATCATGCAAAGAGTAAGCTCAAAAACAAAGCAAGAAAAAAAAGATTCTATCATATATAATCAATGTT AGTGATTAACCAATATTAACTTAGAATTTCCATCCTGTGTTTTGTTTTGATAGAATGCTCAGTAATGTGGAAACAAGGCC TGATCCTTTGCTACCGTCGTAAAATCTCTTCTCAAAACTTTCTTTTTTGCATCACATGTTATGTTGGATATTTTTACAAA GGGCGCATTTTTCATGGTTTTACAGAACAGTTGGTCCCGTAAATCCTGCATGGGATCGATGGTTCGAAGGCCCCCACCAA GATTCCAAAGGCTGCTGCAGATGTTCGATTCTCTGATGATCAATACCCCTACCCTCTCTTTTTATCCTTAATCCCAGATT AGAATAGGAAATTTGTGAGTTTTGAAATTATATTGTTAATTGGCATTTTTTTATGAAATGTTTCCTTGTTCAGATGACAG TCACAGCAAATACATATATTTTATGTTTCAGATAACAGCTTAACTGCGCAGATGATGATTACTAAACCTTTGTCAATGAT AGTCAATACTCAATAGTCATAGAACATTTTTCTCTCTCTTCGTTAAGTGTACGGTATTTAAACATTTTCGTCGAGGTCCT ACCCAGCTCGAACCGAATTGCCTCAGTATAGGATACCAGTGGTTTAAAATGTCGTCCAACTTTTAATGGACTGCTGGAGC GTCTATTGATTCATGATCATGACCATCAAAGAAGTTTGAATGAAGACCTGCAGGTAACGAATCAAACTTGGTATCGTGGG TTCTTTTAATGAGTATGTTTGTATAAAGTTTTATAGATGATGAAATAGAATTCAGGGAGAAATTAAAGAACGGAATGATT AATTTTCTTTGTTTGAAGGTTGTATAAGAGAAATGTTAATGTAACCACAGAGAACCTAGATCAATTGGTGCAGGTTGATT TAAGTTAACAGTTAACTAGAAAAATTCTCATATTTGAGGTATAAGGCTGTAGTAGGCTCAGAGGGAGAGCTTTTGCTACT CTCCTCGAAAGGGTACTGATTTGTACCAGAGTTACCAGGATCCTGTCAACGGAGAAGGAGCCTCCATTAAAAACAATACA ATTCCAAGCCTCCTACAAGACATACACCAGCATGATAAAGAGCTCCAGCACCTCTAGATCATATCTGAGAAAGAAATGCA GTACAAACTCATGAAAAGTGAAAGGAAAATCAAGACGCAACCCCAACGAAGGTGCAAACCATAGTCTCTTCACCACTTGA CAAAACAGAAGAATGTGCTCCACTGTCTCAAAATCAGCACCACAAACTGGATGTATAGCTTGGATCAAGGTCCATGCCAC GCCATTGTAACACACTAGGACAAGAAGAAAATTGGAACAGGCTGGCCACACAACCTCCTTACAGTGAGAGAAGGCTGTCG ATTTCCAGATTAAGTTCCATACACTCACAGGCACAGAGAGCCAGAGGACGAGGATGGGAGCTCATACCCAAAGCTATAGG CCTGGAAGTGTACCAACCATCTGAAGTTTCAGGCAGAAAACCAGATTTTCACACATCTGATATGGAAGAGACACGCTTAA AATTTGAGAGGCCGAAGGTGGGAAAAAAATGGATTCAACAAGAGGAACGTTCCAACTTCCATCCACCGTGAGCATGCATT AAGTCCGCGACCTGCACAAGCCTAGGCTCCTCCAAATATTAGTCTTTAAGCCTTTGCTAATTCTCCAAGCTCCTCCCATT TCTAACATCCACCTAGCCTTCAAGATATATGCTTGGTCTATAACTTCTTTTAGCACTAAAAAGGTCATCGTAGGAAAAAT AGTTCGCTTTGAAAATCTGGCTAAATAGAGACTCCAAAAAATTGAGAATTCTCCGCGAATTCTTAGAACAAGAGTCAAAT GAAAAGATTTAAAATCTTTGAAATCAATACCCCATTCTGTTTTAGGGTGACACCAACTCTCCCACTTTGCCCGATGCAAG CTCTTTCCAATAACATCTCTACC
CDS sequence (LotjaGi5g1v0194000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATCAGGTGGGCCTGAATCAGAAAACCCCATGACCGAACGGGCTCAGTCTCTGTCTTCTGCAGATACAAGAGGGAA GCATAGGATACATGCAGAACTGAAGCGGTTGGAGCAGGAAGCAAGGTTCTTAGAGGAAGAGCTGGAACAACTTGAAAGGA TGGAAAAAGCATCTACATCATGCAAAGAAATGCTCAGTAATGTGGAAACAAGGCCTGATCCTTTGCTACCGTCAACAGTT GGTCCCGTAAATCCTGCATGGGATCGATGGTTCGAAGGCCCCCACCAAGATTCCAAAGGCTGCTGCAGATGTTCGATTCT CTGA
Protein sequence (LotjaGi5g1v0194000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSGGPESENPMTERAQSLSSADTRGKHRIHAELKRLEQEARFLEEELEQLERMEKASTSCKEMLSNVETRPDPLLPSTV GPVNPAWDRWFEGPHQDSKGCCRCSIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 107 | 107 | 4.1E-49 | – | |
| PANTHER | 1 | 107 | 107 | 4.1E-49 | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| Coils | 27 | 64 | 38 | - | – | |
| SMART | 31 | 107 | 77 | 1.1E-18 | – | |
| Pfam | 33 | 103 | 71 | 2.0E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | G protein-coupled receptor signaling pathway | A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576). |
Expression pattern of LotjaGi5g1v0194000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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