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LotjaGi5g1v0196200.1

Overview

Field Value
Gene ID LotjaGi5g1v0196200
Transcript ID LotjaGi5g1v0196200.1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase, putative; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|O22309|7OMT9_MEDSA Isoflavone-7-O-methyltransferase 9; TrEMBL-Plants: tr|I3SDH2|I3SDH2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0196200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:49187966..49190821) extracted from Lotus japonicus Gifu genome v1.2.

ATATGAGCATACGATTTTCCTCCGGCATTCATCGGACACGTACACATTTTAATTGTGGTTTTTAACCGCTTCAAACTTTA GCGCCTAGCCTATAAACCTCCCGTGTGTCTGAAAGGGTATTAGTGAAAATGTATTTTGCAATATGATTTCTAAATCAAAA CCACACCTTACATCATAGGAGGAATAGTCAATAAGCCATGCGTCACATAGAGGTTTGAAAACTGGAAACACAGTTATAAA AGCAACTGCATCTCATGTGAAACAAATCGAACCAGCTCAATTGTTAAACACATATCATCCCTTGGAGACTTGCAGTCATG GGTTCAGCCAATGGCCTAGACGCATCTGAACTCTTTGAAGGCCAAGCTCTGTTATACATGAACATGTTTGGCTTCCTACA AACCATGTCTCTCAAATGGGCTATGCAACAAGGCATAGCAGACATCATATACAACCATGGCAAACCCATCACTTTCACTG AGCTGGTCACAACCCTGCAAATTCCACCAGCCAAAACCAGTTTGGTGAAGCGACTGATGCGATTTCTGGGACACAATGGA ATCTTCGCGATCGCCGGCGAAGAAGAAGAAGATCATGAAGCATATGATCTCACCCCTGCATCAAAGCTTCTTATATCAAA GGCGGCTCACGCCGGCCGGTCCGACCCCTGTTTGGCTCCGATCATTCGGATGTCGGCCGATCCACTTCTGATCAACAAGT TCCATCAGCTGGGGGAGTTTCTTTCCGGCGATGTTGAAACTTTGTATGAGGTCGCCTATGGGAAACCTGTGTGGGGATTT CTTAAGGACAACCCTGAATATCAGAGTATTTTCAATGAGGCCATGGCAAGTGATTCTCAATTGGTTCACTTGGCGTTGAA AAACTGCAGTTCTGTGTTTGAGGGGCTGGATACCCTTGTGGATGTTGGTGGTGGGACAGGAACTACGGCCAGGAGTATTT GTGAGGCGTTTCCTAAGTTGAAGATTGTTGTTTATGATCTTCCACAGGTTGTGGGGAACTTGTCAGGAAGCAACAATTTG AGCTTTGTTGGTGGGGACATGTTCAAATCTATCCCTGAAGCTGATGCAGTTCTGCTTAAGGTACATAAAATCTATTTAGA CCATAGTTCATTTGTTGATTTATTGCCGTACTTAACTCTCGGGACTGACTTACATTGGAACACACTTAATGATTAATATT GCTTTTTTCCAAGTCTATTTCTTTTGTGGTTACATTACATCACATCTATCACTTATATATCTTTCATCTCTTATATATTT TTTCTAGTGGTGTACATTCAAATGGAATACACGAATCTTTATTAATATTGAAATTATAATCCTTCATGCATCTTTACTAT TGGTGTCTTATTTTCTGTCTCACCAATCAAATTGTAACACGTGCAACTAAAAAAAGATATAAGTATACCAACTATAAACT TAAACAAACTTAAATGAGCTGTTTTGAGTAACATTACACAATTTGATTTGTGACACAAGTATGAGGATTGATTATTTTAG ACCCTTATGTTGATTTGATTGAGGGGAGCTCTCTTATATCATCATCAACTTATAGCAGAGATCTTTTTATCTTTAAACAC TAAATGAGAATCTCAAAACTCATTATTATTTATTCTAATATGTCATTTATTACGCTAAACAATCAATTGGATAAATATGT GACCGCAACACTCTCTTAGAATGAGAATTGAATTCTTCCCAATCAAAGCAATCATAAATTCATACATTTAAGTAATATAA GTCTTTCCGTTTAAGATTAGACGATACATATTTTTTATCAAGATTGAACGAGTTAAATAAATTAAAATATGAGTTGTTGA ATTTTGATTAAGGTTAATTGACTGTGTGAATTTATGATTTTTTTTTTTACCGCAAGGATTCCAAACTTCTCATGAGGAGG TATGGAAAAGTTGTATGGCTCATGGAATCAGTAACATTGTTCTTATTGTTTATTTTTTTTCAGTGGGTTTTACATGATTG GTCAGATGAAGTTTGCATACAAATTCTGAAAAACTGTAAGGACTCTGTTTCAAGGAATGGGAATAGAGGAAAAGTGATTA TCATGGATATAATAATAAATGAAAAGGAAGATACCCAAGTTATGACTCAAACAAAGCTTTGTATGGATTTAATCATGATG GGGATTAATGGAAAAGAGAGAACTGGGAAAGAGTGGAAGCATCTCATCAAGGAAGCAGGGTTCAAAGACTACAAAATATT TCCCTTCTTTGGTTTTAGGTCTCTTATTGAAGTCTATCCTTAGACATTGTTATGATCCTTTGTTTTACATGTTTATGAAC