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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0202500 |
| Transcript ID | LotjaGi5g1v0202500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification superfamily protein; TAIR: AT2G18196.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|F4IQG4|HIP30_ARATH Heavy metal-associated isoprenylated plant protein 30; TrEMBL-Plants: tr|A0A151U5Q4|A0A151U5Q4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0202500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50269157..50274380) extracted from Lotus japonicus Gifu genome v1.2.
GAATTTATACTCTTTTTCGTACATGTGTTGGTTTTGCCTATATATGTGAAAGAGTGGTATATAACTCCAGATTGATCATT ACAAAACATTATCATTCATTCATTCGAGATATGCAAATGGAAGAAGGGAATATATTCCATGATGGTTGGTTTCTTCCATA GGTGTACTTCCTTCTTTGCTTCTTAATTAAATTATATATCTACCATGACTTCCCTGCTAGAGAAAACTTTGGGCTCTGAA ATCTCTTCCTTTATATACCGCTGTTGTTTTATCTATCAAGACCATCACCATCATCATCATAACAATAAGAGCCTCAAAAA GAACTTCAACATGGGGAAGAAGAGTAGACCACTTTCCTTGCAGGTTAATTTGCTTTTAGTATATATATGCATGGTTGTTT TTCTCTAATGTTAATTTTCTCCTATGTTATTTATTGTTTGATTTTTCTTTGCCATGATTCAGCTTTATTTGAAAAAAAAA TAGCAGTTTATTAGAATTTTTTTAAAATTAAATTAAATTTTTCTTTTAATATAATCTGAAAAAAATAAATGCATTAATTT GGTCCCCATATATTAATATCTCCTTTGATTTTGATAAAAATAAATAAATGGTGAAGAAAATAAAAATAAAACGACAAGCC AATAATCTTTTTTTTTTTTTTTTTTTTTGACAAGCCAAAGAAAAGATGCATAAAACAGCACAAGGTGTGCAAGAAGAAAG TTTACAATGTTCATGACCCCCATGTTCTAATAGCATTAAGAACCACAGGCAGCCAAGGAAAAAACGAAAAACATAACAGA CATAGCATGCAGAAGGTTTGCAGTGAGCTATACTAATAGCTCATCACTATACAATAGCACCAGCCCATTTGTAGGACATC CCTTAAGGCCAAGGAAGATATAATTATTGTAAATCTTAGCTCCCCATCATACAGATCAGAGGCTCCTTGTCCCACTCGTA GAAAGATGATTTGAAACTTTGCATCAAAGATTTGAGCCACAACCAAGACCTCAATTTCACCATATCCACTACCTCTTCCA AATTTACTTGTTCGCCTTTGAAAGCCACTGCATTCCTGTGAATCCAAATGCTCCAAATAACAGCAAGCCAAATTGTTTTC CAGCACAACCTTTGTTTTTTGTTTCTTCCCCAAATTTCATGATGCGCAAGATGAATGTTATGGTCAATTGGTAATACTGT TTCCACCCTTAACCATGCATAACAGCTCATCCATATCCTATATGAGACATTGCATCCAAAGAAAAGATGTCCAGCACTCT CCAACTGCTGAGAACAAAAGAAGCATGCACCATTTCTATTGCTGTCCACAGCCACTCCTCTCCTGAGTAAATTATCCAAC GTTGGCAGCCTTCTGAGAGCAACTCTCCACACAAGGCAAATAACCTTGGAAGGAGCCAAACCCTTCCACAGCTCCTTGAA AAAAATGTTGCTGTCAACATGAGGGAATTGAGCCAAGTATGCTGATTTCACTGAATATCTCCCCTCTAGTTCACACTTCC AGAGCCATGAGTCCTTCACGTTCCTCTGAATCTGAACTGAAGATAACACCTGCAGTAAACTGTCAAAAATATGCTGCTCA TGCACGAACAGATTTCTCCTCCACCGCAGCTTCCAATCCCACCCAGCCACCCCCCATTCCCCCATCTCAGCCACTGTTGA ATCCTTTTGCACAGACACATTGTACAGCCTATTAAATTTCTGTTTTAGACACTCATCCCCAACCCAACACTCTCCCCAAA ACCCCACTGAACTTCCGTCCCCCACTACCCTCTTTATATTTTCTTGTATCCAACCCCCCCTCTCACTGCACTCCCCTATA