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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0205500 |
| Transcript ID | LotjaGi5g1v0205500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | carboxyl-terminal peptidase (DUF239); TAIR: AT5G18460.1 carboxyl-terminal peptidase (DUF239); Swiss-Prot: sp|Q9DDE3|ACES_DANRE Acetylcholinesterase; TrEMBL-Plants: tr|A0A0R0HUJ1|A0A0R0HUJ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0205500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:50783382..50787277) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCAAGCGAAAATATTAATGGCAAAGTGTATGGTGGCAGATACACATTGAAGGAGTGCAATAAAAAGGGAATTGCTTG TTTCAGTTTGGTAGGTTTGGGCTATAAAAATGCTTTAATTTCAACGACTTGTTTCAACTTTGAAGTCACTCATCCATTCT TCTCTTCCTTACAAAGTTTTCCCTCCTCCTAAGATTCAAGGTTTGTTTATTTCCAATTCCAAACAAACAGCATTAGAATT CTATAAACTTCTTCATCATGGACCATCAATACATGAACCATCAAATGCAGTAGCAATCATGATCTTGATGCTGAAGCTTC AAAAGGGTCTCTTAGAATCACCTTAATTGATATCTCACCCACCTCCCCCCTCCCCCCTCACAATAATATTACAAGTCGTT TTCCAACTTGTTTTTTCTTGTTTGTGTTTGTGTAATATTACCCATGAAACACTTCAAATATATTTGTGCTGTTCCCTTTG TTGATAGTTATGACTTTCTAGTGTTTTTAATTAATTTGTCTTACCCATTTTTATTTTGTTGGCACTGAAAGATATGGCTA TTGGTGGGAGAAGAAGGTTCTCCTTTTCTGCTCTTCTTGATCATCATCTTCTCCTTCCAACTTTGTTAATCACCATACTT TTTCAAAGGGCTGTGGCTGATCATGAATCCAATATCTTAAATTACACAAGGCATCGCCAAGTCAGTGGAATGAGACTTGA AAGGATTAGCAGGTACTTGGAGAAGATTAACAAGGCTCCTGTTCTCACCATAGAGGTAATAACATTAATACAAAAAAACT ATATAGTTTGTGATTTTTGTTTTGTACGAAGAAGGAAAAAATAAAGAGAAGTAATACATATAACATATGATATGATATGA TAGGATATGATGTTACTTAAAGAAATATATTTAGAGAAAAATAGATTGTAATGATCACACGTTAATGTCATTCTTCCTTT TTTTTGTTTTCTTTTATGATATTTTTCTTTCTTCTCTATTGCAAAAGTATTAACTATTCTCATTTTTTTCCTTCTTTTGA ATCATATTCTAGAGTCCAGATGGGGATCTCATAGATTGTGTTCACAAAAGAAAACAACTAGCTTTCGATCACCCTCTCTT AAAGAATCATAAGATTCAGGTAAAACCAACTACCTCATTAATTTCTTCACTCTACTTTACTCATTTACTTTATTTATTCT GCTTGTGTAATTTAAATGTGGTATGGACCAATTTGATTATATTTGAAGTTTTGAATGATTTGATTGATGCAACAGAAAGC GCCAACGGAGATGCCAAGAGGGATGAATGTGACAAGAGATGAAAATAGAAACATGGAAGGGGAAGGAGGAAAAGAGAATA GGCCAAAAGAGGCTGTATGGCAAATGTGGCACCGAAATGGAACTTGGTGTCCAAAAGGGACGGTTCCCATACGGCGGAGC ACAGTGGATGATGTGTTGAGAGCAAAGTCTTTGTATGAGTTTGGCAAGAAACCGCCAGGAATGCTTCCTCTCTCTCGCCG TACTGCCAATGTCTCCCCTAATGATATATTCAGCAACAATGATCATGAGGTACATGTTCTCTTTAAATAATGTCGCATAT TCGATGTGAGTAGAAAGAACTTATCTCACAAGAGCGGTGAATATTTCAGCTTGCACATGATTGTTTGGGGTGCCAGAATG TTATTGCTACATTAATACAACTAATTGAATACTATTATACCAATTAGCTAATTAATAATCATTTTTGCCACTTGATGAAT