TGAATAAAGTTGTTAAGGCATAGTGGTTATTGTGTACGAATTTCTTCATCTCCCTATTAGTCAAAATTTAATTGAATAAA ATTGAGATAGGATTAAGGCTCTGTTTGTTTCGGCTTAAAACGTAAGTGACTTTACTTTTAAATAAAAATTATTTTAATTC AAGTAAATATGAAAAGTAGAAATTCATTTAGATTTTTTACAAATATAATAAGTGTTGGGGATGTTTACCAAATCAGTTGG GTGAAAATGGGCCTATGAAATGAAAGAAATTGCTATCCTGACTTAGACTTTTTTTTTTGTGCTTCGGAAAAAATCCTGAC TAGACTCTTGTTCTTCAAAGAATTTAATCTTTACAAAGTTGTGATCGAAACTGACTCATCATTTATGGTCGAATGGGTGA ATAATGAAATAAATCGCCATTGAAAATTGTTGAACAACCTAAATCGAGTTGACTTGTTGTGGGGAAAACATGGTGGTGTT ACGGTTAAATATAATTTTAGCTAGAGAGTTATATTATTTGGCAAAACAAGGAATGA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0196200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTCAGCCAATGGCCTAGACGCATCTGAACTCTTTGAAGGCCAAGCTCTGTTATACATGAACATGTTTGGCTTCCT ACAAACCATGTCTCTCAAATGGGCTATGCAACAAGGCATAGCAGACATCATATACAACCATGGCAAACCCATCACTTTCA CTGAGCTGGTCACAACCCTGCAAATTCCACCAGCCAAAACCAGTTTGGTGAAGCGACTGATGCGATTTCTGGGACACAAT GGAATCTTCGCGATCGCCGGCGAAGAAGAAGAAGATCATGAAGCATATGATCTCACCCCTGCATCAAAGCTTCTTATATC AAAGGCGGCTCACGCCGGCCGGTCCGACCCCTGTTTGGCTCCGATCATTCGGATGTCGGCCGATCCACTTCTGATCAACA AGTTCCATCAGCTGGGGGAGTTTCTTTCCGGCGATGTTGAAACTTTGTATGAGGTCGCCTATGGGAAACCTGTGTGGGGA TTTCTTAAGGACAACCCTGAATATCAGAGTATTTTCAATGAGGCCATGGCAAGTGATTCTCAATTGGTTCACTTGGCGTT GAAAAACTGCAGTTCTGTGTTTGAGGGGCTGGATACCCTTGTGGATGTTGGTGGTGGGACAGGAACTACGGCCAGGAGTA TTTGTGAGGCGTTTCCTAAGTTGAAGATTGTTGTTTATGATCTTCCACAGGTTGTGGGGAACTTGTCAGGAAGCAACAAT TTGAGCTTTGTTGGTGGGGACATGTTCAAATCTATCCCTGAAGCTGATGCAGTTCTGCTTAAGTGGGTTTTACATGATTG GTCAGATGAAGTTTGCATACAAATTCTGAAAAACTGTAAGGACTCTGTTTCAAGGAATGGGAATAGAGGAAAAGTGATTA TCATGGATATAATAATAAATGAAAAGGAAGATACCCAAGTTATGACTCAAACAAAGCTTTGTATGGATTTAATCATGATG GGGATTAATGGAAAAGAGAGAACTGGGAAAGAGTGGAAGCATCTCATCAAGGAAGCAGGGTTCAAAGACTACAAAATATT TCCCTTCTTTGGTTTTAGGTCTCTTATTGAAGTCTATCCTTAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0196200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGSANGLDASELFEGQALLYMNMFGFLQTMSLKWAMQQGIADIIYNHGKPITFTELVTTLQIPPAKTSLVKRLMRFLGHN GIFAIAGEEEEDHEAYDLTPASKLLISKAAHAGRSDPCLAPIIRMSADPLLINKFHQLGEFLSGDVETLYEVAYGKPVWG FLKDNPEYQSIFNEAMASDSQLVHLALKNCSSVFEGLDTLVDVGGGTGTTARSICEAFPKLKIVVYDLPQVVGNLSGSNN LSFVGGDMFKSIPEADAVLLKWVLHDWSDEVCIQILKNCKDSVSRNGNRGKVIIMDIIINEKEDTQVMTQTKLCMDLIMM GINGKERTGKEWKHLIKEAGFKDYKIFPFFGFRSLIEVYP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.10.10
2 105 104 1.9E-30
IPR036388
PIRSF
PIRSF005739
2 360 359 2.2E-116
IPR016461
PANTHER
PTHR11746
9 360 352 1.5E-139 –
PANTHER
PTHR11746:SF229
9 360 352 1.5E-139 –
SUPERFAMILY
SSF46785
10 107 98 3.95E-24
IPR036390
ProSiteProfiles
PS51683
20 360 341 76.368
IPR016461
Pfam
PF08100
30 77 48 3.5E-15
IPR012967
Gene3D
G3DSA:3.40.50.150
114 360 247 9.8E-81 –
SUPERFAMILY
SSF53335
116 359 244 4.06E-55
IPR029063
Pfam
PF00891
141 342 202 3.6E-55
IPR001077
CDD
cd02440
199 299 101 7.86697E-4 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0196200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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