ATCCCTAGATCCTTCCACCAATTTGACCCTTTCCCAAAACATGACTCTTCGCCAATCCATACTTTAGCCCCATATTTCGA CCCGATGACCCTTCCCCACAAACTATCTCTCTCACTCAGCAACCTCCACCTCCACTTACCCAACAAGGCCCTATTAAACG CTACAATGTCTCTCACCCCTAAACCTCCCTGATCCTTTGGCCTACACACCCTATCCCAACTTACCCATGGAATTTTCCTC ACATCCTCACTTCCCCCCCCCCCACAAAAATCTTCGCTGCAACTTCCTGATATTATTAGCAACAGACAATGGAATTTTAT AGAAAGATAGATAAAAGTAATCTTGTTAAACACGGAATAGAAGAGTGAAAAAGTAACTTTTCAGGTGAGTACACATGAGA ATATAATTTTTTTATTGGGTTTAGATCGATGCAATGTCCATATATAACTACAATTTTCCATGATAATATATAAAAATCAT TTCGTTCAAAAAAAAACCATCAATATAATGAAGGATTTTTGTTTTCTTTTGAGAGTTAGCAAGCCAATTTTTTTCCTGGC CAATATTATTTTAACTATTTGTTAAACAAAATATAGGTAAGCCAATATATATTTTGATCATTTGTTACCTTTTAATTACG ACCATTCATGATTAAATCTAACGGTTATAATTTATTTAAAAATATATTTTCATAAGATGCATGCATCTCATATATTTTGT TAGAGGAAATTAAATTAACTTCATGCAAACTGAAATGGTATCTCATAATGCATATTTGTTTCAGACCGTTGAGCTGAAAG TGAGGATGTGCTGCAAAGGTTGCGAAAGAGTTGTCAAAAACGCCATTTACAAGCTCAAAGGTACTTTTTATTTTTTGGCT TAGGAGTTAGGACTCACTAAGTGGGTCTCATTTGCTCGACTTCTTTATATCATCCTAAACAAATATGAGGTGAAATTATT GTAGCACTTTAAGTAATCAAGTAGTAATATTTTGATATATGTTTTAGGAAGTTTTAGCTTTTCGTGTTAAAATATTATTA TGCCACTTGAAATAAGAATAATTTTATTTCATATTTATTTGAAGTTATTTAAACTATGTATAATATTCATCTTCAAATGA GATTGAACAAGTGTTCATATTTCACTTCACTCAAATCAATCCCATTATTCCATTCTACTAAGTGGATCGACCCTAATAGA GTCTAAAGAAGATTCGGGATAAAATAATTGAAATGATGTAGGATGGAATCTATCCTTAAGTTTATATACTACCACTATTT TTGTTACATTTTTTCATTTGCCAACACATGTGATGAAATGTCGATATTTTTATTTGTCCGACATAGTTAATATGACCATA AATCAATATAAAGGGTTGTTAGGCATAAATCCCCGCCCCCTCTTAAACTATATAAAAAAAGATAGAATCTTATCTTGATG AGTTTGACTGGTTCATACACGCATAAACTTTCATGGATACGTATCTTTTTAGGTGGCCAAAAGCTATATTATATTAATTG ATGCATTTTAATCATAATAAATTATTTGTTAACTATATTTAATATTATCGCATGCATAAATACAATTTTAGTATATAAGG ACAATATTGCTTTTGTTTTAGTTCATCTCTAAGAAAAAAAAAGTCTTCCTATGAGTTTAATTTGTAACTTAGTTTGATGT CATTTTAAGTCTTAAATGCCATGTCGGAAATAAGGCTTAGTTAGTCTTCCAGGCTTTTTCGCCTTCTCTGTTTTTTTCTT ACTTTCGTAATCAAAATATCATTATAACCGATACTTCTGAAACTACACAATTATCGCATTAAGTGGTAAAGAGCGAACTA AATATTTTTTTGGTTGCTGTAGTACCTTAAGCCAGATTAAGATGTGGTACCCAAAATGAGTCGGTTCAATAATAAAAATA CTCATGTATTGGTTAAAATTTTGATTGTGTCCTATCGTAATAATGCAGGGTTCCATTATTAGGGACGTGAGATTTGGAAG TTGTGTTTTCTGAATTTTTTGCATCCATCAACCATGGTCATTTTACGCGCATTTCCATTGTCATTATTCATTTCCACCAC TCGTACATTTTTCATCAAAAAATGAATTTCATGAGATAAAGTTAATTGACAAGTAAAGTAAAATCTAAATATGTAGTATT TACCTTGAATAAAATGATAATAATCTATAGAATTACTTAATGAGGTACCATACTCAAAAAAATTTAAGGGTACCACATAA TTTACCTATTTGTTTTTCATTTATAGAAATTAACAATTGAACTTCAACCACTTGTTTAATGATAAAGTGTGTTAAGCTAC TACATCTTCTTGTTCTAGTGCTAACGAACAAAAAAAATTGACCCATTTATCCTATAATTAAATTCATGAATTTGGATTTT