AAGGAAAATTGGCCATAAGATGAATTTTTTTTTCATCACTCAGTAGCTGTATACAGAGACACGGTATCCTTTAAAAAATC AATTATTTTAGAGATAGAATGCTATTTAACATTGCTTTCTTTGCACTTCAACAGTTCAACTCACACTAATAAATGGAGAT TGTGCATTAATTATTAGTTAATTAATTAAAGTGGTCGTGTGTGGTGCATATAAACGCAGCATGCAGTCGCTTACACAGGA TTGGGATCGGATTCGCCACAAGAGATTTACGGAGCAAAAGCATCAATAAACGTGTGGGAGCCATCTATTCAAGTGATGAA CGAGTTCAGCCTCTCACAAATTTGGCTCCTTTCAGGTTTCTTCGATGGTTCTGATCTCAACAGTATCGAAGCTGGGTGGC AGGTACACTCCTTCTAACTTCTAAGTTCTAACTCATTTTATTAATGAATGGATTCAATTAGAAAAAAAATGAGAGAAATT TAGGTGGTGGAGAGTTCGATTTTAAAATAGAAAAAACTCATTAGTCAGCTTCCTAGGGTTAGTATGCTAACAATGATTTG AGTTTCATAGCTATTGGCCAGGAGATCCTTTGGTTAACAATGAAGAAAGATACAAAATTCATTAATGCATGATGGTGGTT TTAATGAATCTTTATTCACATCAAAACTCTTTTTCTTTATTATGATCACTCATTTTCAGTTGTTTCCTTGAAGCAACAGC ATGCAGCCATGCACATTAGTAATATATTGTATATTTGTATTTAATGTTTAATTTATATAGATAGAAATACTAATTAATTT AATGAAAAAAAGTGCATGTCTGAACCTTTGATTATTCTACTAGTCAGGTCAGTCCACAGATCTATGGTGACAGCAGACCC AGATTGTTCACTTATTGGACGGTCAGTATTTCTATTCCTTCTTCTCATTTCTCTTACTCTTCATTCTCTTTCCCTTTTCT TGGGAAATAATAAATGGCAATTATGTATAAGACTGTAAGAGAAAGGGCATTTAAATTCTAGCTATTCAGCTGCAAACATG TGGTGTTTTTAAATGTGTAAAGGTTTTTGGTGATTGATTGCAGAGTGACTCATATGGGAAAACTGGATGTTACAACCTTC TCTGTTCTGGTTTTGTTCAAATCGATAGCAGGATAGCCATTGGAACTGCAATTTCTCCTCTCTCTTCTTATGCTGGCAAC CAATATGAAGTCACCATCCTCATTTGGAAGGTTAATTTCTTCCACACACAAATCTATCAATGTGCTTGAAAACACTTCAT AGCATTGATTTTATAACATATTAGAGCTATTATAAATAACATATATTAGATATTACATTTTATAATAAGTAATAATATGG TTTATGAATAAACCAATTTTTAACATGTGTGACTGGTGACACTTTGAATTAGGATCCAAATGTGGGAAATTGGTGGTTGA GTTATGGTGACAACATATTGGTGGGGTATTGGCCCGCGGAGCTGTTCACGCACCTAGCAGACCACGCCACGGGGGTGGAG TGGGGCGGCGAGGTAGTGAACACACGGGCCAATGATGAACACACGTCCACCCAGATGGGCTCCGGCCACTTTGCCGAGGA TGGTTACGGAAAAGCAAGCTACTTCCGGAACATTGAGATTGTGGACGTGACTAACACTCTTAGATCAGTGCAGAACATCA CAACAATAGCAGAAACCTCGAACTGTTACAACATTCAGACCTCCTACAGCAAGGAATGGGGCACGTATTTCTACTATGGT GGACCTGGGAAAAATCCACAGTGTCCGTGACTATTAAATTAGCTAGTTGCCGTATATATCCATTATCATGGACACAAGAA GTTTTCACTTCCAGTTACTCGTTACTTATACGTAATAACGTAAATGACATAGAATTACTTTGTGCTGTTTCCATTCCTGT TTCTGCCACTTGCTTTTGTTTTTAGTTATGAAGATATATATGAATAATGAATGTAAAAACACGATTGGAAATGGCAAATT TTGAAAGTTGAAGTTTATGCAAGCTTAATTTCTTTTCATATTTTTCTTAGTGTGTAATTTATACAAGCAACAATAATTAG AGTTTATGTTGATGTAAGTATTCTAATAGCTGAGCCAAAACTGACTTTTGTCAAAT