CCCCTGTTCTGTAAAATTAAAAAATGGTTTTGTTGAAGAGAAAAAGACAAGTTTTTAATAGGATTAGTGGATCACATAAC CCATCACGATCAATTTTTAAATAATAAAATTTATACCATTTCTCTCTAAGAAGATTATATCCTGTTATTAAATTTGATAC CGCATATCTCTAGAAATTCAACCCCACTACCATTCTTTTTTTTATACCATTTCTCTTTAAGATTTTTCATTCCTCACGCT AAATGCACATACTCCGACTGCATTGCCAATAAGTTACCCCCCACTTCTTCCTAAATGATGTCATCATGTATGATTAATGT TTATAATATGCTGTTTTTGTTTGGTAGGCATAGATTCAGTGAATGTGGAGTTAGAGATGGAGAGGGTGACAGTTACCGGC TACGTTGAGCGGAACAAGGTGCTGAAGGCGGTGAGAAGGTCAGGGAAAAGAGCAGAGTTCTGGCCATACCCAAATCCACC ACTTTACTTCACATCTGCTAACAATTACTTCAAAGACACCACAAGTGAGTTCAAAGAAAGCTACAACTACTACAGACATG GCTACAATCTCCCTGAGAGGCATGGCACCATGCATGTGTCTCACCGTGGAGATGACAATGTTAGTAACATGTTCAATGAT GATAATGTTAATGCTTGCTCTCTCATGTAAATAGTTAATTAACCCCTTGTTGTTAATTATTATGTGTGTATTGCTATTGC TAGCTACCTGCTAGGAGTGAAACTCTTATGATCAGGATTATGTAAATTAATTTGCAGTATTAATTGTGTGATTTATGAAA GCTTTGGGCTTTTGTAAATTTGACTTTTATATTTTATAATTTAACTTCCACTAATGTAAAATATTATGTGAGGTAAAGAA TAATACAATACTCCGCTCAACGCGTGGATTAACTTATGTGAGAGTTGTTCTATATTATTAAACAAAAGTCTCTTGATGTT AAAAAAAGGAATAATAAAATATGG
CDS sequence (LotjaGi5g1v0202500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTTCCCTGCTAGAGAAAACTTTGGGCTCTGAAATCTCTTCCTTTATATACCGCTGTTGTTTTATCTATCAAGACCA TCACCATCATCATCATAACAATAAGAGCCTCAAAAAGAACTTCAACATGGGGAAGAAGAGTAGACCACTTTCCTTGCAGA CCGTTGAGCTGAAAGTGAGGATGTGCTGCAAAGGTTGCGAAAGAGTTGTCAAAAACGCCATTTACAAGCTCAAAGGCATA GATTCAGTGAATGTGGAGTTAGAGATGGAGAGGGTGACAGTTACCGGCTACGTTGAGCGGAACAAGGTGCTGAAGGCGGT GAGAAGGTCAGGGAAAAGAGCAGAGTTCTGGCCATACCCAAATCCACCACTTTACTTCACATCTGCTAACAATTACTTCA AAGACACCACAAGTGAGTTCAAAGAAAGCTACAACTACTACAGACATGGCTACAATCTCCCTGAGAGGCATGGCACCATG CATGTGTCTCACCGTGGAGATGACAATGTTAGTAACATGTTCAATGATGATAATGTTAATGCTTGCTCTCTCATGTAA
Protein sequence (LotjaGi5g1v0202500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSLLEKTLGSEISSFIYRCCFIYQDHHHHHHNNKSLKKNFNMGKKSRPLSLQTVELKVRMCCKGCERVVKNAIYKLKGI DSVNVELEMERVTVTGYVERNKVLKAVRRSGKRAEFWPYPNPPLYFTSANNYFKDTTSEFKESYNYYRHGYNLPERHGTM HVSHRGDDNVSNMFNDDNVNACSLM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 185 | 181 | 3.0E-92 | – | |
| PANTHER | 5 | 185 | 181 | 3.0E-92 | – | |
| Gene3D | 42 | 118 | 77 | 1.1E-17 | – | |
| SUPERFAMILY | 51 | 118 | 68 | 6.41E-16 | ||
| CDD | 56 | 115 | 60 | 2.01107E-12 | ||
| Pfam | 58 | 112 | 55 | 7.1E-12 | ||
| ProSiteProfiles | 61 | 116 | 56 | 11.797 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi5g1v0202500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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