CDS sequence (LotjaGi5g1v0205500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTATTGGTGGGAGAAGAAGGTTCTCCTTTTCTGCTCTTCTTGATCATCATCTTCTCCTTCCAACTTTGTTAATCAC CATACTTTTTCAAAGGGCTGTGGCTGATCATGAATCCAATATCTTAAATTACACAAGGCATCGCCAAGTCAGTGGAATGA GACTTGAAAGGATTAGCAGGTACTTGGAGAAGATTAACAAGGCTCCTGTTCTCACCATAGAGAGTCCAGATGGGGATCTC ATAGATTGTGTTCACAAAAGAAAACAACTAGCTTTCGATCACCCTCTCTTAAAGAATCATAAGATTCAGAAAGCGCCAAC GGAGATGCCAAGAGGGATGAATGTGACAAGAGATGAAAATAGAAACATGGAAGGGGAAGGAGGAAAAGAGAATAGGCCAA AAGAGGCTGTATGGCAAATGTGGCACCGAAATGGAACTTGGTGTCCAAAAGGGACGGTTCCCATACGGCGGAGCACAGTG GATGATGTGTTGAGAGCAAAGTCTTTGTATGAGTTTGGCAAGAAACCGCCAGGAATGCTTCCTCTCTCTCGCCGTACTGC CAATGTCTCCCCTAATGATATATTCAGCAACAATGATCATGAGCATGCAGTCGCTTACACAGGATTGGGATCGGATTCGC CACAAGAGATTTACGGAGCAAAAGCATCAATAAACGTGTGGGAGCCATCTATTCAAGTGATGAACGAGTTCAGCCTCTCA CAAATTTGGCTCCTTTCAGGTTTCTTCGATGGTTCTGATCTCAACAGTATCGAAGCTGGGTGGCAGGTCAGTCCACAGAT CTATGGTGACAGCAGACCCAGATTGTTCACTTATTGGACGAGTGACTCATATGGGAAAACTGGATGTTACAACCTTCTCT GTTCTGGTTTTGTTCAAATCGATAGCAGGATAGCCATTGGAACTGCAATTTCTCCTCTCTCTTCTTATGCTGGCAACCAA TATGAAGTCACCATCCTCATTTGGAAGGATCCAAATGTGGGAAATTGGTGGTTGAGTTATGGTGACAACATATTGGTGGG GTATTGGCCCGCGGAGCTGTTCACGCACCTAGCAGACCACGCCACGGGGGTGGAGTGGGGCGGCGAGGTAGTGAACACAC GGGCCAATGATGAACACACGTCCACCCAGATGGGCTCCGGCCACTTTGCCGAGGATGGTTACGGAAAAGCAAGCTACTTC CGGAACATTGAGATTGTGGACGTGACTAACACTCTTAGATCAGTGCAGAACATCACAACAATAGCAGAAACCTCGAACTG TTACAACATTCAGACCTCCTACAGCAAGGAATGGGGCACGTATTTCTACTATGGTGGACCTGGGAAAAATCCACAGTGTC CGTGA
Protein sequence (LotjaGi5g1v0205500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIGGRRRFSFSALLDHHLLLPTLLITILFQRAVADHESNILNYTRHRQVSGMRLERISRYLEKINKAPVLTIESPDGDL IDCVHKRKQLAFDHPLLKNHKIQKAPTEMPRGMNVTRDENRNMEGEGGKENRPKEAVWQMWHRNGTWCPKGTVPIRRSTV DDVLRAKSLYEFGKKPPGMLPLSRRTANVSPNDIFSNNDHEHAVAYTGLGSDSPQEIYGAKASINVWEPSIQVMNEFSLS QIWLLSGFFDGSDLNSIEAGWQVSPQIYGDSRPRLFTYWTSDSYGKTGCYNLLCSGFVQIDSRIAIGTAISPLSSYAGNQ YEVTILIWKDPNVGNWWLSYGDNILVGYWPAELFTHLADHATGVEWGGEVVNTRANDEHTSTQMGSGHFAEDGYGKASYF RNIEIVDVTNTLRSVQNITTIAETSNCYNIQTSYSKEWGTYFYYGGPGKNPQCP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| SignalP_EUK | 1 | 35 | 35 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| PANTHER | 18 | 454 | 437 | 3.5E-226 | – | |
| PANTHER | 18 | 454 | 437 | 3.5E-226 | – | |
| Phobius | 19 | 30 | 12 | - | – | |
| Phobius | 31 | 35 | 5 | - | – | |
| Phobius | 36 | 454 | 419 | - | – | |
| Pfam | 72 | 206 | 135 | 8.5E-43 | ||
| MobiDBLite | 111 | 132 | 22 | - | – | |
| MobiDBLite | 114 | 132 | 19 | - | – | |
| Pfam | 224 | 447 | 224 | 2.3E-89 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0205500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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